CF831988

Overview
NameCF831988
Unique NameCF831988
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length704
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1001 contig Csv1_Contig1001:1..704. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_METTP (Elongation factor 2 OS=Methanosaeta thermophila (strain DSM 6194 / PT) GN=fusA PE=3 SV=1)

HSP 1 Score: 158.688 bits (400), Expect = 2.809e-38
Identity = 100/233 (42.92%), Postives = 136/233 (58.37%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700
            I MG ++  VE +P GN  A+ GL   I  +   T   + +  P   +K    PV+ VAV+ K   DLPKL+E L++ AK DP +  TI EE+GEH++AG GELHLEI    +Q D   G EI  S P+V +RE+V  KS   V  KSPN HNR Y+E  PLE G+ E + DG+I  + +   R KIL E  G DK+ A+ +  F     G NMF++M KG+QYL E  + ++
Sbjct:  340 IMMGAERIEVERIPAGNIAAVTGLRDAIVGS---TVSSDPNMTPFEIIKHVSEPVMTVAVEAKNMRDLPKLIEVLRQTAKEDPTLQITINEETGEHLMAGMGELHLEIVATRIQRD--KGVEIKTSPPIVVYRESVTGKS-GPVEGKSPNHHNRFYIEIEPLEPGVIEVLKDGKIDMKMEEVERRKILIEA-GMDKEEARNMVNF----VGTNMFLNMTKGIQYLRETMELIL 561          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_PYRWO (Elongation factor 2 OS=Pyrococcus woesei GN=fusA PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.791e-38
Identity = 95/235 (40.43%), Postives = 142/235 (60.43%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700
            I+MG ++  +E VP GN VA+ GL   +        + E    P  A+ +   PVV VA++ K   DLP+L+E L++LAK DP +   I EE+G+H+++G GELHLE+ L  LQ D+  G E+  S+P+V +RE++ + S   V  KSPNKHNR Y+   P+ + + +AI +G I  G   DPKA +K L+ E G D D+A+ +     +    NMF+D  KG+QYLNE+ D ++
Sbjct:  340 IYMGPERINMEAVPAGNIVAVTGLRDAMAGETVAEEQIE----PFEALHYVSEPVVTVAIEAKNVKDLPRLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLYKLQKDW--GIEVDVSEPIVVYRESITKPS-PIVEGKSPNKHNRFYVVVEPMPDEIYQAIKEGIIPEGRVKDPKAVAKKLA-ELGMDYDIARGV----VDIYNGNMFLDNTKGIQYLNEVMDLLI 562          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_PYRFU (Elongation factor 2 OS=Pyrococcus furiosus GN=fusA PE=3 SV=1)

HSP 1 Score: 157.918 bits (398), Expect = 4.791e-38
Identity = 95/235 (40.43%), Postives = 142/235 (60.43%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700
            I+MG ++  +E VP GN VA+ GL   +        + E    P  A+ +   PVV VA++ K   DLP+L+E L++LAK DP +   I EE+G+H+++G GELHLE+ L  LQ D+  G E+  S+P+V +RE++ + S   V  KSPNKHNR Y+   P+ + + +AI +G I  G   DPKA +K L+ E G D D+A+ +     +    NMF+D  KG+QYLNE+ D ++
Sbjct:  340 IYMGPERINMEAVPAGNIVAVTGLRDAMAGETVAEEQIE----PFEALHYVSEPVVTVAIEAKNVKDLPRLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLYKLQKDW--GIEVDVSEPIVVYRESITKPS-PIVEGKSPNKHNRFYVVVEPMPDEIYQAIKEGIIPEGRVKDPKAVAKKLA-ELGMDYDIARGV----VDIYNGNMFLDNTKGIQYLNEVMDLLI 562          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_PYRKO (Elongation factor 2 OS=Pyrococcus kodakaraensis GN=fusA PE=3 SV=1)

