CF831988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_WOLSU (Elongation factor G OS=Wolinella succinogenes GN=fusA PE=3 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.658e-14 Identity = 63/192 (32.81%), Postives = 106/192 (55.21%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCR-TVMSKSPNKHNRLYMEARPLEEGLA-EAIDD--GRIGPRDDPKARSKILSE 571 K+E ++++ G A VGL + +T + TL +EKE + M+F PV+ +AV+ K +D K+ L +LA+ DP V + EE+G+ I++G GELHLEI + ++ +F AE+ P V+FRETV + K C+ S ++ ++++ P E G E ++D G + P++ A K + E Sbjct: 363 KREDIKEIYAGEICAFVGLKETLTGD-TLCSEKEPVI--LERMEFP-EPVISIAVEPKTKADQEKMGIALNKLAEEDPSFRVNSDEETGQTIISGMGELHLEIIVDRMKREFKVEAEV--GQPQVAFRETVRKAVNKECKYAKQSGGRGQYGHVFIKLEPQEAGKGYEFVNDISGGVIPKEYIPAVDKGIKE 548
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_LACF3 (Elongation factor G OS=Lactobacillus fermentum (strain IFO 3956 / LMG 18251) GN=fusA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 57/177 (32.20%), Postives = 94/177 (53.11%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIR--AMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVC-TIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRET----VLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIG 529 +Q + +V G+ A +GL KN T + HP++ +M F PV++V+V+ K +D K+ +GL++LA+ DP T E+GE ++AG GELHL+I ++ L+ +F AE+ P VS+RE V + S ++ +++E PLEEG +D +G Sbjct: 363 QQNEISEVFSGDIAAAIGL-----KNTTTGDSLTDPDHPLQLESMDFP-EPVIQVSVEPKSKADQDKMDKGLQKLAEEDPTFKAETNPETGETLIAGMGELHLDIIVERLRREF--NAEVTVGKPQVSYREAFTKQVSAQGKFVRQSGGKGQYGDVWIEFTPLEEGAGFEFEDAIVG 531
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_ACIB3 (Elongation factor G OS=Acinetobacter baumannii (strain AB307-0294) GN=fusA PE=3 SV=1) HSP 1 Score: 78.5666 bits (192), Expect = 3.694e-14 Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLE 490 +++ ++++ G+ A VGL +T TL +EK + + M+F PV+++AV+ K +D K+ L RLAK DP V T EESG+ I+AG GELHL+I + ++ +F G E P+V++RET+ +E+ + V + K +Y+ PL+ Sbjct: 370 ERQDIDEIRAGDIAACVGLKD-VTTGDTLCDEKNIIT--LERMEFP-DPVIQLAVEPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMGELHLDIIVDRMKREF--GVEANIGKPMVAYRETIKKTVEQEGKLVRQTGGKGKFGHVYVRLEPLD 525
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_HELHP (Elongation factor G OS=Helicobacter hepaticus GN=fusA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 55/164 (33.54%), Postives = 91/164 (55.49%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCR-TVMSKSPNKHNRLYMEARPLEEG 496 K+E ++++ G A VGL +T + TL +EK + M F PV+++AV+ K +D K+ L +LA+ DP V T EE+G+ ++ G GELHLEI + L+ +F AE+ +P V+FRET+ +E+ C+ S ++ +++ P E G Sbjct: 362 KREDIKEIYAGEICAFVGLKDTVTGD-TLCDEKVPVI--LERMDFP-EPVIQIAVEPKTKADQEKMSIALSKLAEEDPSFRVSTHEETGQTLIGGMGELHLEIIVDRLKREFKVEAEV--GEPQVAFRETIRTAVEQECKYAKQSGGRGQYGHVHIRLEPKEAG 519
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_ACIBY (Elongation factor G OS=Acinetobacter baumannii (strain AYE) GN=fusA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLE 490 +++ ++++ G+ A VGL +T TL +EK + + M+F PV+++AV+ K +D K+ L RLAK DP V T EESG+ I+AG GELHL+I + ++ +F G E P+V++RET+ +E+ + V + K +Y+ PL+ Sbjct: 370 ERQDIDEIRAGDIAACVGLKD-VTTGDTLCDEKNIIT--LERMEFP-DPVIQLAVEPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMGELHLDIIVDRMKREF--GVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLEPLD 525
