CF831988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_CAMJ8 (Elongation factor G OS=Campylobacter jejuni subsp. jejuni serotype O:6 (strain 81116 / NCTC 11828) GN=fusA PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 64/192 (33.33%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCR-TVMSKSPNKHNRLYMEARPLEEGLA-EAIDD--GRIGPRDDPKARSKILSE 571 K+E ++ + G A+VGL +T + TL +EK D + M F PV+ VAV+ K +D K+ L +LA+ DP V T EESG+ I++G GELHLEI + + +F AE+ P V++RET+ +E+ + S ++ +++ PLE G E ++D G + P++ A K + E Sbjct: 361 KREEIKVLYAGEIGAVVGLKDTLTGD-TLASEK--DKVILERMDFP-DPVISVAVEPKTKADQEKMSIALNKLAQEDPSFRVSTDEESGQTIISGMGELHLEIIVDRMLREFKVEAEV--GQPQVAYRETIRKTVEQEYKYAKQSGGRGQYGHVFLRLEPLEPGSGYEFVNDIKGGVIPKEYIPAVDKGVQE 546
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG1_STRCO (Elongation factor G 1 OS=Streptomyces coelicolor GN=fusA PE=3 SV=2) HSP 1 Score: 75.0998 bits (183), Expect = 4.085e-13 Identity = 50/131 (38.17%), Postives = 80/131 (61.07%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV 409 K+E +E V G+ VA++GL Q T TL+++K + +M F +PV++VA++ K D KL ++RLA+ DP V T EE+G+ I+ G GELHLE+ + ++ +F A + K P V++RET+ Sbjct: 375 KREEIESVGAGDIVAVMGLKQ-TTTGETLSDDKSPVI--LESMDFP-APVIQVAIEPKSKGDQEKLGVAIQRLAEEDPSFQVHTNEETGQTIIGGMGELHLEVLVDRMRREFKVEANVGK--PQVAYRETI 499
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_STRRA (Elongation factor G (Fragment) OS=Streptomyces ramocissimus GN=fus PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13 Identity = 50/131 (38.17%), Postives = 80/131 (61.07%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV 409 K+E +E V G+ VA++GL Q T TL++EK + +M F +PV++VA++ K D KL ++RLA+ DP V + EE+G+ I+ G GELHLE+ + ++ +F A + K P V++RET+ Sbjct: 8 KREEIESVGAGDIVAVMGLKQ-TTTGETLSDEKSPVI--LESMDFP-APVIQVAIEPKSKGDQEKLGVAIQRLAEEDPSFQVHSDEETGQTIIGGMGELHLEVLVDRMRREFKVEANVGK--PQVAYRETI 132
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_HALHL (Elongation factor G OS=Halorhodospira halophila (strain DSM 244 / SL1) GN=fusA PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13 Identity = 55/175 (31.43%), Postives = 93/175 (53.14%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLEEGLAEAIDDGRIG 529 ++E +++V G+ A VGL T + +V + M+F PV+ VAV+ K SD K+ + L RLA+ DP V T EESG+ I++G GELHL+I + L+ +F A + P V++RET+ +E+ + V S ++ +++ +P E G + + +G Sbjct: 369 QREEIKEVRAGDIAAAVGLKDVTTGDTLCDPSNKVT---LERMEFP-EPVIAVAVEPKTRSDQEKMGQALGRLAQEDPSFRVRTDEESGQTIISGMGELHLDIIVDRLKREFKVEANV--GAPQVAYRETIRKQIEQEGKFVRQSGGRGQYGHVHIRMKPQERGEGYSFESKIVG 537
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG2_METCA (Elongation factor G 2 OS=Methylococcus capsulatus GN=fusA2 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.335e-13 Identity = 60/192 (31.25%), Postives = 103/192 (53.65%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLEEGLAEAIDDGRIG---PRDDPKARSKILSEE 574 +E V++V G+ A +GL +T TL + K+V + M+F PV+ VAV+ K +D K+ L +LA+ DP V T EESG+ I++G GELHLEI + ++ +F G + P V++RET+ +E+ + V + ++ +++ PL+ G +G +G P++ A K + E+ Sbjct: 369 REEVKEVRAGDIAAAIGLKD-VTTGDTLCDPKDVIT--LERMEFP-EPVISVAVEPKTKADQEKMGIALNKLAQEDPSFRVRTDEESGQTIISGMGELHLEIIVDRMKREF--GVDANVGAPQVAYRETIRKAVEQEGKYVRQTGGRGQYGHVWLRIEPLDPGGGYEFVNGIVGGVVPKEYIPAVDKGIQEQ 554
