CF831988
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_THEAC (Elongation factor 2 OS=Thermoplasma acidophilum GN=fusA PE=3 SV=2) HSP 1 Score: 140.198 bits (352), Expect = 1.034e-32 Identity = 87/234 (37.18%), Postives = 135/234 (57.69%), Query Frame = 2 Query: 11 MGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRI---GPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700 +G + V+++ GN A+VGL I + E V P M PVV +A++ K +DLP+L+E L+ ++K+DP + I +E+GEH+++G GELHL++ L +++D+ E+ SDP+V +RETV EK KSPNKHNR Y E PL+ + +AI+DG I D KA ++L + G D+D AK + C G NM D+ +G+QYL+E + ++ Sbjct: 341 VGPDRIPVDEITAGNIAAIVGLKGAIAGATVSSLENMV---PFEPMIHYSEPVVTLAIEAKHTADLPRLIEVLRDISKADPSIQVDINQETGEHLISGMGELHLDVTLYRIKNDYK--VEVETSDPIVVYRETV-EKKGGPFEGKSPNKHNRFYFEVEPLKPEVIQAIEDGDIPQGSKFKDKKALVELLVSK-GIDRDEAKGLVC----VEGTNMMFDVTRGIQYLDETMELLI 563
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_NATPD (Elongation factor 2 OS=Natronomonas pharaonis (strain DSM 2160 / ATCC 35678) GN=fusA PE=3 SV=1) HSP 1 Score: 139.813 bits (351), Expect = 1.350e-32 Identity = 86/234 (36.75%), Postives = 132/234 (56.41%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETT-GPNMFVDMCKGVQYLNEIKDSVV 700 I+MG ++E VE VP GN A+ GL I + V+ P +++ PV+ +V+ K DLPKL+E L+++AK DP + I E++GEH+++G GELHLE+ + ++ + G + +P+V FRE ++S R V +SPN HNR Y+ PLE+ + E I G + D P+ + E G DKD A+ + ET N+F+D KG+Q+LNE + VV Sbjct: 342 IYMGGEREEVERVPAGNIAAVTGLKDAIAGSTV----SSVEMTPFESIEHISEPVITKSVEAKNMDDLPKLIETLQQVAKEDPTIQIEINEDTGEHLISGQGELHLEVITQRIERN--QGIPVNTGEPIVVFREAPQQES-REVEGRSPNNHNRFYITVEPLEDDIVETIKMGDVS-MDMPELERREELMEQGMDKDTAQNV-----ETIHNTNVFIDDTKGIQHLNETMELVV 562
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_SULAC (Elongation factor 2 OS=Sulfolobus acidocaldarius GN=fusA PE=1 SV=3) HSP 1 Score: 135.191 bits (339), Expect = 3.326e-31 Identity = 81/240 (33.75%), Postives = 135/240 (56.25%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAH-------PIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700 ++MG +E E++P GN A +G+D A + E VD + + PVV ++V+ + DL K+++ L++L+ D +V I EE+GE++++G G LHLE+ L+ L++++ G +++ + P+V +RE++ KS + KSPNKHN+LY+ PL + I +G I D K +KIL ++ WD D AKKI N+F+D GVQ+L EI D+++ Sbjct: 342 LYMGAIRELAEEIPVGNIAAALGMD------AARSGETGVDIRFKDSVLGSFEKLHYISEPVVTISVEPRNPKDLTKMIDALRKLSIEDSNLVVKINEETGEYLLSGMGFLHLEVSLQLLKENY--GLDVVTTPPIVVYRESIRNKS-QVFEGKSPNKHNKLYISVEPLNNQTIDLIANGTIKEDMDNKEMAKILRDQAEWDYDEAKKIVAIDENI---NVFIDATSGVQHLREIMDTLL 569
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_THEVO (Elongation factor 2 OS=Thermoplasma volcanium GN=fusA PE=3 SV=1) HSP 1 Score: 134.035 bits (336), Expect = 7.409e-31 Identity = 81/233 (34.76%), Postives = 133/233 (57.08%), Query Frame = 2 Query: 11 MGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSE--EFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700 +G + VE+V GN A+VGL I + + E + P M PVV +A++ K +DLP+L++ L+ ++K+DP + I +E+GEH+++G GELHL++ L +++D+ E+ S+P+V +RETV EK KSPNKHNR Y E PL+ + +AI+DG I K + I+ G D++ A+ + C G N+ D+ +G+QYL+E + ++ Sbjct: 341 VGPDRIPVEEVTAGNIAAIVGLKGAIAGSTVSSIE---NMEPFEPMIHYSEPVVTLAIEAKHTADLPRLIDVLRDISKADPSIQVDINQETGEHLISGMGELHLDVTLYRIKNDYK--IEVETSEPIVVYRETV-EKKGGPFEGKSPNKHNRFYFEVEPLKPEVIQAIEDGDIPQGSKFKDKKTIIETLVSKGIDREEARGLVC----VEGTNIMFDVTRGIQYLDETMELLI 563
