CF831997

Overview
NameCF831997
Unique NameCF831997
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length800
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of CF831997 vs. ExPASy Swiss-Prot
Match: 1433B_SHEEP (14-3-3 protein beta/alpha (Fragments) OS=Ovis aries GN=YWHAB PE=1 SV=2)

HSP 1 Score: 180.259 bits (456), Expect = 1.116e-44
Identity = 106/202 (52.48%), Postives = 122/202 (60.40%), Query Frame = -3
Query:  193 EERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGAD 798
            EERNLLSVAYKNV+GARR+SWR+ISSIEQK E   NE      ++Y                                     KMKGDY RYL+E  +G  ++    ++  AY+ A +I+  E+ PTHPIRLGLALNFSVFYYEILNSP            EAIAELDTL EESYKDSTLIMQLLRDNLTLWTS+ Q D  D
Sbjct:   41 EERNLLSVAYKNVVGARRSSWRVISSIEQKTER--NEKKQQMGKEY-------------------------------------KMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYYEILNSP------------EAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGD 191          
BLAST of CF831997 vs. ExPASy Swiss-Prot
Match: 14338_ORYSJ (Putative 14-3-3-like protein GF14-H OS=Oryza sativa subsp. japonica GN=GF14H PE=3 SV=1)

HSP 1 Score: 174.096 bits (440), Expect = 7.995e-43
Identity = 95/196 (48.47%), Postives = 131/196 (66.84%), Query Frame = -3
Query:  211 EERNLLSVAYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDM 798
            EER L SV +K  IGARRASWRI+ S+EQK  + G++  V TI  Y+ K+E EL ++C+ +L ++    +P A+SG++ VF+ KMKGDY+RYLAEF TG E+K A + +L AY+A                   A  FS+   EI+NSP+RA  +AKQA DEA AE+++ G E YKDS L+MQLL++NL LWTS++
Sbjct:   40 EERLLFSVGFKKTIGARRASWRILESLEQKVTA-GDQPGV-TINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGDYYRYLAEFSTGTEKKAATDQSLMAYQA----------------WPCAQLFSLL--EIMNSPERASQVAKQALDEATAEINSAGVEGYKDSMLMMQLLKENLALWTSEL 215          
BLAST of CF831997 vs. ExPASy Swiss-Prot
Match: 1433X_MAIZE (14-3-3-like protein (Fragment) OS=Zea mays PE=3 SV=1)

HSP 1 Score: 112.079 bits (279), Expect = 3.731e-24
Identity = 54/61 (88.52%), Postives = 57/61 (93.44%), Query Frame = -3
Query:  184 ILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIK 366
            ILNSPDRACNLAKQAFDEAI+ELD+LGEESYKDSTLIMQLL DNLTLWTSD  +DG DEIK
Sbjct:    1 ILNSPDRACNLAKQAFDEAISELDSLGEESYKDSTLIMQLLXDNLTLWTSDTNEDGGDEIK 61          
The following BLAST results are available for this feature:
BLAST of CF831997 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433B_SHEEP1.116e-4452.4814-3-3 protein beta/alpha (Fragments) OS=Ovis arie... [more]
14338_ORYSJ7.995e-4348.47Putative 14-3-3-like protein GF14-H OS=Oryza sativ... [more]
1433X_MAIZE3.731e-2488.5214-3-3-like protein (Fragment) OS=Zea mays PE=3 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C08_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831997 ID=CF831997; Name=CF831997; organism=Citrus sinensis; type=EST; length=800bp
TTTTTTTTTTTTTTTTTAAAAAGAAAACTTAGTACATTCATAATTCCCTA
TCCAAGAGAAGAATGCCTAAATATTCAAAAGCAGGAAACCTAGCAACAAA
CATCTTCTCCCTTTAAAAACAGTGGAGAAAGTTCAATCCCATCTGAATTC
TCACTGTTGTTCGCTTTCAGGCTTGGCCGCTTCTTTAATCTCGTCTGCTC
CATCATCCTGCATGTCGGAGGTCCACAGAGTGAGGTTGTCACGAAGAAGT
TGCATGATCAAAGTGCTATCCTTGTAGGACTCCTCACCCAGGGTATCCAA
CTCAGCAATTGCCTCGTCAAAAGCCTGCTTGGCCAAATTGCAAGCACGAT
CAGGAGAGTTCAGGATCTCATAGTAAAACACAGAGAAGTTCAGAGCCAGT
CCTAAACGGATGGGATGAGTCGGAGCCAATTCTGCATTTGCAATATCCTG
AGCGGCTTTATAAGCAGTGAGGGTACTCTCGGCGGCTTCCTTACGCTCGG
CTCCGGTCTTGAACTCAGCCAAGTACCTGTGATAATCTCCCTTCATCTTC
AAATAGAAAACCTTGGAGTCACCAGAAGAAGCGCAAGGAATGAGGCGGGA
GTCAAGAAGCTTCAAGATGCCGTCGCAGATCGAGGAAAGCTCGGTCTCGA
TCTTGGAGCGGTAATCTCGGATCGTGGAGACGTGGTCCTCGTTGCCGCGG
CTCTCCTCTTTCTGTTCGATGGAGGAAATAATGCGCCAGCTGGCACGGCG
GGCGCCGATGACGTTCTTGTAAGCGACGGAGAGGAGGTTGCGTTCCTCAA
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