CF831988

Overview
NameCF831988
Unique NameCF831988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1001 contig Csv1_Contig1001:1..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_BOVIN (Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=3)

HSP 1 Score: 298.516 bits (763), Expect = 2.271e-80
Identity = 151/233 (64.81%), Postives = 181/233 (77.68%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E +EDVPCGN V +VG+DQF+ K  T+T  +   AH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S    +SKSPNKHNRLYM+ARP  +GLAE ID G +  R + K R++ L+E++ WD   A+KIWCFGP+ TGPN+  D+ KGVQYLNEIKDSVVA
Sbjct:  452 LMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTGTITTFEH--AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQYLNEIKDSVVA 681          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_BOMMO (Translation elongation factor 2 OS=Bombyx mori GN=tef2 PE=1 SV=1)

HSP 1 Score: 296.975 bits (759), Expect = 6.609e-80
Identity = 151/233 (64.81%), Postives = 184/233 (78.97%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E +EDVP GN   +VG+DQF+ K  T+T  K  +AH ++ MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C  EESGEHIVAGAGELHLEICLKDL++D      I KSDPVVS+RETV E+S +  +SKSPNKHNRL+M+A+P+ +GL E ID+GR+ PRDD K R++ L+E++ +D   A+KIWCFGPE TGPN+ VD  KGVQYLNEIKDSVVA
Sbjct:  438 LMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFK--NAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCINEESGEHIVAGAGELHLEICLKDLEEDH-ACIPIKKSDPVVSYRETVAEESDQLCLSKSPNKHNRLFMKAQPMPDGLPEDIDEGRVNPRDDFKTRARYLTEKYEYDVTEARKIWCFGPEGTGPNILVDCSKGVQYLNEIKDSVVA 667          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_CRYPV (Elongation factor 2 OS=Cryptosporidium parvum PE=3 SV=1)

HSP 1 Score: 289.271 bits (739), Expect = 1.378e-77
Identity = 137/229 (59.83%), Postives = 182/229 (79.48%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKD 691
            + MG+  E + DVP GNTV +VG+DQ++ K+ T+T  +   AH I +MK+SVSPVVRVAV+ K   +LPKLVEGLK+L+KSDP+VVC+ EE+GEHI+AG GELH+EICL+DLQ ++    EI+ SDP+VS+RETV+  S +T +SKSPNKHNRLYM A PL +GL + I++G++ PRDDPK RS +L +++G+DK+ A KIWCFGPETTGPN+ VD+  G+QYL EIKD
Sbjct:  426 LMMGRYVEQIPDVPAGNTVGLVGIDQYLLKSGTITTSET--AHNIASMKYSVSPVVRVAVRPKDNKELPKLVEGLKKLSKSDPLVVCSKEETGEHIIAGCGELHVEICLQDLQQEY-AQIEIVASDPIVSYRETVVNLSNQTCLSKSPNKHNRLYMTAEPLPDGLTDDIEEGKVSPRDDPKERSNLLHDKYGFDKNAAMKIWCFGPETTGPNIMVDVTTGIQYLTEIKD 651          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_SCHPO (Elongation factor 2 OS=Schizosaccharomyces pombe GN=eft1 PE=1 SV=2)

HSP 1 Score: 288.115 bits (736), Expect = 3.070e-77
Identity = 143/233 (61.37%), Postives = 178/233 (76.39%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG + E +ED P GN + +VG+DQF+ K+ TLT  +   AH ++ MKFSVSPVV+VAV+ K  +DLPKLVEGLKRL+KSDP V+CT  ESGEHIVAGAGELHLEICLKDLQ+D   G  +  S PVVS+RE+V E S  T +SKSPNKHNR++M A P+ E L+ AI+ G + PRDD K R++I+++EFGWD   A+KIWCFGP+TTG N+ VD  K V YLNEIKDSVVA
Sbjct:  436 LMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSGTLTTSEV--AHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAGELHLEICLKDLQEDH-AGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVAYLNEIKDSVVA 665          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_CAEEL (Elongation factor 2 OS=Caenorhabditis elegans GN=eft-2 PE=2 SV=4)

HSP 1 Score: 288.115 bits (736), Expect = 3.070e-77
Identity = 144/233 (61.80%), Postives = 182/233 (78.11%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E +ED+P GN   +VG+DQ++ K  T+T  K  DAH +R MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C  EESGEHI+AGAGELHLEICLKDL++D      + KSDPVVS+RETV  +S +  +SKSPNKHNRL+  A+P+ +GLA+ I+ G +  RD+ KAR+KIL+E++ +D   A+KIWCFGP+ TGPN+ +D+ KGVQYLNEIKDSVVA
Sbjct:  446 LMMGRFIEPIEDIPSGNIAGLVGVDQYLVKGGTITTYK--DAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEESGEHIIAGAGELHLEICLKDLEEDH-ACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMPDGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGVQYLNEIKDSVVA 675          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_DROME (Elongation factor 2 OS=Drosophila melanogaster GN=Ef2b PE=1 SV=4)