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_ERWT9 (Elongation factor G OS=Erwinia tasmaniensis (strain DSM 17950 / Et1/99) GN=fusA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 57/165 (34.55%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLE-----KSCRTVMSKSPNKHNRLYMEARPLEEG 496 K+E +++V G+ A +GL +T TL + V + M+F PV+ VAV+ K +D K+ L RLAK DP V T EESG+ I+AG GELHL+I + ++ +F A + K P V++RET+ E + S + + ++ PLE G Sbjct: 370 KREEIKEVRAGDIAAAIGLKD-VTTGDTLCDPSNVII--LERMEFP-EPVISVAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESGQTIIAGMGELHLDILVDRMKREFNVEANVGK--PQVAYRETIRETVKDVEGKHAKQSGGRGQFGHVVIDMGPLEAG 528
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_CHRVO (Elongation factor G OS=Chromobacterium violaceum GN=fusA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 51/130 (39.23%), Postives = 73/130 (56.15%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV 409 ++ +E+V G+ A +GL + +T TL VDA I PV+ VAV+ K +D K+ L RLAK DP V T EESG+ I++G GELHLEI + ++ +F G E P V++RET+ Sbjct: 368 RKEIEEVRAGDIAAAIGLKE-VTTGETLC---AVDAEIILERMEFPDPVIHVAVEPKTKADQEKMGVALNRLAKEDPSFRVRTDEESGQTIISGMGELHLEILVDRMKREF--GVEANVGAPQVAYRETI 491
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_ANATD (Elongation factor G OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=fusA PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 56/166 (33.73%), Postives = 92/166 (55.42%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPI--RAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTV-----MSKSPNKHNRLYMEARPLEEG 496 +E V+ V G+ A +GL T + TL +E HPI +M+F PV++VA++ K +D K+ L+RLA+ DP V T E+G+ ++AG GELHLEI + ++ +F E+ P V+++ET+ +KS + S ++ +++E PLE G Sbjct: 362 REDVDAVYAGDICAAIGLSNTTTGD-TLCDEN----HPIVLESMEFP-EPVIQVAIEPKTKADQEKMGIALQRLAEEDPTFKVSTNHETGQTLIAGMGELHLEIIVDRMRREFK--VEVNVGKPQVAYKETI-KKSVKVEGKYIRQSGGRGQYGHVWLELEPLERG 518
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG1_GEOMG (Elongation factor G 1 OS=Geobacter metallireducens (strain GS-15 / ATCC 53774 / DSM 7210) GN=fusA1 PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 6.967e-13 Identity = 65/192 (33.85%), Postives = 98/192 (51.04%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEK----SCRTVMSKSPNKHNRLYMEARPLEEGLA-EAID--DGRIGPRDDPKARSKILSE 571 K+E +++V G+ A VGL ++ T TL E DA I PV+ +A++ K +D KL L++LA DP V T EE+G+ I++G GELHLEI + L +F A + K P V++RETV +K S ++ +++E P E G E +D G + PR+ A K + E Sbjct: 362 KREEIKEVLAGDIAAAVGL-KYTTTGDTLCPE---DAPVILESIEFPEPVIAIAIEPKTKADQEKLGISLQKLASEDPSFRVRTDEETGQTIISGMGELHLEIIVDRLMREFKVEANVGK--PQVAYRETVTKKVKVEGKFVRQSGGRGQYGHVWIEMEPQEPGKGYEFVDAIKGGVVPREYIPAVDKGIQE 547
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_PSYWF (Elongation factor G OS=Psychrobacter sp. (strain PRwf-1) GN=fusA PE=3 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 9.099e-13 Identity = 55/161 (34.16%), Postives = 92/161 (57.14%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLE 490 Q+ ++++ G+ A+VG+ T + TL +EKE+ + M+F PV+ +AV+ K +D K+ L RLAK DP V T EESG+ I++G GELHLEI + ++ +F A I P V++RET+ +E+ + V + K ++++ PL+ Sbjct: 371 QQELDEIRAGDIAALVGMKDVGTGD-TLCDEKEIIT--LERMEFP-EPVISLAVEPKTKADQEKMSIALGRLAKEDPSFRVHTDEESGQTIISGMGELHLEILVDRMKREFKVEANI--GAPQVAYRETIRGTVEQEGKFVRQTGGRGKFGHVWLKLEPLD 525 The following BLAST results are available for this feature:
BLAST of CF831988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 409
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831988 ID=CF831988; Name=CF831988; organism=Citrus sinensis; type=EST; length=704bpback to top |