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_ACIBT (Elongation factor G OS=Acinetobacter baumannii (strain ATCC 17978 / NCDC KC 755) GN=fusA PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLE 490 +++ ++++ G+ A VGL +T TL +EK + + M+F PV+++AV+ K +D K+ L RLAK DP V T EESG+ I+AG GELHL+I + ++ +F G E P+V++RET+ +E+ + V + K +Y+ PL+ Sbjct: 370 ERQDIDEIRAGDIAACVGLKD-VTTGDTLCDEKNIIT--LERMEFP-DPVIQLAVEPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMGELHLDIIVDRMKREF--GVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLEPLD 525
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_ACIBS (Elongation factor G OS=Acinetobacter baumannii (strain SDF) GN=fusA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLE 490 +++ ++++ G+ A VGL +T TL +EK + + M+F PV+++AV+ K +D K+ L RLAK DP V T EESG+ I+AG GELHL+I + ++ +F G E P+V++RET+ +E+ + V + K +Y+ PL+ Sbjct: 370 ERQDIDEIRAGDIAACVGLKD-VTTGDTLCDEKNIIT--LERMEFP-DPVIQLAVEPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMGELHLDIIVDRMKREF--GVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLEPLD 525
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_ACIBC (Elongation factor G OS=Acinetobacter baumannii (strain ACICU) GN=fusA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLE 490 +++ ++++ G+ A VGL +T TL +EK + + M+F PV+++AV+ K +D K+ L RLAK DP V T EESG+ I+AG GELHL+I + ++ +F G E P+V++RET+ +E+ + V + K +Y+ PL+ Sbjct: 370 ERQDIDEIRAGDIAACVGLKD-VTTGDTLCDEKNIIT--LERMEFP-DPVIQLAVEPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMGELHLDIIVDRMKREF--GVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLEPLD 525
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_ACIB5 (Elongation factor G OS=Acinetobacter baumannii (strain AB0057) GN=fusA PE=3 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.825e-14 Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLE 490 +++ ++++ G+ A VGL +T TL +EK + + M+F PV+++AV+ K +D K+ L RLAK DP V T EESG+ I+AG GELHL+I + ++ +F G E P+V++RET+ +E+ + V + K +Y+ PL+ Sbjct: 370 ERQDIDEIRAGDIAACVGLKD-VTTGDTLCDEKNIIT--LERMEFP-DPVIQLAVEPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIIAGMGELHLDIIVDRMKREF--GVEANIGKPMVAYRETIKKTVEQEGKFVRQTGGKGKFGHVYVRLEPLD 525
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_NITSB (Elongation factor G OS=Nitratiruptor sp. (strain SB155-2) GN=fusA PE=3 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.302e-14 Identity = 50/132 (37.88%), Postives = 79/132 (59.85%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSV-SPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV 409 K+E ++++P G A+VGL +T + TL +E +HP+ K PV+ VAV+ K +D K+ L +LA+ DP V T EE+G+ I++G GELHLEI + ++ +F AE+ P V++RET+ Sbjct: 362 KREEIKELPAGEIGAVVGLKYTLTGD-TLCDE----SHPVILEKMEFPEPVISVAVEPKTKADQEKMATALAKLAEEDPSFRVHTDEETGQTIISGMGELHLEIIVDRMKREFKVDAEV--GQPQVAYRETI 486 The following BLAST results are available for this feature:
BLAST of CF831988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 409
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831988 ID=CF831988; Name=CF831988; organism=Citrus sinensis; type=EST; length=704bpback to top |