CF831984
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831984 vs. ExPASy Swiss-Prot
Match: RS9A_SCHPO (40S ribosomal protein S9-A OS=Schizosaccharomyces pombe GN=rps9a PE=1 SV=2) HSP 1 Score: 244.202 bits (622), Expect = 5.816e-64 Identity = 116/168 (69.05%), Postives = 145/168 (86.31%), Query Frame = -1 Query: 254 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMVKSIPHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRNI 757 KT+K PRRP+E RLDAEL+L GEYGLR K E+WRV LS+IR AAR+LLTLDEK+P+R+FEG A++RR+ R G L+E++ KLDYVLAL +E+FLERRLQT VFK G+ KSI HARVLI QRHIRVG+Q+VN+PSFVVR+D+QKHI+F+L+SP+GGGRPGR KR+ + Sbjct: 10 KTYKVPRRPFESARLDAELKLAGEYGLRNKHEIWRVALTLSKIRRAARELLTLDEKDPKRLFEGNAIIRRLVRLGILDETRMKLDYVLALRIEDFLERRLQTQVFKLGLAKSIHHARVLIFQRHIRVGKQIVNVPSFVVRLDTQKHIDFALSSPYGGGRPGRCKRKRL 177
BLAST of CF831984 vs. ExPASy Swiss-Prot
Match: RS9_DICDI (40S ribosomal protein S9 OS=Dictyostelium discoideum GN=rps9 PE=2 SV=1) HSP 1 Score: 240.736 bits (613), Expect = 6.430e-63 Identity = 114/166 (68.67%), Postives = 144/166 (86.75%), Query Frame = -1 Query: 260 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMVKSIPHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRR 757 KT PRRP+EKER+DAEL++VGE+GL+ K E+WRVQYAL++IR AAR+LL LDEK+P+RIFEG ALLRR+H+ G +EES+NKLDY+L L V++F+ERRLQTLVFK+G+ KSI HARVLI+ RHIRVG+QLVN+PSF+VRV+SQKH+ + TSP GGRPGR R+ Sbjct: 7 KTSHTPRRPFEKERIDAELKVVGEFGLKNKNEVWRVQYALAKIRKAARELLVLDEKDPKRIFEGSALLRRLHKLGVMEESKNKLDYILNLKVQDFMERRLQTLVFKNGLAKSIHHARVLIKGRHIRVGKQLVNVPSFLVRVESQKHLGLASTSPLAGGRPGRRARK 172
BLAST of CF831984 vs. ExPASy Swiss-Prot
Match: RS9_CAEEL (40S ribosomal protein S9 OS=Caenorhabditis elegans GN=rps-9 PE=2 SV=1) HSP 1 Score: 239.195 bits (609), Expect = 1.871e-62 Identity = 112/168 (66.67%), Postives = 145/168 (86.31%), Query Frame = -1 Query: 254 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMVKSIPHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRNI 757 K K PRRP+EKERLD EL+L+G +GL+ KRE+WRV+Y L+++R AAR+LLTL++K+P+R+FEG ALLRR+ + G L+E++ KLDYVL L VE+FLERRLQT VFK G+ KSI HAR+LI+Q HIRV RQ+V++PSF+VR+DSQKHI+FSL SP+GGGRPGRVKRR + Sbjct: 10 KVTKSPRRPFEKERLDQELKLIGTFGLKNKREVWRVKYTLAKVRKAARELLTLEDKDPKRLFEGNALLRRLVKIGVLDETKMKLDYVLGLKVEDFLERRLQTQVFKLGLAKSIHHARILIKQHHIRVRRQVVDVPSFIVRLDSQKHIDFSLQSPYGGGRPGRVKRRTL 177
BLAST of CF831984 vs. ExPASy Swiss-Prot