HSP 1 Score: 157.147 bits (396), Expect = 8.173e-38
Identity = 97/235 (41.28%), Postives = 142/235 (60.43%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700
            I+MG ++  +E VP GN VA+ GL   +        + E    P  A+ ++  PVV VA++ K   DLPKLVE L++LAK DP +   I EE+G+H+++G GELHLE+ L  L+ ++    E+  S P+V +RE+V ++S   V  KSPNKHNR Y+   P+ + + +AI +G I  G   DPKA +K L+ E G D ++AK I     +    NMF+D  KG+QYLNE+ D +V
Sbjct:  340 IYMGPERINMEAVPAGNIVAVTGLRDAMAGETVSVQQIE----PFEALHYTSEPVVTVAIEAKNVKDLPKLVEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLHRLKTEWKLDVEV--SPPIVVYRESVTKQS-PIVEGKSPNKHNRFYITVEPMPDEIYQAIREGEIPEGRPKDPKAVAKKLA-ELGMDYEIAKGI----VDIYNGNMFLDNTKGIQYLNEVMDLLV 562          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_METB6 (Elongation factor 2 OS=Methanoregula boonei (strain 6A8) GN=fusA PE=3 SV=1)

HSP 1 Score: 154.836 bits (390), Expect = 4.056e-37
Identity = 96/233 (41.20%), Postives = 133/233 (57.08%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700
            I+MG K+  VE++  GN  A+ GL   I   +T+T+  E+   P  ++K    PV+ VAV+ K   DLPKLVE L+++AK DP +   I EE+GEH+++G GELHLEI    ++ D   G EI+ S+P+V +RETV  K    V  KSPN+HNR Y    PL E +   I  G I        R  +L +  G DKD AK +        G NM +DM KG+QYLNE  + ++
Sbjct:  341 IFMGPKRVEVEEIVAGNIAAVTGLKDAIV-GSTVTSLMEMS--PFESLKHYSEPVMTVAVEAKNMKDLPKLVEVLRQVAKEDPTLGIAINEETGEHLISGMGELHLEIVTGRIKRD--KGVEIVTSEPIVVYRETVTGK-VEDVEGKSPNRHNRFYFTLEPLPEEIVNLIKAGEITMNQQAIERRDVLLKA-GMDKDEAKNV----KHIKGTNMLIDMTKGIQYLNETMELII 562          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_THEON (Elongation factor 2 OS=Thermococcus onnurineus (strain NA1) GN=fusA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.036e-37
Identity = 95/235 (40.43%), Postives = 141/235 (60.00%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700
            I+MG ++  +E V  GN VA+ GL   +        + E    P  A+ ++  PVV VA++ K   DLPKL+E L++LAK DP +   I EE+G+H+++G GELHLE+ L  L+ ++    ++  S P+V +RE+V ++S   V  KSPNKHNR Y+   PL + + EAI +G I  G   DPKA +K L+ E G D ++AK I     +    N+F+D  KG+QYLNE+ D +V
Sbjct:  340 IYMGPERVNMEAVQAGNIVAVTGLRDAMAGETVSVEQIE----PFEALHYTSEPVVTVAIEAKNVKDLPKLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLYRLKTEWKLDVDV--SPPIVVYRESVTKQS-PIVEGKSPNKHNRFYITVEPLPDAIYEAIREGEIPEGRPKDPKAVAKKLA-ELGLDYEIAKGI----VDVYNGNIFLDNTKGIQYLNEVMDLLV 562          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_THEGJ (Elongation factor 2 OS=Thermococcus gammatolerans (strain DSM 15229 / JCM 11827 / EJ3) GN=fusA PE=3 SV=1)

