CF831988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_THEP1 (Elongation factor G OS=Thermotoga petrophila (strain RKU-1 / ATCC BAA-488 / DSM 13995) GN=fusA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 59/178 (33.15%), Postives = 89/178 (50.00%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSV-SPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLE------KSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIG 529 K+E V+ V G+ A VGL T + TL +EKE P+ K PV+ +A++ +D KLV+ L L++ DP + ++ E+GE I++G GELHLEI + L+ +F G + P V++RET+ K R + H L +E P EEG D +G Sbjct: 365 KREEVDYVRPGDIAAGVGLKVSQTGD-TLCDEKE----PVILEKIDFPEPVISLAIEPATKADEEKLVKALLALSEEDPTLQVRVDKETGETIISGMGELHLEIVVDRLKREF--GVNVRVGQPQVAYRETIKRPAEAEGKYIRQTGGRGQYGHVILRIEPIPEEEGKNFEFIDKTVG 535
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_RHIME (Elongation factor G OS=Rhizobium meliloti GN=fusA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 47/133 (35.34%), Postives = 73/133 (54.89%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEK 418 +E +E+ G+ VA+ GL + T + K V + M+F PV+++A++ K D K+ L RLA DP V T EESG+ I+AG GELHL+I + ++ +F A + P V++RET+ K Sbjct: 368 REDIEEAFAGDIVALAGLKETTTGDTLCDPLKPVI---LERMEFP-EPVIQIAIEPKTKGDQEKMGLALNRLAAEDPSFRVKTDEESGQTIIAGMGELHLDIIVDRMRREFKVEASV--GAPQVAYRETITRK 494
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_LEPIN (Elongation factor G OS=Leptospira interrogans GN=fusA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 49/168 (29.17%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEK-EVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKS----CRTVMSKSPNKHNRL--YMEARPLEEGL 499 + E ++ G+ +A+ G+D T T+ K +V + F +PV+ + ++ K + L L + L R K DP ++ ESG+ I+ G GELHLE+ ++ ++ ++ G E+I P V++RET+ K+ + + R+ YME PLEE L Sbjct: 369 EMEDIDSAEAGDIIALFGID--CASGDTFTDGKLKVSMESM----FVPAPVISLTIEAKESKHLNNLAKALNRFTKEDPTFQTHVDQESGQTIIKGMGELHLEVYIERMKREY--GVELITGAPQVAYRETITSKADFDYTHKKQTGGQGQFGRVAGYMEPIPLEETL 528
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_LEPIC (Elongation factor G OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni GN=fusA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 49/168 (29.17%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEK-EVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKS----CRTVMSKSPNKHNRL--YMEARPLEEGL 499 + E ++ G+ +A+ G+D T T+ K +V + F +PV+ + ++ K + L L + L R K DP ++ ESG+ I+ G GELHLE+ ++ ++ ++ G E+I P V++RET+ K+ + + R+ YME PLEE L Sbjct: 369 EMEDIDSAEAGDIIALFGID--CASGDTFTDGKLKVSMESM----FVPAPVISLTIEAKESKHLNNLAKALNRFTKEDPTFQTHVDQESGQTIIKGMGELHLEVYIERMKREY--GVELITGAPQVAYRETITSKADFDYTHKKQTGGQGQFGRVAGYMEPIPLEETL 528
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_LEPBL (Elongation factor G OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain L550) GN=fusA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 49/168 (29.17%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEK-EVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKS----CRTVMSKSPNKHNRL--YMEARPLEEGL 499 + E ++ G+ +A+ G+D T T+ K +V + F +PV+ + ++ K + L L + L R K DP ++ ESG+ I+ G GELHLE+ ++ ++ ++ G E+I P V++RET+ K+ + + R+ YME PLEE L Sbjct: 369 EMEDIDSAEAGDIIALFGID--CASGDTFTDGKLKVSMESM----FVPAPVISLTIEAKESKHLNNLAKALNRFTKEDPTFQTHVDPESGQTIIKGMGELHLEVYIERMKREY--GVELITGAPQVAYRETITSKADFDYTHKKQTGGQGQFGRVAGYMEPIPLEETL 528
