CF831988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_ARCB4 (Elongation factor G OS=Arcobacter butzleri (strain RM4018) GN=fusA PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.833e-13 Identity = 58/163 (35.58%), Postives = 90/163 (55.21%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRET----VLEKSCRTVMSKSPNKHNRLYMEARPLEEG 496 +E ++++ G A+VGL IT + TL +EK D + M F PV+ VAV+ K +D K+ L +LA+ DP V T EESG+ I++G GELHLEI + ++ +F AE+ P V++RET V ++ S ++ +Y+E +PL G Sbjct: 369 REEIKELYAGEIGAVVGLKDTITGD-TLASEK--DPVILERMDFP-DPVISVAVEPKTKADQEKMGIALGKLAEEDPSFRVNTDEESGQTIISGMGELHLEILVDRMKREFKVEAEV--GAPQVAYRETIRNAVKQEYKYAKQSGGKGQYGHVYLEIKPLPSG 525
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG2_DESPS (Elongation factor G 2 OS=Desulfotalea psychrophila GN=fusA2 PE=3 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 1.833e-13 Identity = 56/164 (34.15%), Postives = 91/164 (55.49%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDP-MVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSP----NKHNRLYMEARPLEEG 496 K+E V+++ G+ A+VGL +F T TL EKE + +M+F PV+ VA++ +D KL E L ++A DP VV E++G+ I++G GELHLEI + L ++F A + P VS++E++ + + P N+ ++ +E PLE G Sbjct: 361 KREEVKEIVAGDIGAVVGL-KFTTTGDTLC-EKEAQII-LESMEFP-DPVIGVAIEPSSKADEKKLTESLAKIALEDPSFVVSQNEDTGQTIISGMGELHLEIIVYRLLNEFKVAARV--GTPQVSYKESIQRSHSAEGLFEQPTGSSNQFAKVVLEIEPLERG 518
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_GEOLS (Elongation factor G OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=fusA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.395e-13 Identity = 51/134 (38.06%), Postives = 81/134 (60.45%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEK 418 K+E +++V G+ A VGL ++ T TL NE + A + +++F PV+ +A++ K SD KL L++LA DP V T EE+G+ I++G GELHLEI + + +F A + K P V++RET+ +K Sbjct: 361 KREEIKEVYAGDIAAAVGL-KYTTTGDTLCNEDQ--AVILESIEFP-EPVISIAIEPKTKSDQEKLGLSLQKLASEDPSFRVKTDEETGQTIISGMGELHLEIIVDRMMREFKVEANVGK--PQVAYRETITKK 488
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_CAMLR (Elongation factor G OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) GN=fusA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.395e-13 Identity = 64/192 (33.33%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCR-TVMSKSPNKHNRLYMEARPLEEGLA-EAIDD--GRIGPRDDPKARSKILSE 571 K+E ++ + G A+VGL +T + TL +EK D + M F PV+ VAV+ K +D K+ L +LA+ DP V T EESG+ I++G GELHLEI + + +F AE+ P V++RET+ +E+ + S ++ +++ PLE G E ++D G + P++ A K + E Sbjct: 361 KREEIKTLYAGEIGAVVGLKDTLTGD-TLASEK--DKVILERMDFP-DPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVEAEV--GQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQE 546
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_ACIAD (Elongation factor G OS=Acinetobacter sp. (strain ADP1) GN=fusA PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.395e-13 Identity = 54/162 (33.33%), Postives = 91/162 (56.17%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLE 490 +++ ++++ G+ A VGL +T TL +EK + + M+F PV+ +AV+ K +D K+ L RLAK DP V T EESG+ I+AG GELHL+I + ++ +F G E P+V++RET+ +E+ + V + K +Y+ P++ Sbjct: 370 ERQDLDEIRAGDIAACVGLKD-VTTGDTLCDEKNIIT--LERMEFP-EPVISLAVEPKTKADQEKMSIALGRLAKEDPSFRVRTDEESGQTIIAGMGELHLDIIVDRMKREF--GVEANIGKPMVAYRETIKKSVEQEGKFVRQTGGKGKFGHVYVRLEPMD 525
