CF831999

Overview
NameCF831999
Unique NameCF831999
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length689
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig11031 contig Csv1_Contig11031:462..1150. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_LISIN (50S ribosomal protein L19 OS=Listeria innocua GN=rplS PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15
Identity = 40/87 (45.98%), Postives = 61/87 (70.11%), Query Frame = -1 
Query:  423 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680
            ++P  +PG  V++   + E  R R+   +G+VI RR AGIS TF +R++  GVGVE  FP+++P I +++V+ + KVRRAKLYYLR+
Sbjct:   16 DVPSFRPGDTVRVHAKVVEGTRERIQLFEGVVIKRRGAGISETFTVRKISNGVGVERTFPVHTPRIAKLEVIRRGKVRRAKLYYLRN 102
[Close]
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BACHK (50S ribosomal protein L19 OS=Bacillus thuringiensis subsp. konkukian GN=rplS PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = -1 
Query:  423 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680
            ++P  +PG  +++ V + E  R R+   +G+VI RR  GIS TF +R++  GVGVE  FP+++P I +I+VL + KVRRAKLYYLR+
Sbjct:   16 DLPSFRPGDTLRVHVKVVEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPVHTPRIAKIEVLRRGKVRRAKLYYLRN 102
[Close]
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BACCZ (50S ribosomal protein L19 OS=Bacillus cereus (strain ZK / E33L) GN=rplS PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = -1 
Query:  423 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680
            ++P  +PG  +++ V + E  R R+   +G+VI RR  GIS TF +R++  GVGVE  FP+++P I +I+VL + KVRRAKLYYLR+
Sbjct:   16 DLPSFRPGDTLRVHVKVVEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPVHTPRIAKIEVLRRGKVRRAKLYYLRN 102
[Close]
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BACCR (50S ribosomal protein L19 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplS PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = -1 
Query:  423 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680
            ++P  +PG  +++ V + E  R R+   +G+VI RR  GIS TF +R++  GVGVE  FP+++P I +I+VL + KVRRAKLYYLR+
Sbjct:   16 DLPSFRPGDTLRVHVKVVEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPVHTPRIAKIEVLRRGKVRRAKLYYLRN 102
[Close]
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BACCQ (50S ribosomal protein L19 OS=Bacillus cereus (strain Q1) GN=rplS PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = -1 
Query:  423 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680
            ++P  +PG  +++ V + E  R R+   +G+VI RR  GIS TF +R++  GVGVE  FP+++P I +I+VL + KVRRAKLYYLR+
Sbjct:   16 DLPSFRPGDTLRVHVKVVEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPVHTPRIAKIEVLRRGKVRRAKLYYLRN 102
[Close]
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BACCN (50S ribosomal protein L19 OS=Bacillus cereus subsp. cytotoxis (strain NVH 391-98) GN=rplS PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = -1 
Query:  423 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680
            ++P  +PG  +++ V + E  R R+   +G+VI RR  GIS TF +R++  GVGVE  FP+++P I +I+VL + KVRRAKLYYLR+
Sbjct:   16 DLPSFRPGDTLRVHVKVVEGTRERIQIFEGVVIKRRGGGISETFTVRKVSYGVGVERTFPIHTPRIAKIEVLRRGKVRRAKLYYLRN 102
[Close]
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BACC7 (50S ribosomal protein L19 OS=Bacillus cereus (strain AH187) GN=rplS PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = -1 
Query:  423 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680
            ++P  +PG  +++ V + E  R R+   +G+VI RR  GIS TF +R++  GVGVE  FP+++P I +I+VL + KVRRAKLYYLR+
