CF831999
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_EXISA (50S ribosomal protein L19 OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b) GN=rplS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.878e-15 Identity = 41/87 (47.13%), Postives = 60/87 (68.97%), Query Frame = -1 Query: 423 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRD 680 ++P +PG V++ V + E R R+ +G+VI R+ GIS TF +R++ GVGVE FPL+SP + +I+V+ KVRRAKLYYLR+ Sbjct: 18 DVPAFRPGDTVRVHVKVVEGTRERIQIFEGVVIKRKGGGISETFTVRKISYGVGVERAFPLHSPRVAQIEVVRYGKVRRAKLYYLRN 104
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_DESAP (50S ribosomal protein L19 OS=Desulforudis audaxviator (strain MP104C) GN=rplS PE=3 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.878e-15 Identity = 41/86 (47.67%), Postives = 60/86 (69.77%), Query Frame = -1 Query: 426 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 680 +IP+ +PG V++ V + E +R R+ +G+VI RR G+S TF +RR+ GVGVE FPL+SP + I+V+ +VRRA+LYYLR Sbjct: 15 DIPEFRPGDTVRVHVKVVEGERQRIQVFEGVVIRRRGGGVSETFTVRRVSYGVGVERTFPLHSPRVDRIEVVRLGRVRRARLYYLR 100
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_ANASP (50S ribosomal protein L19 OS=Anabaena sp. (strain PCC 7120) GN=rplS PE=3 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.878e-15 Identity = 46/88 (52.27%), Postives = 62/88 (70.45%), Query Frame = -1 Query: 417 IPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 677 +P+I G V++ V I E ++ RV +G+VIARRN GI+ T +RR+ GVGVE +F L+SP I IKVL + KVRRAKLYYLR ++ Sbjct: 19 LPEIYIGDTVRVGVKIKEGEKYRVQPYEGVVIARRNGGINETITVRRVFQGVGVERVFLLHSPRIDNIKVLRRGKVRRAKLYYLRGRV 106
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_STAAN (50S ribosomal protein L19 OS=Staphylococcus aureus (strain N315) GN=rplS PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.453e-15 Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = -1 Query: 426 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 680 ++P +PG +++ V I E R R+ +GIVI RR G+S TF +R++ +GVGVE FPL++P I +I+V + KVRRAKLYYLR Sbjct: 18 DLPSFRPGDTLRVHVRIIEGTRERIQVFEGIVIKRRGGGVSETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLR 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_STAAM (50S ribosomal protein L19 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) GN=rplS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.453e-15 Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = -1 Query: 426 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 680 ++P +PG +++ V I E R R+ +GIVI RR G+S TF +R++ +GVGVE FPL++P I +I+V + KVRRAKLYYLR Sbjct: 18 DLPSFRPGDTLRVHVRIIEGTRERIQVFEGIVIKRRGGGVSETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLR 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_STAA9 (50S ribosomal protein L19 OS=Staphylococcus aureus (strain JH9) GN=rplS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.453e-15 Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = -1 Query: 426 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 680 ++P +PG +++ V I E R R+ +GIVI RR G+S TF +R++ +GVGVE FPL++P I +I+V + KVRRAKLYYLR Sbjct: 18 DLPSFRPGDTLRVHVRIIEGTRERIQVFEGIVIKRRGGGVSETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLR 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_STAA2 (50S ribosomal protein L19 OS=Staphylococcus aureus (strain JH1) GN=rplS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.453e-15 Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = -1 Query: 426 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 680 ++P +PG +++ V I E R R+ +GIVI RR G+S TF +R++ +GVGVE FPL++P I +I+V + KVRRAKLYYLR Sbjct: 18 DLPSFRPGDTLRVHVRIIEGTRERIQVFEGIVIKRRGGGVSETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLR 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_STAA1 (50S ribosomal protein L19 OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=rplS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.453e-15 Identity = 42/86 (48.84%), Postives = 60/86 (69.77%), Query Frame = -1 Query: 426 EIPDIKPGYIVQLKVVIPENKR-RVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLR 680 ++P +PG +++ V I E R R+ +GIVI RR G+S TF +R++ +GVGVE FPL++P I +I+V + KVRRAKLYYLR Sbjct: 18 DLPSFRPGDTLRVHVRIIEGTRERIQVFEGIVIKRRGGGVSETFTVRKISSGVGVERTFPLHTPKIEKIEVKRRGKVRRAKLYYLR 103
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_RHIME (50S ribosomal protein L19 OS=Rhizobium meliloti GN=rplS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.453e-15 Identity = 40/91 (43.96%), Postives = 62/91 (68.13%), Query Frame = -1 Query: 420 SQREIPDIKPGYIVQLKV-VIPENKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDK 689 ++R +P+ PG V++ V V+ N+ RV +G+ IAR GI+ +F +R++ G GVE +FP+YSP + + V+ + KVRRAKLYYLRD+ Sbjct: 17 AKRTLPEFSPGDTVRVNVRVVEGNRTRVQAYEGVCIARSGGGINESFTVRKISYGEGVERVFPVYSPLVESVDVVRRGKVRRAKLYYLRDR 107
BLAST of CF831999 vs. ExPASy Swiss-Prot
Match: RL19_PROMP (50S ribosomal protein L19 OS=Prochlorococcus marinus subsp. pastoris (strain CCMP1986 / MED4) GN=rplS PE=3 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.453e-15 Identity = 41/91 (45.05%), Postives = 64/91 (70.33%), Query Frame = -1 Query: 417 QREIPDIKPGYIVQLKVVIPE-NKRRVSTLKGIVIARRNAGISTTFRLRRLVAGVGVESLFPLYSPNILEIKVLDKKKVRRAKLYYLRDKL 686 ++++P+I G V++ V I E NK RV +G+VIA+R+ G+ T +RR+ G+GVE +F L+SP + +KV + KVRRAKL+YLRD++ Sbjct: 58 KKQLPEIYVGDTVKVGVKITEGNKERVQPYEGVVIAKRHGGLHQTITVRRIFQGIGVERVFMLHSPQVASLKVERRGKVRRAKLFYLRDRV 148 The following BLAST results are available for this feature:
BLAST of CF831999 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF831999 ID=CF831999; Name=CF831999; organism=Citrus sinensis; type=EST; length=689bpback to top |