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG1_BORA1 (Elongation factor G 1 OS=Bordetella avium (strain 197N) GN=fusA1 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 3.127e-13 Identity = 65/195 (33.33%), Postives = 102/195 (52.31%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAH-PIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSK------SPNKHNRLYMEARPLEEG----LAEAIDDGRIGPRDDPKARSKILSE 571 +E +++V G+ A+VGL +T TL ++DAH + M+F PV+ AV+ K +D K+ L RLA+ DP V + EESG+ I++G GELHLEI + ++ +F G E P V++RET+ K+C V K ++ + ++ PL G +AI G + PR+ A K + E Sbjct: 369 REEIKEVLAGDIAAVVGLKD-VTTGETLC---DIDAHVTLERMEFP-EPVISQAVEPKSKADQEKMGLALSRLAQEDPSFRVRSDEESGQTIISGMGELHLEILVDRMKREF--GVEANVGKPQVAYRETI-RKTCDEVEGKFVKQSGGRGQYGHVVLKVEPLAPGGGYEFVDAIKGG-VVPREYIPAVDKGIQE 554
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_CAMJR (Elongation factor G OS=Campylobacter jejuni (strain RM1221) GN=fusA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 64/192 (33.33%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCR-TVMSKSPNKHNRLYMEARPLEEGLA-EAIDD--GRIGPRDDPKARSKILSE 571 K+E ++ + G A+VGL +T + TL +EK D + M F PV+ VAV+ K +D K+ L +LA+ DP V T EESG+ I++G GELHLEI + + +F AE+ P V++RET+ +E+ + S ++ +++ PLE G E ++D G + P++ A K + E Sbjct: 361 KREEIKVLYAGEIGAVVGLKDTLTGD-TLASEK--DKVILERMDFP-DPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVEAEV--GQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQE 546
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_CAMJJ (Elongation factor G OS=Campylobacter jejuni subsp. jejuni serotype O:23/36 (strain 81-176) GN=fusA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 64/192 (33.33%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCR-TVMSKSPNKHNRLYMEARPLEEGLA-EAIDD--GRIGPRDDPKARSKILSE 571 K+E ++ + G A+VGL +T + TL +EK D + M F PV+ VAV+ K +D K+ L +LA+ DP V T EESG+ I++G GELHLEI + + +F AE+ P V++RET+ +E+ + S ++ +++ PLE G E ++D G + P++ A K + E Sbjct: 361 KREEIKVLYAGEIGAVVGLKDTLTGD-TLASEK--DKVILERMDFP-DPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVEAEV--GQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQE 546
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_CAMJE (Elongation factor G OS=Campylobacter jejuni GN=fusA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 64/192 (33.33%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCR-TVMSKSPNKHNRLYMEARPLEEGLA-EAIDD--GRIGPRDDPKARSKILSE 571 K+E ++ + G A+VGL +T + TL +EK D + M F PV+ VAV+ K +D K+ L +LA+ DP V T EESG+ I++G GELHLEI + + +F AE+ P V++RET+ +E+ + S ++ +++ PLE G E ++D G + P++ A K + E Sbjct: 361 KREEIKVLYAGEIGAVVGLKDTLTGD-TLASEK--DKVILERMDFP-DPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVEAEV--GQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQE 546
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_CAMJD (Elongation factor G OS=Campylobacter jejuni subsp. doylei (strain ATCC BAA-1458 / RM4099 / 269.97) GN=fusA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 64/192 (33.33%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCR-TVMSKSPNKHNRLYMEARPLEEGLA-EAIDD--GRIGPRDDPKARSKILSE 571 K+E ++ + G A+VGL +T + TL +EK D + M F PV+ VAV+ K +D K+ L +LA+ DP V T EESG+ I++G GELHLEI + + +F AE+ P V++RET+ +E+ + S ++ +++ PLE G E ++D G + P++ A K + E Sbjct: 361 KREEIKVLYAGEIGAVVGLKDTLTGD-TLASEK--DKVILERMDFP-DPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVEAEV--GQPQVAYRETIRKAVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQE 546 The following BLAST results are available for this feature:
BLAST of CF831988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 409
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831988 ID=CF831988; Name=CF831988; organism=Citrus sinensis; type=EST; length=704bpback to top |