CF831977
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_DESVV (50S ribosomal protein L14 OS=Desulfovibrio vulgaris subsp. vulgaris (strain DP4) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11 Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = -1 Query: 167 VAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 466 V +T+ ADN+GAK + I V G + R A VGD++M +VK+ P + K VM +VIVR K R DG ++ F+ NA V++N +GE G+ I GP+ Sbjct: 4 VESTLQVADNSGAKKVACIKVLGGSHRRY----ATVGDIIMVSVKEAMPHCKVKKGDVMQAVIVRTAKEVRRADGSYIKFDSNAAVLLNKQGEPVGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_DESVH (50S ribosomal protein L14 OS=Desulfovibrio vulgaris (strain Hildenborough / ATCC 29579 / NCIMB 8303) GN=rplN PE=3 SV=1) HSP 1 Score: 68.9366 bits (167), Expect = 1.215e-11 Identity = 42/103 (40.78%), Postives = 61/103 (59.22%), Query Frame = -1 Query: 167 VAATVNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 466 V +T+ ADN+GAK + I V G + R A VGD++M +VK+ P + K VM +VIVR K R DG ++ F+ NA V++N +GE G+ I GP+ Sbjct: 4 VESTLQVADNSGAKKVACIKVLGGSHRRY----ATVGDIIMVSVKEAMPHCKVKKGDVMQAVIVRTAKEVRRADGSYIKFDSNAAVLLNKQGEPVGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_CHLPB (50S ribosomal protein L14 OS=Chlorobium phaeobacteroides (strain BS1) GN=rplN PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.587e-11 Identity = 41/96 (42.71%), Postives = 59/96 (61.46%), Query Frame = -1 Query: 167 ADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPD---LRKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 445 ADN+GAK + I V G TGR A +GD +M TVK P +K+V +V+VR K RKDG ++ F++NA V++N +GE +G+ I GP+ Sbjct: 11 ADNSGAKKVRCIHVFGGTGRRY----ASLGDQIMVTVKAAVPGGVVKKKEVTKAVVVRCAKEKRRKDGSYIRFDENAVVLLNAQGEPRGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_ANGEV (50S ribosomal protein L14, chloroplastic OS=Angiopteris evecta GN=rpl14 PE=3 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 1.587e-11 Identity = 37/99 (37.37%), Postives = 62/99 (62.63%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GA+ L I V G + R A GD+++A VK+ P++ + +V+ +V+VR CK R +G+ + F+DNA V++N +G +G+ + GPI Sbjct: 8 LNVADNSGARKLMCIRVLGTSDR----EYADTGDVIVAVVKEAVPNMPLKKSEVVRAVVVRTCKELKRDNGMRIRFDDNAAVVINQEGNPRGTRVFGPI 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RL14_SYNFM (50S ribosomal protein L14 OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=rplN PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11 Identity = 40/99 (40.40%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDLRKK---VMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GAK LY I V G T R A VGD+++ +VK+ P+ + K V+ +V+VR K R DG ++ F+DN+ V++N E G+ I GP+ Sbjct: 8 LNAADNSGAKRLYCIKVLGGT----RKRYASVGDIIVVSVKEAIPNAKVKKGDVLKAVVVRTQKEVRRPDGSYIKFDDNSAVLINQAKEPIGTRIFGPV 102
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_WHEAT (50S ribosomal protein L14, chloroplastic OS=Triticum aestivum GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11 Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ +VIVR CK + +DG+ + ++DNA VI++ KG +G+ + G I Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQ---RYARIGDVIVAVIKDALPQMPLERSEVIRAVIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAI 103
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_LOLPR (50S ribosomal protein L14, chloroplastic OS=Lolium perenne GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11 Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ +VIVR CK + +DG+ + ++DNA VI++ KG +G+ + G I Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQ---RYARIGDVIVAVIKDALPQMPLERSEVIRAVIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAI 103
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_HORVU (50S ribosomal protein L14, chloroplastic OS=Hordeum vulgare GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11 Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ +VIVR CK + +DG+ + ++DNA VI++ KG +G+ + G I Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQ---RYARIGDVIVAVIKDALPQMPLERSEVIRAVIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAI 103
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_BRADI (50S ribosomal protein L14, chloroplastic OS=Brachypodium distachyon GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11 Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ +VIVR CK + +DG+ + ++DNA VI++ KG +G+ + G I Sbjct: 8 LNVADNSGARKLMCIRVIGTAGNQ---RYARIGDVIVAVIKDAVPQMPLERSEVIRAVIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAI 103
BLAST of CF831977 vs. ExPASy Swiss-Prot
Match: RK14_AGRST (50S ribosomal protein L14, chloroplastic OS=Agrostis stolonifera GN=rpl14 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.536e-11 Identity = 37/99 (37.37%), Postives = 60/99 (60.61%), Query Frame = -1 Query: 167 VNCADNTGAKTLYIISVKGITGRLIRLPSACVGDMVMATVKKGKPDL---RKKVMPSVIVRQCKPWCRKDGVFMYFEDNAGVIVNPKGEMQGSAITGPI 454 +N ADN+GA+ L I V G G A +GD+++A +K P + R +V+ +VIVR CK + +DG+ + ++DNA VI++ KG +G+ + G I Sbjct: 8 LNVADNSGARKLMCIRVIGAAGNQ---RYARIGDVIVAVIKDALPQMPLERSEVIRAVIVRTCKEFKCEDGIIIRYDDNAAVIIDQKGNPKGTRVFGAI 103 The following BLAST results are available for this feature:
BLAST of CF831977 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 117
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831977 ID=CF831977; Name=CF831977; organism=Citrus sinensis; type=EST; length=469bpback to top |