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_LEPBJ (Elongation factor G OS=Leptospira borgpetersenii serovar Hardjo-bovis (strain JB197) GN=fusA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 49/168 (29.17%), Postives = 85/168 (50.60%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEK-EVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKS----CRTVMSKSPNKHNRL--YMEARPLEEGL 499 + E ++ G+ +A+ G+D T T+ K +V + F +PV+ + ++ K + L L + L R K DP ++ ESG+ I+ G GELHLE+ ++ ++ ++ G E+I P V++RET+ K+ + + R+ YME PLEE L Sbjct: 369 EMEDIDSAEAGDIIALFGID--CASGDTFTDGKLKVSMESM----FVPAPVISLTIEAKESKHLNNLAKALNRFTKEDPTFQTHVDPESGQTIIKGMGELHLEVYIERMKREY--GVELITGAPQVAYRETITSKADFDYTHKKQTGGQGQFGRVAGYMEPIPLEETL 528
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_LEGPL (Elongation factor G OS=Legionella pneumophila (strain Lens) GN=fusA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 55/163 (33.74%), Postives = 91/163 (55.83%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLEEG 496 +E +++V G+ A VGL + +T TL ++ +V + M F PV+ VAV+ K +D K+ L +LA+ DP V T EESG+ I+ G GELHLEI + ++ +F A + K P V++RET+ +E+ + V S ++ ++++ P E G Sbjct: 367 REEIKEVRAGDIAAAVGL-KTVTTGDTLCDQDKVVI--LERMDFP-DPVIAVAVEPKTKADQEKMGIALGKLAQEDPSFRVHTDEESGQTIIQGMGELHLEIIVDRMKREFNVEANVGK--PQVAYRETLKQAIEQEGKFVRQSGGRGQYGHVWLKIEPQEPG 523
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_LARHH (Elongation factor G OS=Laribacter hongkongensis (strain HLHK9) GN=fusA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 49/130 (37.69%), Postives = 72/130 (55.38%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV 409 ++ +++V G+ A +GL +T TL VDA I PV+ VAV+ K +D K+ L RLA+ DP V T EESG+ I++G GELHLEI + ++ +F G E P V++RET+ Sbjct: 368 RKEIDEVRAGDIAAAIGLKD-VTTGETLC---AVDAPIILERMEFPEPVIHVAVEPKTKADQEKMGIALGRLAREDPSFRVRTDEESGQTIISGMGELHLEIIVDRMKREF--GVEANVGAPQVAYRETI 491
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_EDWI9 (Elongation factor G OS=Edwardsiella ictaluri (strain 93-146) GN=fusA PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 53/165 (32.12%), Postives = 87/165 (52.73%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLE-----KSCRTVMSKSPNKHNRLYMEARPLEEG 496 K+E +++V G+ A +GL +T TL ++ + M+F PV+ +AV+ K +D K+ L RLAK DP V T EES + I++G GELHLEI + ++ +F A + K P V++RET+ + + S ++ + ++ PLE G Sbjct: 370 KREEIKEVRAGDIAAAIGLKD-VTTGDTLCDQNAPII--LERMEFP-EPVISIAVEPKTKADQEKMGLALGRLAKEDPSFRVRTDEESNQTIISGMGELHLEIIVDRMKREFNVEANVGK--PQVAYRETIRDTVKDVEGKHAKQSGGRGQYGHVVIDMFPLEPG 528
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_CHLTE (Elongation factor G OS=Chlorobium tepidum GN=fusA-1 PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.241e-11 Identity = 59/181 (32.60%), Postives = 92/181 (50.83%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLEEGLA-EAIDD--GRIGPRD 538 K+E + V G+ A VGL T + K + + M F PV+ +AV+ K +D KL L +LA+ DP V T EE+G+ ++AG GELHLEI + L+ +F A + P V++RET+ +E + V S + + + PLEEG E +D+ G + P++ Sbjct: 370 KREERDAVYAGDIAAAVGLKDVRTGDTLCDESKPI---VLEKMVFP-EPVIEIAVEPKTKADNDKLGMSLAKLAEEDPTFRVKTDEETGQTLIAGMGELHLEILVDRLKREFKVEANV--GQPQVAYRETIRGTVEYEGKFVRQSGGKGQFGLVVLRVEPLEEGKGYEFVDEIKGGVIPKE 544 The following BLAST results are available for this feature:
BLAST of CF831988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 409
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831988 ID=CF831988; Name=CF831988; organism=Citrus sinensis; type=EST; length=704bpback to top |