CF831992
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831992 vs. ExPASy Swiss-Prot
Match: RLP7_YEAST (Ribosome biogenesis protein RLP7 OS=Saccharomyces cerevisiae GN=RLP7 PE=1 SV=1) HSP 1 Score: 112.464 bits (280), Expect = 2.232e-24 Identity = 63/132 (47.73%), Postives = 81/132 (61.36%), Query Frame = 3 Query: 321 LLFIIRIRGINAVDPKTK--KILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY------GKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFK 692 LLFI+R+RG AV+ K KIL LLRL + GVF+K+ K +L + PYV G P+L S++ LI KRG + I L DN+I+E+ LG HGIIC+ED+IHEI T+G F N FL PFK Sbjct: 141 LLFIVRVRGPLAVNIPNKAFKILSLLRLVETNTGVFVKLTKNVYPLLKVIAPYVVIGKPSLSSIRSLIQKRGRIIYKGENEAEPHEIVLNDNNIVEEQLGDHGIICVEDIIHEIATMGESFSVCNFFLQPFK 272
BLAST of CF831992 vs. ExPASy Swiss-Prot
Match: RLP7_CANGA (Ribosome biogenesis protein RLP7 OS=Candida glabrata GN=RLP7 PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.108e-23 Identity = 66/178 (37.08%), Postives = 103/178 (57.87%), Query Frame = 3 Query: 198 SSFTTEPNSTLKSTMKSKKNSFV*SVEAKLKGGFY-----VNPEAKLLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRG---YGKLNKQR---IALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFK 692 S +E N LK T K + ++ + GF N E +LLF++R++G A + K +IL LRL ++ VF+K+ + T ++L + PYV G P+LKS++ LI KR Y + +++ I L DN+I+E+ LG G+IC++D+IHEI T+G +F + N FL PFK Sbjct: 90 SHLPSEKNFFLKVTEKPQSEETDDLIDEDEEDGFEREKVAYNGEEQLLFVLRVKGPVAASIPHKAYRILSTLRLEEVNTAVFIKLTETTFSLLKIIAPYVIVGKPSLKSIRSLIQKRSKIVYKREDEEEAKEIILNDNNIVEEKLGDCGVICIDDIIHEIATLGENFTKCNFFLQPFK 267
BLAST of CF831992 vs. ExPASy Swiss-Prot
Match: RLP7_KLULA (Ribosome biogenesis protein RLP7 OS=Kluyveromyces lactis GN=RLP7 PE=3 SV=2) HSP 1 Score: 107.457 bits (267), Expect = 7.181e-23 Identity = 58/135 (42.96%), Postives = 82/135 (60.74%), Query Frame = 3 Query: 312 EAKLLFIIRIRGINAVD--PKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNK------QRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFK 692 E LLF+IR++G AV K K+L LLRL ++ GVF+K+ K +L V PY+ G P+L S++ LI KR + + I L DN+I+E+ LG G+IC+ED+IHEI T+G +F + FL PFK Sbjct: 134 EPSLLFVIRVKGPTAVKIPAKAYKVLSLLRLVELNTGVFIKLTKDVYPLLKLVSPYIVIGQPSLASIRSLIQKRSRIMWQRPEDKEPKEIILNDNNIVEEKLGDEGVICIEDIIHEISTLGENFSKCTFFLLPFK 268
BLAST of CF831992 vs. ExPASy Swiss-Prot
Match: RLP7_ASHGO (Ribosome biogenesis protein RLP7 OS=Ashbya gossypii GN=RLP7 PE=3 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.037e-21 Identity = 54/134 (40.30%), Postives = 80/134 (59.70%), Query Frame = 3 Query: 315 AKLLFIIRIRGINA--VDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY------GKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFK 692 A LLF++R+RG A + K ++L LLRL ++ GVF+++ +L V PYV G P+L S++ L+ KR G+ + L DN ++E+ LG G+IC+ED+IHEI T+G F + N FL PFK Sbjct: 110 ATLLFVVRVRGPAAAKIPRKAHRVLTLLRLAEVNTGVFVRLTAEVFPLLQVVAPYVVVGRPSLASIRALVQKRARVVHQRAGEAAPVEMVLNDNGVVEERLGDEGVICVEDIIHEIATMGEAFAKCNFFLLPFK 243
BLAST of CF831992 vs. ExPASy Swiss-Prot
Match: RLP7_DEBHA (Ribosome biogenesis protein RLP7 OS=Debaryomyces hansenii GN=RLP7 PE=3 SV=2) HSP 1 Score: 98.2117 bits (243), Expect = 4.357e-20 Identity = 58/137 (42.34%), Postives = 84/137 (61.31%), Query Frame = 3 Query: 315 AKLLFIIRI----RGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGY-----GKLNKQRIA-LTDNSIIEQALGQH-GIICMEDLIHEILTVGPHFKEANNFLWPFK 692 AKLLFIIRI +G+ V K +K+L LLRL + GVF+K+ AT+ +L + PY+ G P+L S+++L KR + + RI L +N ++E G G IC+EDLIHE+ T+G HFK +N++ PFK Sbjct: 92 AKLLFIIRIPDHTKGLK-VPSKARKVLHLLRLNRPNTGVFVKLTPATVPLLKLISPYIVAGKPSLNSIRKLFQKRACISVIDEETKEPRITKLDNNGVVEDKFGDDLGCICIEDLIHELATLGEHFKTVSNWILPFK 227
BLAST of CF831992 vs. ExPASy Swiss-Prot
Match: RL7_ENCCU (60S ribosomal protein L7 OS=Encephalitozoon cuniculi GN=RPL7 PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 5.326e-18 Identity = 48/138 (34.78%), Postives = 83/138 (60.14%), Query Frame = 3 Query: 276 EAKLKGGFYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPF 689 ++ +K GFYV EA+ +I IR PK +K+L+L RL++I V ++ NK+T ML ++ +V +G ++ +++L+Y +G G+ R+ LT+ I + G+ I C+E+L+H I FK+ N+FL+PF Sbjct: 66 KSSMKNGFYVPKEAEFFAVILIRSKCNCPPKVRKVLELFRLKRINTCVLVRNNKSTRKMLQIIKDHVAFGTIGMELLRKLVYTKGSGRNGHVRVKLTNEFIEDMFDGK--IRCIEELVHHIYNGTEMFKKVNSFLYPF 201
BLAST of CF831992 vs. ExPASy Swiss-Prot
Match: RLP7_PICJA (Ribosome biogenesis protein RLP7 (Fragment) OS=Pichia jadinii GN=RLP7 PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.508e-17 Identity = 49/132 (37.12%), Postives = 79/132 (59.85%), Query Frame = 3 Query: 321 LLFIIRIRG-INAVDP-KTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNK------QRIALTDNSIIEQALGQHGIICMEDLIHEILTVGPHFKEANNFLWPFK 692 L I+R G + A P K +K+LQLLRL +I +GVF+K+ + +L + PY P+L++V++L+ KR + +++ L DN+++E+ LG GIIC+ED+IHE + FK +FL PF+ Sbjct: 32 LYLIVRTPGPVGAKIPSKVQKVLQLLRLNKINSGVFVKLTETVYPLLKLLSPYTVIXQPSLQTVRQLVQKRATVTVTHANDEEPRQVKLNDNNLVEEKLGDEGIICIEDIIHETSHLATTFKTVTHFLDPFE 163 The following BLAST results are available for this feature:
BLAST of CF831992 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF831992 ID=CF831992; Name=CF831992; organism=Citrus sinensis; type=EST; length=693bpback to top |