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_HALMA (Elongation factor 2 OS=Haloarcula marismortui GN=fusA PE=3 SV=1) HSP 1 Score: 133.265 bits (334), Expect = 1.264e-30 Identity = 83/233 (35.62%), Postives = 132/233 (56.65%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700 I+MG ++E V+ VP GN A+ GL I +T+++E+ P +++ PV+ +V+ + DLPKL+E L+++AK DP + I E++GEH+++G GELHLE+ + ++ + G I +P+V +RE E S R V +SPN HNR Y+ PL E + E I G D P+ + +E G DKD ++ I G N+ +D KG+Q+LNE + V+ Sbjct: 341 IYMGGEREEVDRVPAGNIAAVTGLKDAIA-GSTVSSEEMT---PFESIEHISEPVITKSVEAQNMDDLPKLIETLQQVAKEDPTIQVEINEDTGEHLISGQGELHLEVIGQRIERN--QGIPINTGEPIVVYREAPQEDS-REVEGRSPNNHNRFYISIEPLGEDIVETIKMGE-ASMDMPELERREALQEAGMDKDDSQNI----EHIHGTNILLDETKGIQHLNETMELVI 561
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_METMP (Elongation factor 2 OS=Methanococcus maripaludis GN=fusA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30 Identity = 81/236 (34.32%), Postives = 134/236 (56.78%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPK---ARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700 I+MG ++ V + GN A+ GL + T T+ + E+ ++ + PV+ VA++ K DLPKL+E L+++A+ D V I EE+GEH+++G GELH+E+ + + + GG E+ +P+V +RET++ S + KSPNKHN+LYM A P+EE + A +G++ D K A + E G +KD AKK+ NM V+M +G+ L+E ++ ++ Sbjct: 340 IFMGAERVQVPSISAGNICALTGLRE-ATAGETVCSPSEILEPGFESLSHTSEPVITVAIEAKNTKDLPKLIEILRQIAREDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIVVYRETIMGTSPE-IEGKSPNKHNKLYMIAEPMEESVYAAYVEGKLHDEDYKKKTTADGEARLVEAGLEKDQAKKVM----SIYNGNMIVNMTRGIVQLDEARELII 568
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_METM5 (Elongation factor 2 OS=Methanococcus maripaludis (strain C5 / ATCC BAA-1333) GN=fusA PE=3 SV=1) HSP 1 Score: 132.88 bits (333), Expect = 1.651e-30 Identity = 81/236 (34.32%), Postives = 134/236 (56.78%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPK---ARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700 I+MG ++ V + GN A+ GL + T T+ + E+ ++ + PV+ VA++ K DLPKL+E L+++A+ D V I EE+GEH+++G GELH+E+ + + + GG E+ +P+V +RET++ S + KSPNKHN+LYM A P+EE + A +G++ D K A + E G +KD AKK+ NM V+M +G+ L+E ++ ++ Sbjct: 340 IFMGAERVQVPSISAGNICALTGLRE-ATAGETVCSPSEILEPGFESLSHTSEPVITVAIEAKNTKDLPKLIEILRQIAREDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIVVYRETIMGTSPE-IEGKSPNKHNKLYMIAEPMEESVYAAYVEGKLHDEDYKKKTTADGEARLVEAGLEKDQAKKVM----SIYNGNMIVNMTRGIVQLDEARELII 568
