CF831987
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831987 vs. ExPASy Swiss-Prot
Match: RIA1_YEAST (Ribosome assembly protein 1 OS=Saccharomyces cerevisiae GN=RIA1 PE=1 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.746e-17 Identity = 60/185 (32.43%), Postives = 91/185 (49.19%), Query Frame = -2 Query: 410 EGALAEENMRGICFEVCDV-VLHADAIHRG------------GGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQL-----VAD-----------IRKRKGL 877 EG LA E ++G+C V V + D I G++I + R I+ + L PR++ +Y +IQ LG +Y+V+ Q+ G + E + GTP + I+A++PV+E+FG S +R TSG A PQ VF ++ + DP T +L AD IR+RKGL Sbjct: 907 EGPLANEPVQGMCVLVESVHKMSQDEIESIEDPRYQQHIVDLSGRLITSTRDAIHEAFLDWSPRIMWAIYSCDIQTSVDVLGKVYAVILQRHGKIISEEMKEGTPFFQIEAHVPVVEAFGLSEDIRKRTSGAAQPQLVFSGFECIDLDPFWVPTTEEELEELGDTADRENIARKHMNAIRRRKGL 1091
BLAST of CF831987 vs. ExPASy Swiss-Prot
Match: EF2_THEGJ (Elongation factor 2 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=fusA PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 8.746e-17 Identity = 55/156 (35.26%), Postives = 82/156 (52.56%), Query Frame = -2 Query: 410 EGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGL 877 EG LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + LNQ+RG + +M++ G + I PV E FGF+G +R ATSG+A +H + P A Q++ IR+RKGL Sbjct: 571 EGPLAKEPVMKVIVRLHDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGAVSRELNQRRGQLI-DMRQEGEVMI-IIGEAPVAEMFGFAGAIRGATSGKAL--WTTEH----AGFKRVPNELAQQIIRQIRQRKGL 718
BLAST of CF831987 vs. ExPASy Swiss-Prot
Match: EF2_METTH (Elongation factor 2 OS=Methanobacterium thermoautotrophicum GN=fusA PE=3 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 8.746e-17 Identity = 47/159 (29.56%), Postives = 83/159 (52.20%), Query Frame = -2 Query: 401 GALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGLKEQ 874 G +A+E + G+ ++ D +H DA+HRG QV+P R+ I+ + ++A+P LLEP+ V I P+ +G + +RG + Q + +++ +PV E FGF+G +R+AT G+ W ++ P + ++R RKGL + Sbjct: 572 GPVAKEKVMGVKIKLMDAKIHEDAVHRGPAQVLPAIRKGIFGAMMSAEPVLLEPIQKVFINVPQDYMGSATREIQNRRGQIVNMTQE--GDMVTVESTVPVAEMFGFAGDIRSATEGRCL-------WSTENAGFERLPNELQHTITREVRTRKGLSPE 721
BLAST of CF831987 vs. ExPASy Swiss-Prot
Match: EF2_THEON (Elongation factor 2 OS=Thermococcus onnurineus (strain NA1) GN=fusA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16 Identity = 54/157 (34.39%), Postives = 81/157 (51.59%), Query Frame = -2 Query: 410 EGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 877 EG LA+E + + + D +H D +HRG Q+ P R I+ + + A P L EP V I P + +G + +NQ+RG + +M++ G + I + PV E FGF+G LR ATSG+A W + P A ++ IR+RKGL Sbjct: 571 EGPLAKEPVMKVMVRLHDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKAGPVLYEPYQKVIINIPYEYMGSVSREINQRRGQLI-DMRQEGEVMI-IISEAPVAEMFGFAGALRGATSGKAL-------WSTEHAGFKRVPNELAVNIIRQIRQRKGL 718
BLAST of CF831987 vs. ExPASy Swiss-Prot
Match: EF2_PYRHO (Elongation factor 2 OS=Pyrococcus horikoshii GN=fusA PE=3 SV=2) HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16 Identity = 53/157 (33.76%), Postives = 82/157 (52.23%), Query Frame = -2 Query: 410 EGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 877 EG LA E + + + D +H D +HRG Q+ P R I+ + + + P L EP V I P + +G + + Q+RG + +M++ G + I A PV E FGF+G++R+ATSG+A W + P A Q++ IR+RKGL Sbjct: 571 EGPLAREPVMKVIVRLLDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQLV-DMKQEG-EVMTIIAEAPVAEMFGFAGSIRSATSGRAL-------WSTEHAGFKRVPNELAQQIIRQIRQRKGL 718
BLAST of CF831987 vs. ExPASy Swiss-Prot