HSP 1 Score: 286.574 bits (732), Expect = 8.932e-77
Identity = 146/233 (62.66%), Postives = 180/233 (77.25%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E +EDVP GN   +VG+DQF+ K  T+T  K  DAH ++ MKFSVSPVVRVAV+ K  +DLPKLVEGLKRLAKSDPMV C IEESGEHI+AGAGELHLEICLKDL++D      + KSDPVVS+RETV E+S +  +SKSPNKHNRL M+A P+ +GL E ID+G +  +D+ KAR++ LSE++ +D   A+KIWCFGP+ TGPN  +D  K VQYLNEIKDSVVA
Sbjct:  438 LMMGRYVEAIEDVPSGNICGLVGVDQFLVKTGTITTFK--DAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAGELHLEICLKDLEEDH-ACIPLKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLLMKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQYLNEIKDSVVA 667          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_ENTHI (Elongation factor 2 OS=Entamoeba histolytica GN=EF-2 PE=2 SV=1)

HSP 1 Score: 286.189 bits (731), Expect = 1.167e-76
Identity = 136/232 (58.62%), Postives = 178/232 (76.72%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700
            + MG+  + +++ PCGN + +VG+DQ++ K+ T+T+     AH I+ MKFSVSPVVRVAV+ K  SDLPKLVEG+KRL++SDP+ +C  EESGEHIVAGAGELHLE+CLK+LQ+D+  G  +I ++PVVSFRET+ E S    +SKS N  NRL+M A P  EGLAE I+ G I P  D K R+K LSE++GWD D A+KIWCFGP+  GPN+FVD+ KG+QYLNE+KDS+V
Sbjct:  434 LMMGRYTDPIDECPCGNVIGLVGVDQYLLKSGTITDSV---AHIIKDMKFSVSPVVRVAVETKNPSDLPKLVEGMKRLSRSDPLCLCYTEESGEHIVAGAGELHLEVCLKELQEDYCSGVPLIVTEPVVSFRETITEPSRIQCLSKSANNQNRLFMRAFPFPEGLAEDIEAGEIKPDTDFKERAKFLSEKYGWDVDEARKIWCFGPDNCGPNLFVDVTKGIQYLNEVKDSIV 662          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_NEUCR (Elongation factor 2 OS=Neurospora crassa GN=cot-3 PE=3 SV=3)