HSP 1 Score: 153.68 bits (387), Expect = 9.036e-37
Identity = 98/235 (41.70%), Postives = 143/235 (60.85%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI--GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700
            I+MG ++  +E VP GN VA+ GL   +    T++ EK     P  A+ ++  PVV VA++ K   DLPKL+E L++LAK DP +   I EE+G+H+++G GELHLE+ L  L+ ++    ++  S P+V +RE+V +KS   V  KSPNKHNR Y+   P+ + + EAI +G I  G   +PK  +K L+ E G D +LAK I     +    NMF D  KG+QYLNE+ D +V
Sbjct:  340 IYMGPERINMEAVPAGNIVAVTGLRDAMA-GETVSVEK---IEPFEALHYTSEPVVTVAIEAKNVKDLPKLIEALRQLAKEDPTLHVKIDEETGQHLLSGMGELHLEVKLYRLKTEWKLDVDV--SPPIVVYRESVTKKS-PIVEGKSPNKHNRFYITVEPMPDEIYEAIREGIIPEGRPKNPKEVAKKLA-ELGMDYELAKGI----VDVYNGNMFFDNTKGIQYLNEVMDLLV 562          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_METMJ (Elongation factor 2 OS=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) GN=fusA PE=3 SV=1)

HSP 1 Score: 153.295 bits (386), Expect = 1.180e-36
Identity = 98/233 (42.06%), Postives = 137/233 (58.80%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700
            I+MG ++  VE +P GN  A+ GL   I   +T+T+  E+   P  ++K    PV+ VAV+ K   DLPKLVE L+++AK DP V  +I EE+GEH+++G GELHLEI    ++ D   G +I+ S P+V +RET+   S   V  KSPN+HNR Y+E  P++  + + I DG I        R   L    G DKD AK +     E T  NMF+DM KG+QYLNE  + V+
Sbjct:  341 IFMGAERIEVEALPAGNIAAVTGLKDAIV-GSTVTSLIEMT--PFESLKHYSEPVMTVAVEAKSMKDLPKLVEVLRQIAKEDPTVQVSINEETGEHLISGMGELHLEIITGRIKRD--KGVDILTSPPIVVYRETI-TGSVGPVEGKSPNRHNRFYIELEPMDPAIVKMILDGEISMNQQAIERRDALVAA-GMDKDEAKNVKAI--EAT--NMFIDMTKGIQYLNETMELVL 562          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_PYRIL (Elongation factor 2 OS=Pyrobaculum islandicum (strain DSM 4184 / JCM 9189) GN=fusA PE=3 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 2.013e-36
Identity = 94/233 (40.34%), Postives = 131/233 (56.22%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIE-ESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700
            I+MG  +  V  +P GN VA++G+D+      TL + +  D  P   M++   PVV VA++ K  ++L KLVE LK L   DP +   I+ E+G+ +++G G LHLEI    L++      E   S P++ FRETV E+S +    KSPNKHNRLY    PL+E   E I    I    DP+ R+KIL E+ GWD D A+ IW         N+ VD   G+QYL EI+D +V
Sbjct:  344 IYMGPSRIIVPYMPAGNIVALMGVDE-ARAGDTLVDPRISDIPPFEKMRYIAEPVVTVAIEPKNPAELAKLVEALKDLVIEDPTLDLKIDQETGQILLSGVGTLHLEIATWLLKE--RSKTEFTVSPPLIRFRETVRERS-QVWEGKSPNKHNRLYFYVEPLDETTIELIATKEITEDQDPRERAKILREKAGWDTDEARGIWAIDDRYF--NVIVDKTSGIQYLREIRDYIV 570          
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_METKA (Elongation factor 2 OS=Methanopyrus kandleri GN=fusA PE=3 SV=1)