Match: EF2_PYRAB (Elongation factor 2 OS=Pyrococcus abyssi GN=fusA PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.492e-16 Identity = 53/157 (33.76%), Postives = 82/157 (52.23%), Query Frame = -2 Query: 410 EGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 877 EG LA+E + + + D +H D +HRG Q+ P R I+ + + + P L EP V I P + +G + + Q+RG + +M++ G + I A PV E FGF+G +R+ATSG+A W + P A Q++ IR+RKGL Sbjct: 571 EGPLAKEPVMKVIVRLIDAQVHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVIINIPYEYMGAVSREITQRRGQLV-DMKQEG-EVMTIIAEAPVAEMFGFAGAIRSATSGRAL-------WSTEHAGFKRVPNELAQQIIRQIRQRKGL 718
BLAST of CF831987 vs. ExPASy Swiss-Prot
Match: EF2_THESM (Elongation factor 2 OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=fusA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16 Identity = 52/157 (33.12%), Postives = 80/157 (50.96%), Query Frame = -2 Query: 410 EGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSD-PLEPGTQAAQLVADIRKRKGL 877 EG LA E + + + D +H D +HRG Q+ P R I+ + + + P L EP V I P + +G + +NQ+RG + +M++ G + I + PV E FGF+G +R ATSG+A W + P A ++ IR+RKGL Sbjct: 571 EGPLAREPVMKVIVRLVDAKIHEDNVHRGPAQIYPAIRTAIHCAMMKSNPVLYEPYQKVVINVPYEYMGSVSREMNQRRGQLI-DMRQEGEVMI-IISEAPVAEMFGFAGAIRGATSGRAL-------WSTEHAGFKRVPTELAINIIRQIRQRKGL 718
BLAST of CF831987 vs. ExPASy Swiss-Prot
Match: EF2_HALSA (Elongation factor 2 OS=Halobacterium salinarium GN=fusA PE=3 SV=2) HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16 Identity = 55/160 (34.38%), Postives = 87/160 (54.37%), Query Frame = -2 Query: 398 EGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQM 877 +G LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V ++M + G L ++ PV E GFS +R+AT G+A + +M +D L+ +++ +IR+RKG+K ++ Sbjct: 570 DGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRV-DDMYQEG-DLMVVEGIAPVDEMIGFSSDIRSATEGRASWNTENAGFRVM-ADNLQ-----REIIMEIRERKGMKTEL 721
BLAST of CF831987 vs. ExPASy Swiss-Prot
Match: EF2_HALS3 (Elongation factor 2 OS=Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1) GN=fusA PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 3.324e-16 Identity = 55/160 (34.38%), Postives = 87/160 (54.37%), Query Frame = -2 Query: 398 EGALAEENMRGICFEVCDVVLHADAIHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDHWDMMSSDPLEPGTQAAQLVADIRKRKGLKEQM 877 +G LA E + G + D LH DAIHRG QVIP R ++ + + A RLLEP+ V I P + +G + +RG V ++M + G L ++ PV E GFS +R+AT G+A + +M +D L+ +++ +IR+RKG+K ++ Sbjct: 570 DGPLAAEPVEGALIRLHDARLHEDAIHRGPAQVIPATRDAVHRALIDADIRLLEPIQDVRIDVPSEHMGAASGEVQGRRGRV-DDMYQEG-DLMVVEGIAPVDEMIGFSSDIRSATEGRASWNTENAGFRVM-ADNLQ-----REIIMEIRERKGMKTEL 721
BLAST of CF831987 vs. ExPASy Swiss-Prot
Match: SN114_YEAST (114 kDa U5 small nuclear ribonucleoprotein component OS=Saccharomyces cerevisiae GN=SNU114 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 6.268e-15 Identity = 55/172 (31.98%), Postives = 89/172 (51.74%), Query Frame = -2 Query: 410 EGALAEENMRGICFEVCDVVLHADA-IHRGGGQVIPTARRVIYASQLTAKPRLLEPVYMVEIQAPEQALGGIYSVLNQKRG-HVFEEMQRPGTPLYNIKAYLPVIESFGFSGTLRAATSGQAFPQCVFDH--W-----DMMSSDPLEPGTQAAQL-------VADIRKRKGL 877 EG LAEE + G+ +++ + + +D I Q+IP ++ Y LTA P LLEP+Y V+I L + ++ ++RG +++ ++ GTPL ++ +PVIES GF LR +T+G Q F H W D++ D P + A + V R+RKG+ Sbjct: 805 EGPLAEEPIYGVQYKLLSISVPSDVNIDVMKSQIIPLMKKACYVGLLTAIPILLEPIYEVDITVHAPLLPIVEELMKKRRGSRIYKTIKVAGTPLLEVRGQVPVIESAGFETDLRLSTNGLGMCQLYFWHKIWRKVPGDVLDKDAFIPKLKPAPINSLSRDFVMKTRRRKGI 976 The following BLAST results are available for this feature:
BLAST of CF831987 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 100
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831987 ID=CF831987; Name=CF831987; organism=Citrus sinensis; type=EST; length=878bpback to top |