HSP 1 Score: 282.722 bits (722), Expect = 1.290e-75
Identity = 144/233 (61.80%), Postives = 176/233 (75.54%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG K E ++D+P GN V +VG+DQF+ K+ TLT  +   AH ++ MKFSVSPVV+ +VQ K A DLPKLVEGLKRL+KSDP V+    ESGEH+VAGAGELHLEICL DL++D   G  +  SDPVV +RETV  KS  T +SKSPNKHNRLYM A PLEE L  AI+ G+I PRDD KAR++IL+++FGWD   A+KIW FGP+T G N+ VD  K VQYLNEIKDSVV+
Sbjct:  437 LMMGGKVEPIDDMPAGNIVGLVGIDQFLLKSGTLTTSET--AHNMKVMKFSVSPVVQRSVQVKNAQDLPKLVEGLKRLSKSDPCVLTFSNESGEHVVAGAGELHLEICLNDLENDH-AGVPLTISDPVVQYRETVAGKSSMTALSKSPNKHNRLYMVAEPLEEDLCLAIEAGKITPRDDFKARARILADDFGWDVTDARKIWAFGPDTNGANLLVDQTKAVQYLNEIKDSVVS 666          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_SACCA (Elongation factor 2 OS=Saccharomyces castellii GN=EFT1 PE=3 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 1.685e-75
Identity = 137/233 (58.80%), Postives = 183/233 (78.54%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E ++D P GN + +VG+DQF+ K+ TLT ++   AH ++ MKFSVSPVV+VAV+ K A+DLPKLVEGLKRL+KSDP V+  + E+GEHIVAG GELHLEICL+DL++D   G  +  S PVV++RETV  +S +T +SKSPNKHNR+Y++A P+EE ++ AI+ G+I PRDD KAR++++++EFGWD   A+KIWCFGP+  GPN+ VD  K VQYLNEIKDSVVA
Sbjct:  436 LMMGRFVEPIDDCPAGNIIGLVGIDQFLLKSGTLTTDET--AHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLKRLSKSDPCVLTYMAETGEHIVAGTGELHLEICLQDLENDH-AGVPLKISPPVVAYRETVETESSQTALSKSPNKHNRIYLKAEPIEEEVSLAIESGKINPRDDLKARARVMADEFGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQYLNEIKDSVVA 665          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_PICPA (Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=3 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 2.200e-75
Identity = 139/233 (59.66%), Postives = 183/233 (78.54%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVVA 703
            + MG+  E ++DVP GN + +VG+DQF+ K+ TLT  +   AH ++ MKFSVSPVV+VAV+ K A+DLPKLVEGLKRL+KSDP V+  I ESGEHIVAG GELHLEICL+DLQDD   G  +  S PVV++RETV  +S  T +SKS NKHNR+Y++A+P++E L+ AI++G++ PRDD KAR++I+++E+GWD   A+KIWCFGP+ TG N+ VD  K VQYL+EIKDSVVA
Sbjct:  436 LMMGRTVEPIDDVPAGNILGIVGIDQFLLKSGTLTTNEA--AHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLKRLSKSDPCVLTYISESGEHIVAGTGELHLEICLQDLQDDH-AGVPLKISPPVVTYRETVTNESSMTALSKSQNKHNRIYLKAQPIDEELSLAIEEGKVHPRDDFKARARIMADEYGWDVTDARKIWCFGPDGTGANLVVDQSKAVQYLHEIKDSVVA 665          
The following BLAST results are available for this feature:
BLAST of CF831988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
EF2_BOVIN2.271e-8064.81Elongation factor 2 OS=Bos taurus GN=EEF2 PE=2 SV=... [more]
EF2_BOMMO6.609e-8064.81Translation elongation factor 2 OS=Bombyx mori GN=... [more]
EF2_CRYPV1.378e-7759.83Elongation factor 2 OS=Cryptosporidium parvum PE=3... [more]
EF2_SCHPO3.070e-7761.37Elongation factor 2 OS=Schizosaccharomyces pombe G... [more]
EF2_CAEEL3.070e-7761.80Elongation factor 2 OS=Caenorhabditis elegans GN=e... [more]
EF2_DROME8.932e-7762.66Elongation factor 2 OS=Drosophila melanogaster GN=... [more]
EF2_ENTHI1.167e-7658.62Elongation factor 2 OS=Entamoeba histolytica GN=EF... [more]
EF2_NEUCR1.290e-7561.80Elongation factor 2 OS=Neurospora crassa GN=cot-3 ... [more]
EF2_SACCA1.685e-7558.80Elongation factor 2 OS=Saccharomyces castellii GN=... [more]
EF2_PICPA2.200e-7559.66Elongation factor 2 OS=Pichia pastoris GN=EFT1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831988 ID=CF831988; Name=CF831988; organism=Citrus sinensis; type=EST; length=704bp
CCGTATTTGGATGGGAAAGAAGCAGGAAACCGTTGAGGATGTGCCTTGTG
GTAACACTGTGGCTATGGTTGGTCTCGATCAATTCATCACTAAAAATGCT
ACCTTGACTAATGAGAAGGAAGTTGATGCCCATCCCATCCGTGCTATGAA
GTTCTCTGTCTCACCTGTTGTTCGTGTGGCTGTCCAGTGCAAAGTCGCTT
CTGATCTCCCTAAGCTTGTTGAAGGTCTTAAGCGTTTGGCCAAGTCAGAT
CCTATGGTTGTCTGTACAATTGAGGAGTCTGGCGAGCACATTGTTGCTGG
TGCGGGAGAACTTCACCTTGAGATCTGTTTGAAGGATCTGCAGGACGATT
TCATGGGAGGTGCTGAAATTATTAAATCTGATCCTGTTGTGTCCTTCCGT
GAAACTGTCCTTGAGAAGTCTTGCCGCACTGTGATGAGTAAGTCTCCCAA
CAAGCATAATCGTCTCTACATGGAAGCCCGACCTCTGGAAGAAGGTCTTG
CTGAGGCCATAGATGATGGCCGCATTGGTCCAAGGGATGATCCCAAGGCT
CGATCTAAGATCTTGTCTGAGGAGTTCGGCTGGGACAAGGATCTTGCGAA
GAAGATTTGGTGTTTTGGTCCTGAGACCACTGGCCCTAACATGTTCGTTG
ATATGTGTAAGGGAGTTCAATACTTGAATGAAATTAAGGATTCTGTTGTT
GCTG
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