HSP 1 Score: 151.754 bits (382), Expect = 3.434e-36
Identity = 88/233 (37.77%), Postives = 133/233 (57.08%), Query Frame = 2
Query:    5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700
            I+MG  +   ++VP GN  A+ GL   +    T+T+ ++    P   ++    PVV VAV+ K   DLPKL+E L ++AK DP V   I EE+G+H+V+G GELHLEI    +++    G +I  S+P+V +RE V       V  KSPNKHN+ Y+   P+EE + EAI++G+  P +  K   +    E+G D+D AK +        G N F+D   G+QYLNE+ + ++
Sbjct:  862 IYMGPDRIRTDEVPAGNIAAVTGLRD-VWAGETVTDPED-PIEPFEELQHFAEPVVTVAVEAKNTQDLPKLIEILHQIAKEDPTVKVEINEETGQHLVSGMGELHLEIIAHRIKER---GVDIKVSEPIVVYREGVFGVCDDEVEGKSPNKHNKFYVTVEPVEEEIVEAIEEGKFNPEEMSKKELEETLMEYGMDRDDAKAV----ETVKGTNFFLDKTVGLQYLNEVMELLI 1085          
The following BLAST results are available for this feature:
BLAST of CF831988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 409
Match NameE-valueIdentityDescription
EF2_METTP2.809e-3842.92Elongation factor 2 OS=Methanosaeta thermophila (s... [more]
EF2_PYRWO4.791e-3840.43Elongation factor 2 OS=Pyrococcus woesei GN=fusA P... [more]
EF2_PYRFU4.791e-3840.43Elongation factor 2 OS=Pyrococcus furiosus GN=fusA... [more]
EF2_PYRKO8.173e-3841.28Elongation factor 2 OS=Pyrococcus kodakaraensis GN... [more]
EF2_METB64.056e-3741.20Elongation factor 2 OS=Methanoregula boonei (strai... [more]
EF2_THEON9.036e-3740.43Elongation factor 2 OS=Thermococcus onnurineus (st... [more]
EF2_THEGJ9.036e-3741.70Elongation factor 2 OS=Thermococcus gammatolerans ... [more]
EF2_METMJ1.180e-3642.06Elongation factor 2 OS=Methanoculleus marisnigri (... [more]
EF2_PYRIL2.013e-3640.34Elongation factor 2 OS=Pyrobaculum islandicum (str... [more]
EF2_METKA3.434e-3637.77Elongation factor 2 OS=Methanopyrus kandleri GN=fu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C02_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831988 ID=CF831988; Name=CF831988; organism=Citrus sinensis; type=EST; length=704bp
CCGTATTTGGATGGGAAAGAAGCAGGAAACCGTTGAGGATGTGCCTTGTG
GTAACACTGTGGCTATGGTTGGTCTCGATCAATTCATCACTAAAAATGCT
ACCTTGACTAATGAGAAGGAAGTTGATGCCCATCCCATCCGTGCTATGAA
GTTCTCTGTCTCACCTGTTGTTCGTGTGGCTGTCCAGTGCAAAGTCGCTT
CTGATCTCCCTAAGCTTGTTGAAGGTCTTAAGCGTTTGGCCAAGTCAGAT
CCTATGGTTGTCTGTACAATTGAGGAGTCTGGCGAGCACATTGTTGCTGG
TGCGGGAGAACTTCACCTTGAGATCTGTTTGAAGGATCTGCAGGACGATT
TCATGGGAGGTGCTGAAATTATTAAATCTGATCCTGTTGTGTCCTTCCGT
GAAACTGTCCTTGAGAAGTCTTGCCGCACTGTGATGAGTAAGTCTCCCAA
CAAGCATAATCGTCTCTACATGGAAGCCCGACCTCTGGAAGAAGGTCTTG
CTGAGGCCATAGATGATGGCCGCATTGGTCCAAGGGATGATCCCAAGGCT
CGATCTAAGATCTTGTCTGAGGAGTTCGGCTGGGACAAGGATCTTGCGAA
GAAGATTTGGTGTTTTGGTCCTGAGACCACTGGCCCTAACATGTTCGTTG
ATATGTGTAAGGGAGTTCAATACTTGAATGAAATTAAGGATTCTGTTGTT
GCTG
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