CF831999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_METSB (50S ribosomal protein L19 OS=Methylocella silvestris (strain BL2 / DSM 15510 / NCIMB 13906) GN=rplS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.438e-15 Identity = 42/89 (47.19%), Postives = 61/89 (68.54%), Query Frame = -1 Query: 420 REIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 683 + IP+ +PG V + V + E +R RV +G+ IAR G++ +F +R++ G GVE +F +YSPNI IKV+ + KVRRAKLYYLRD+ Sbjct: 19 KTIPEFQPGDTVIVNVKVKEGERTRVQAYEGVCIARNGGGLNESFTVRKISYGEGVERVFAIYSPNIDSIKVVRRGKVRRAKLYYLRDR 107
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_METNO (50S ribosomal protein L19 OS=Methylobacterium nodulans (strain ORS2060 / LMG 21967) GN=rplS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.438e-15 Identity = 43/89 (48.31%), Postives = 59/89 (66.29%), Query Frame = -1 Query: 420 REIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 683 + IPD +PG V + V + E R RV +G+ IAR G++ F +R++ G GVE +FP+YSP I IKV+ + KVRRAKLYYLRD+ Sbjct: 17 KTIPDFEPGDTVVVNVKVKEGDRTRVQAYEGVCIARAGGGLNENFTVRKISYGEGVERVFPIYSPLIDSIKVVRRGKVRRAKLYYLRDR 105
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_GEOSF (50S ribosomal protein L19 OS=Geobacter sp. (strain FRC-32) GN=rplS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.438e-15 Identity = 42/88 (47.73%), Postives = 63/88 (71.59%), Query Frame = -1 Query: 426 QREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 686 ++ IP +PG V+++V I E +K R+ +G+VI R+N GI +F +R++ GVGVE FPL+SP+I I+V+ + +VRRAKLYYLR Sbjct: 13 KKNIPGFRPGDTVKVQVKIVEGDKSRIQAFQGVVIGRQNGGIRESFTVRKISNGVGVERSFPLHSPSIDAIEVITRGQVRRAKLYYLR 100
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_CORDI (50S ribosomal protein L19 OS=Corynebacterium diphtheriae GN=rplS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.438e-15 Identity = 41/87 (47.13%), Postives = 61/87 (70.11%), Query Frame = -1 Query: 423 EIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680 +IP +PG + + V VI +K R+ KG+VI R+ AG+ TF +R++ G+GVE FP+++PNI +I+V+ + VRRAKLYYLRD Sbjct: 15 DIPAFRPGDTLNVHVKVIEGSKSRIQVFKGVVIRRQGAGVRETFTIRKVSFGIGVERTFPVHTPNIDKIEVVTRGDVRRAKLYYLRD 101
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BIFAA (50S ribosomal protein L19 OS=Bifidobacterium adolescentis (strain ATCC 15703 / DSM 20083) GN=rplS PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.438e-15 Identity = 44/87 (50.57%), Postives = 58/87 (66.67%), Query Frame = -1 Query: 423 EIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680 EIP +PG V++ V I E N R+ G+VIAR+ G+ TF +R++ G GVE FPL+SP I IKV+ K +VRRAKLYYLR+ Sbjct: 18 EIPAFRPGDTVEVNVKIKEGNNSRIQAFTGVVIARQGGGVRETFVVRKISFGTGVERRFPLHSPAIDSIKVVRKGRVRRAKLYYLRN 104
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_BACWK (50S ribosomal protein L19 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplS PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.438e-15 Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = -1 Query: 423 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680 ++P +PG +++ V + E R R+ +G+VI RR GIS TF +R++ GVGVE FP+++P I I+VL + KVRRAKLYYLR+ Sbjct: 16 DLPSFRPGDTLRVHVKVVEGTRERIQLFEGVVIKRRGGGISETFTVRKISYGVGVERTFPVHTPRIANIEVLRRGKVRRAKLYYLRN 102
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ANAVT (50S ribosomal protein L19 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplS PE=3 SV=2) HSP 1 Score: 83.1889 bits (204), Expect = 1.438e-15 Identity = 47/88 (53.41%), Postives = 62/88 (70.45%), Query Frame = -1 Query: 417 IPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 677 +P+I G V++ V I E +K RV +G+VIARRN GI+ T +RR+ GVGVE +F L+SP I IKVL + KVRRAKLYYLR ++ Sbjct: 19 LPEIYIGDTVRVGVKIKEGDKYRVQPYEGVVIARRNGGINETITVRRVFQGVGVERVFLLHSPRIDNIKVLRRGKVRRAKLYYLRGRV 106
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_RHOE4 (50S ribosomal protein L19 OS=Rhodococcus erythropolis (strain PR4 / NBRC 100887) GN=rplS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.878e-15 Identity = 41/87 (47.13%), Postives = 59/87 (67.82%), Query Frame = -1 Query: 423 EIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680 +IP+ +PG + + V VI +K RV KG+VI R+ G+ TF +R++ GVGVE FP++SP + I+VL + VRRAKLYYLR+ Sbjct: 15 DIPEFRPGDTLNVNVKVIEGSKERVQVFKGVVIRRQGGGVRETFTVRKVSFGVGVERTFPVHSPTLASIEVLTRGDVRRAKLYYLRE 101
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_NOVAD (50S ribosomal protein L19 OS=Novosphingobium aromaticivorans (strain DSM 12444) GN=rplS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.878e-15 Identity = 43/91 (47.25%), Postives = 62/91 (68.13%), Query Frame = -1 Query: 420 SQREIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 689 +++EIPD + G V++ V + E +R RV +G+ IAR N G+ + F +R++ G GVE +FPLYSPNI I V+ + VRRAKLYYLR + Sbjct: 17 AKKEIPDFRAGDTVRVGVRVVEGERTRVQAYEGVCIARSNRGLGSNFTVRKISFGEGVERVFPLYSPNIDSITVVRRGVVRRAKLYYLRGR 107
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_MESSB (50S ribosomal protein L19 OS=Mesorhizobium sp. (strain BNC1) GN=rplS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.878e-15 Identity = 39/91 (42.86%), Postives = 63/91 (69.23%), Query Frame = -1 Query: 420 SQREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 689 ++R +PD PG ++++V + E N+ RV +G+ IAR +G+ F +R++ G GVE +FP+YSP + ++V+ + KVRRAKLYYLRD+ Sbjct: 17 AKRTLPDFSPGDTLRVQVRVTEGNRTRVQAFEGVCIARSGSGLQENFTVRKISYGEGVERVFPVYSPLVEAVEVVRRGKVRRAKLYYLRDR 107 The following BLAST results are available for this feature:
BLAST of CF831999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831999 ID=CF831999; Name=CF831999; organism=Citrus sinensis; type=EST; length=689bpback to top |