Sbjct:   16 DLPSFRPGDTLRVHVKVVEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPVHTPRIAKIEVLRRGKVRRAKLYYLRN 102
[Close]
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BACC4 (50S ribosomal protein L19 OS=Bacillus cereus (strain B4264) GN=rplS PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = -1 
Query:  423 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680
            ++P  +PG  +++ V + E  R R+   +G+VI RR  GIS TF +R++  GVGVE  FP+++P I +I+VL + KVRRAKLYYLR+
Sbjct:   16 DLPSFRPGDTLRVHVKVVEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPVHTPRIAKIEVLRRGKVRRAKLYYLRN 102
[Close]
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BACC3 (50S ribosomal protein L19 OS=Bacillus cereus (strain 03BB102) GN=rplS PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = -1 
Query:  423 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680
            ++P  +PG  +++ V + E  R R+   +G+VI RR  GIS TF +R++  GVGVE  FP+++P I +I+VL + KVRRAKLYYLR+
Sbjct:   16 DLPSFRPGDTLRVHVKVVEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPVHTPRIAKIEVLRRGKVRRAKLYYLRN 102
[Close]
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BACC2 (50S ribosomal protein L19 OS=Bacillus cereus (strain G9842) GN=rplS PE=3 SV=1)

HSP 1 Score: 83.5741 bits (205), Expect = 1.101e-15
Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = -1 
Query:  423 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680
            ++P  +PG  +++ V + E  R R+   +G+VI RR  GIS TF +R++  GVGVE  FP+++P I +I+VL + KVRRAKLYYLR+
Sbjct:   16 DLPSFRPGDTLRVHVKVVEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPVHTPRIAKIEVLRRGKVRRAKLYYLRN 102
The following BLAST results are available for this feature:
BLAST of CF831999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
RL19_LISIN1.101e-1545.9850S ribosomal protein L19 OS=Listeria innocua GN=r... [more]
RL19_BACHK1.101e-1547.1350S ribosomal protein L19 OS=Bacillus thuringiensi... [more]
RL19_BACCZ1.101e-1547.1350S ribosomal protein L19 OS=Bacillus cereus (stra... [more]
RL19_BACCR1.101e-1547.1350S ribosomal protein L19 OS=Bacillus cereus (stra... [more]
RL19_BACCQ1.101e-1547.1350S ribosomal protein L19 OS=Bacillus cereus (stra... [more]
RL19_BACCN1.101e-1547.1350S ribosomal protein L19 OS=Bacillus cereus subsp... [more]
RL19_BACC71.101e-1547.1350S ribosomal protein L19 OS=Bacillus cereus (stra... [more]
RL19_BACC41.101e-1547.1350S ribosomal protein L19 OS=Bacillus cereus (stra... [more]
RL19_BACC31.101e-1547.1350S ribosomal protein L19 OS=Bacillus cereus (stra... [more]
RL19_BACC21.101e-1547.1350S ribosomal protein L19 OS=Bacillus cereus (stra... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C09_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF831999 ID=CF831999; Name=CF831999; organism=Citrus sinensis; type=EST; length=689bp
TTTTAAACAGACCCATTACCTTCATCTCCATATTATTAACCGAGTACATG
CAGCCTTACGCGTATTGATGGAAGAAATGAGCTGTCTCTGGCGCAATGCC
CATGTTCAAATGCATGATCTATAATTACAAAACAAGACCTTTTATGGGTA
ACATTAATGAAGCCAAAATTTTACCACTTCTAGCGGCTTTCTGGGGATTC
CATTCAAGTTTGGAACTCCTTGCCCCTCCCAACCATGCCAGCACAGCAAT
TAACAGAGATGCTAAACTAAACCTTAATTGGAAAAAGAAAGGGTAAAATG
AAAACACAAATAGTTTGTGAAATTTGTCACCAATGCAATACAACCCAACT
ATCCATCACAAGGAACTCACAGAATCCTCCCACCAATAAAGCTTCTTATT
TATTTCTAAGTGGATTCAGCTTATCCCTCAGATAGTAAAGCTTGGCCCTC
CTCACTTTCTTCTTGTCCAGCACCTTTATTTCTAGTATATTAGGTGAGTA
CAAAGGGAAAAGAGATTCGACTCCAACCCCTGCNACCAGCCTCCTCAATC
TAAATGTAGTACTTATACCAGCATTACGCCTTGCTATAACAATACCCTTT
AAAGTTGAAACACGTCTCTTGTTCTCTGGAATTACCACTTTTAGTTGCAC
GATATAACCAGGCTTTATATCGGGGATCTCCCTCTGTGA
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