CF831988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_ROSDO (Elongation factor G OS=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 52/174 (29.89%), Postives = 86/174 (49.43%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEAR----PLEEGLAEAIDDGRIG 529 +E +++ G+ +A+ GL T + V + M F PV+ +AV+ K +D K+ +GL RLA DP V T ESG+ I+ G GELHL+I + L+ +F A I P V++RET+ +++ T K + + + E + P E G + + +G Sbjct: 377 REEIDEAFAGDIIALAGLKDTTTGDTLCAQNDPV---VLETMTFP-DPVIEIAVEPKTKNDQEKMSQGLARLAAEDPSFRVETDLESGQTIMKGMGELHLDILVDRLKREFKVEANI--GAPQVAYRETISKEAEVTYTHKKQSGGSGQFAEVKMILTPTEPGEGYSFESRIVG 544
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_PROM4 (Elongation factor G OS=Prochlorococcus marinus (strain MIT 9211) GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 45/134 (33.58%), Postives = 71/134 (52.99%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKS 421 +E V+ + G+ A++GL T + T ++ + + F PV+ VAV+ K D+ KL + L LA+ DP V T +E+ + ++AG GELHLEI + + +F A I P VS+RET+ S Sbjct: 360 REEVDQLRAGDLGAVLGLKNTTTGDTLCTTDEPIVLETL----FIPEPVISVAVEPKTKGDMEKLSKALVSLAEEDPTFRVSTDQETNQTVIAGMGELHLEILVDRMLREFKVEANI--GAPQVSYRETIRSSS 487
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_DESHD (Elongation factor G OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 53/163 (32.52%), Postives = 87/163 (53.37%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLEEG 496 +E + +V G+ A VGL T + TL ++K + +M+F PV+ VA++ K D K+ L RLA+ DP + T ++SG+ I+ G GELHLEI + LQ +F E P V+++ET+ ++ + V S ++ ++E PLE+G Sbjct: 362 REEIPEVYAGDIAAAVGLKDTTTGD-TLCDDKAPII--LESMQFP-DPVINVAIEPKTKQDQEKMGTALARLAEEDPTFKMHTDQDSGQTIIEGMGELHLEIIVDRLQREFK--VECNVGRPQVAYKETIRRAVKSEGKFVRQSGGRGQYGHCWIEIEPLEQG 518
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_DECAR (Elongation factor G OS=Dechloromonas aromatica (strain RCB) GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 58/181 (32.04%), Postives = 94/181 (51.93%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLEEGLA-EAID--DGRIGPRD 538 ++E +++V G+ A VGL + T + K + + M F PV+ VAV+ K +D K+ L RLA+ DP V T EESG+ I++G GELHLEI + ++ +F A + P V++RE + +E+ + V S + ++++ P E G E ID G + PR+ Sbjct: 368 QREEIKEVRAGDIAAAVGLKEATTGDTLCDPAKVIT---LERMVFP-EPVIHVAVEPKTKADQEKMGLALGRLAQEDPSFRVRTDEESGQTIISGMGELHLEILVDRMRREFNVDASV--GAPQVAYRECIKKSVEQEGKFVKQSGGRGQFGHVWLKIEPNEAGKGYEFIDAIKGGVVPRE 542
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG_AGRT5 (Elongation factor G OS=Agrobacterium tumefaciens (strain C58 / ATCC 33970) GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 46/130 (35.38%), Postives = 71/130 (54.62%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV 409 +E +E+ G+ VA+ GL + T + K V + M+F PV+++A++ K D K+ L RLA DP V T EESG+ I+AG GELHL+I + ++ +F E P V++RET+ Sbjct: 368 REDIEEAFAGDIVALAGLKETTTGDTLCDPLKPVI---LERMEFP-EPVIQIAIEPKTKGDQEKMGLALNRLAAEDPSFRVKTDEESGQTIIAGMGELHLDILVDRMRREFK--VEATVGAPQVAYRETI 491
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG2_RALEJ (Elongation factor G 2 OS=Ralstonia eutropha (strain JMP134) GN=fusA2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 46/130 (35.38%), Postives = 71/130 (54.62%), Query Frame = 2 Query: 23 QETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV 409 ++ +++V G+ A VGL + T + K + + M F PV+ AV+ K +D K+ L RLA+ DP V T EESG+ I++G GELHLEI + ++ +F G E P V++RET+ Sbjct: 369 RQEIKEVRAGDIAAAVGLKEATTGDTLCDPGKVII---LERMSFP-EPVISQAVEPKTKADQEKMGIALNRLAQEDPSFRVTTDEESGQTIISGMGELHLEILVDRMRREF--GVEASVGKPQVAYRETI 492
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG2_MYXXD (Elongation factor G 2 OS=Myxococcus xanthus (strain DK 1622) GN=fusA2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 49/131 (37.40%), Postives = 77/131 (58.78%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV 409 K++ + + G+ A+VGL T + TL ++K+ + M F PV+ +A++ K +D K+++ L+RLA DP V T EE+G+ ++AG GELHLEI + L +F A I K P V++RETV Sbjct: 367 KKDEITECYAGDICAVVGLKLAGTGD-TLCDDKQPII--LERMDFP-EPVIDIAIEPKSTADQDKILQSLQRLAMEDPSFRVRTNEETGQTLIAGMGELHLEIIVDRLLREFKVDANIGK--PQVAYRETV 491
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG2_BORA1 (Elongation factor G 2 OS=Bordetella avium (strain 197N) GN=fusA2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 49/134 (36.57%), Postives = 74/134 (55.22%), Query Frame = 2 Query: 20 KQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEK 418 +++ + +V G+ A VGL +T TLT+ V + M F PV+ AV+ K +D K+ L RLA+ DP V T EESG+ I++G GELHLEI + ++ +F E P V++RET+ +K Sbjct: 368 ERKEINEVYAGDIAAAVGLKD-VTTGDTLTDPGHVII--LERMIFP-EPVISQAVEPKTKADQEKMSLALNRLAQEDPSFRVRTDEESGQTIISGMGELHLEILVDRMKREF--NVEATVGKPQVAYRETIRKK 495
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EFG1_SHEON (Elongation factor G 1 OS=Shewanella oneidensis GN=fusA PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.517e-11 Identity = 55/189 (29.10%), Postives = 97/189 (51.32%), Query Frame = 2 Query: 32 VEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMV-VCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETV---LEKSCRTV-MSKSPNKHNRLYMEARPLEEGLAEAIDDGRIG---PRDDPKARSKILSEE 574 +++V G+ A +GL + T + N+ +V + M+F PV+ +AV+ K +D K+ L++LA DP V T EES + +++G GELHL+I + ++ +F G E P V++RET+ +E + V S + ++++ P EEG + +G PR+ A K + E+ Sbjct: 372 LKEVRAGDIAAAIGLKEVTTGDTLCDNDHKVI---LERMEFP-EPVITIAVEPKSKADQDKMGIALQKLAAEDPSFRVETDEESSQTLISGMGELHLDIIVDRMRREF--GVECNVGKPQVAYRETIRGSVEAEGKFVRQSGGRGQFGHVWLKLEPNEEGAGYEFINAIVGGVVPREFIPAVDKGIQEQ 554 The following BLAST results are available for this feature:
BLAST of CF831988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 409
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831988 ID=CF831988; Name=CF831988; organism=Citrus sinensis; type=EST; length=704bpback to top |