Match: RS9B_YEAST (40S ribosomal protein S9-B OS=Saccharomyces cerevisiae GN=RPS9B PE=1 SV=4) HSP 1 Score: 236.113 bits (601), Expect = 1.584e-61 Identity = 113/167 (67.66%), Postives = 140/167 (83.83%), Query Frame = -1 Query: 257 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMVKSIPHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 757 KT+ P+RPYE RLDAEL+L GE+GL+ KRE++R+ + LS+IR AARDLLT DEK+P+R+FEG AL+RR+ R G L E + KLDYVLAL VE+FLERRLQT V+K G+ KS+ HARVLI QRHI VG+Q+VNIPSF+VR+DS+KHI+F+ TSPFGG RPGRV RRN Sbjct: 10 KTYSTPKRPYESSRLDAELKLAGEFGLKNKREIYRISFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRN 176
BLAST of CF831984 vs. ExPASy Swiss-Prot
Match: RS9A_YEAST (40S ribosomal protein S9-A OS=Saccharomyces cerevisiae GN=RPS9A PE=1 SV=3) HSP 1 Score: 234.958 bits (598), Expect = 3.528e-61 Identity = 112/167 (67.07%), Postives = 140/167 (83.83%), Query Frame = -1 Query: 257 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMVKSIPHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKRRN 757 KT+ P+RPYE RLDAEL+L GE+GL+ K+E++R+ + LS+IR AARDLLT DEK+P+R+FEG AL+RR+ R G L E + KLDYVLAL VE+FLERRLQT V+K G+ KS+ HARVLI QRHI VG+Q+VNIPSF+VR+DS+KHI+F+ TSPFGG RPGRV RRN Sbjct: 10 KTYSTPKRPYESSRLDAELKLAGEFGLKNKKEIYRISFQLSKIRRAARDLLTRDEKDPKRLFEGNALIRRLVRVGVLSEDKKKLDYVLALKVEDFLERRLQTQVYKLGLAKSVHHARVLITQRHIAVGKQIVNIPSFMVRLDSEKHIDFAPTSPFGGARPGRVARRN 176
BLAST of CF831984 vs. ExPASy Swiss-Prot
Match: RS9_TRYBB (Probable 40S ribosomal protein S9 OS=Trypanosoma brucei brucei PE=3 SV=1) HSP 1 Score: 226.098 bits (575), Expect = 1.639e-58 Identity = 106/165 (64.24%), Postives = 134/165 (81.21%), Query Frame = -1 Query: 263 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMVKSIPHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGRPGRVKR 757 + +K PRRP+EKERLD E++L G+YGLRCKRE+WRV LS++R AR LLTL E +PRR+ EG A++RR H YGFL+E ++KLDYVL+LTV + LERRLQT+VFK G+ KS+ H+RVLI+QRHI V +Q+V IPSF+VRV S+ HI F+ SPFG GRPGRVKR Sbjct: 9 RVWKAPRRPFEKERLDREMKLCGQYGLRCKREIWRVNMTLSKMRRTARLLLTLPENHPRRLLEGSAIMRRCHGYGFLDEDKDKLDYVLSLTVPDILERRLQTVVFKHGLAKSVHHSRVLIQQRHIAVAKQIVTIPSFIVRVSSEHHIAFADASPFGNGRPGRVKR 173
BLAST of CF831984 vs. ExPASy Swiss-Prot
Match: RS9_NAEFO (40S ribosomal protein S9 OS=Naegleria fowleri GN=RPS9 PE=2 SV=1) HSP 1 Score: 196.438 bits (498), Expect = 1.391e-49 Identity = 98/164 (59.76%), Postives = 128/164 (78.05%), Query Frame = -1 Query: 254 PRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMVKSIPHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFS-LTSPFGGGRPGRVKRRNI 742 PRRP+EKER+D EL++ G+YGL+ K+E+WR+QY L+R R AR LLTL E + +R FEG ALLRRM R G L+ES+ +LDY+L+L E+ LERRLQT+V K G+ KSI HAR LI QRHIRVG+Q VN+PSF+VRVDS+KHI S ++ GG+PGR+ R+ + Sbjct: 17 PRRPFEKERMDRELKMCGKYGLKNKQEIWRLQYYLARARKTARHLLTLPEDDMKRQFEGAALLRRMTRLGLLDESKQQLDYILSLKTEDLLERRLQTVVQKLGLSKSIHHARQLIFQRHIRVGKQTVNVPSFIVRVDSEKHINMSPFSALVQGGKPGRMTRKKL 180