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_METM7 (Elongation factor 2 OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=fusA PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.156e-30 Identity = 82/236 (34.75%), Postives = 133/236 (56.36%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPK---ARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700 I+MG ++ V + GN A+ GL + T T+ + E+ ++ + PV+ VA++ K DLPKL+E L+++A+ D V I EE+GEH+++G GELH+E+ + + + GG E+ +P+V +RET+ S + KSPNKHN+LYM A P++E + A +G+I D K A + E G DKD AKK+ NM V+M +G+ L+E ++ ++ Sbjct: 340 IFMGAERVQVPSISAGNICALTGLRE-ATAGETVCSPSEILEPGFESLTHTSEPVITVAIEAKNTKDLPKLIEILRQIAREDNTVRVEINEETGEHLISGMGELHIEV-ITNTKIGRDGGIEVDVGEPIVVYRETITGTSPE-IEGKSPNKHNKLYMIAEPMDESVYAAYVEGKIHDEDYKKKTTADGEARLVEAGLDKDQAKKVM----SIYNGNMIVNMTRGIVQLDEARELII 568
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: SN114_SCHPO (114 kDa U5 small nuclear ribonucleoprotein component homolog OS=Schizosaccharomyces pombe GN=cwf10 PE=1 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30 Identity = 77/229 (33.62%), Postives = 126/229 (55.02%), Query Frame = 2 Query: 32 VEDVPCGNTVAMVGLDQFITKNATLTNEK-EVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTIEESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMF------VDMCKGVQYLNEIKDSV 697 V+ G V + G+D I+K AT+ ++ + D + R + V +VAV+ S+LPKL++GL++ KS P+ + +EESGEH + G GE++++ L DL+ + EI SDPV F ET ++ S S +PNK NR+ M PLE+G++ I++G++ K S+ + + WD ++ IW FGP+ G N+ D+ K V LN +K+ + Sbjct: 554 VDGAVAGMLVLLGGVDNSISKTATIVSDNLKDDPYIFRPIAHMSESVFKVAVEPHNPSELPKLLDGLRKTNKSYPLSITKVEESGEHTIFGTGEMYMDCLLYDLRTLY-SEIEIRVSDPVARFCETAVDTSSIKCFSDTPNKKNRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIWAFGPDDRGTNILRDDTLSTDVDKNV--LNSVKEYI 779
BLAST of CF831988 vs. ExPASy Swiss-Prot
Match: EF2_HALSA (Elongation factor 2 OS=Halobacterium salinarium GN=fusA PE=3 SV=2) HSP 1 Score: 131.339 bits (329), Expect = 4.803e-30 Identity = 77/233 (33.05%), Postives = 134/233 (57.51%), Query Frame = 2 Query: 5 IWMGKKQETVEDVPCGNTVAMVGLDQFITKNATLTNEKEVDAHPIRAMKFSVSPVVRVAVQCKVASDLPKLVEGLKRLAKSDPMVVCTI-EESGEHIVAGAGELHLEICLKDLQDDFMGGAEIIKSDPVVSFRETVLEKSCRTVMSKSPNKHNRLYMEARPLEEGLAEAIDDGRIGPRDDPKARSKILSEEFGWDKDLAKKIWCFGPETTGPNMFVDMCKGVQYLNEIKDSVV 700 I+MG ++E V++VP GN A+ GL I +T++NE+ P ++ PV+ +++ + DLPKL+E L++++K DP + I E++GEH+++G GELHLE+ + ++ + G + +P+V +RET S + V SPN+HN+ Y+ L + + E I G + D P+ + + +E G DK+ ++ + G N+F+D KG+Q+LNE + VV Sbjct: 341 IYMGGEREEVDEVPAGNIAAVTGLKDAIA-GSTVSNEEMT---PFESIDHISEPVITKSIEAQNMDDLPKLIETLRQVSKEDPTISIEINEDTGEHLISGQGELHLEVQTQRIERN--QGIPVTTGEPIVVYRETPTSDS-QEVEGVSPNRHNKFYITVEQLSDDVLEEIRLGEVS-MDMPEQERREVLQEAGMDKETSQDV----ENIIGRNIFIDDTKGIQHLNETMELVV 561 The following BLAST results are available for this feature:
BLAST of CF831988 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 409
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF831988 ID=CF831988; Name=CF831988; organism=Citrus sinensis; type=EST; length=704bpback to top |