BLAST of CF831984 vs. ExPASy Swiss-Prot
Match: RS9_ENTHI (40S ribosomal protein S9 OS=Entamoeba histolytica GN=2.t00127 PE=2 SV=2) HSP 1 Score: 176.792 bits (447), Expect = 1.140e-43 Identity = 89/167 (53.29%), Postives = 122/167 (73.05%), Query Frame = -1 Query: 257 TFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMVKSIPHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPFGGGR-PGRVKRRN 754 T+K P+ PYE+ER DAEL+LVG++GL+ K+E+ RV Y L +R A+ +L D K+P+R+ EG ALLRR+H G L QNKL++VLAL EN LERRLQTLV++ G KSI HARVLIR + I+VG+Q+V++PSF+VRV+S+ I+ + +P GR KR+N Sbjct: 11 TYKTPKVPYERERFDAELKLVGQFGLKNKKEIQRVHYMLGHMRTIAKVMLMKDAKDPKRLLEGAALLRRLHNLGILPRDQNKLEFVLALKEENLLERRLQTLVYRKGFAKSIHHARVLIRGKMIKVGKQVVDVPSFLVRVESEPLIQLADNTPLTNPEINGRRKRKN 177
BLAST of CF831984 vs. ExPASy Swiss-Prot
Match: RS9_PIG (40S ribosomal protein S9 (Fragment) OS=Sus scrofa GN=RPS9 PE=2 SV=1) HSP 1 Score: 169.474 bits (428), Expect = 1.820e-41 Identity = 82/122 (67.21%), Postives = 101/122 (82.79%), Query Frame = -1 Query: 392 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMVKSIPHARVLIRQ 757 KT+ PRRP+EK RLD EL+L+GEYGLR KRE+WRV++ L++IR AAR+LLTLDEK+PRR+FEG ALLRR+ R G L+E + KLDY+L L +E+FLERRLQT VFK G+ SI H RVLIRQ Sbjct: 9 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRRLFEGNALLRRLVRIGVLDEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAXSIHHXRVLIRQ 130
BLAST of CF831984 vs. ExPASy Swiss-Prot
Match: RS4_IGNH4 (30S ribosomal protein S4P OS=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) GN=rps4p PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 3.937e-28 Identity = 69/155 (44.52%), Postives = 101/155 (65.16%), Query Frame = -1 Query: 293 KTFKKPRRPYEKERLDAELRLVGEYGLRCKRELWRVQYALSRIRNAARDLLTLDEKNPRRIFEGEALLRRMHRYGFLEESQNKLDYVLALTVENFLERRLQTLVFKSGMVKSIPHARVLIRQRHIRVGRQLVNIPSFVVRVDSQKHIEFSLTSPF 757 K + P P+ KERL E++L+GEYGLR KRE+W L R R+ AR+LL L + + E +ALL+R++ G ++E+ LD VL+LTV + LERRLQT+V+K G+ KSI HAR L+ HI + + V P ++VR D ++ I ++ TSP+ Sbjct: 9 KKWSPPGHPWVKERLIEEMKLMGEYGLRNKREIWIAAAMLRRYRHRARELLALPAEVREK--EEKALLKRLYDLGLVDENAT-LDDVLSLTVRDLLERRLQTVVYKKGLAKSIYHARQLVTHGHIAINGRRVTSPGYIVRRDEEELIGYAPTSPY 160 The following BLAST results are available for this feature:
BLAST of CF831984 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 84
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831984 ID=CF831984; Name=CF831984; organism=Citrus sinensis; type=EST; length=760bpback to top |