CF832011

Overview
NameCF832011
Unique NameCF832011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig2871 contig Csv1_Contig2871:343..1176. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL3_PETCR (Phenylalanine ammonia-lyase 3 OS=Petroselinum crispum GN=PAL3 PE=2 SV=1)

HSP 1 Score: 366.696 bits (940), Expect = 9.017e-101
Identity = 176/222 (79.28%), Postives = 202/222 (90.99%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKT+EAV+ILKLMS+TFLV LCQAIDLRHLEENLK TVKNTVSQVAK+VLT+G +GELHPSRFCEKDLL+  DRE++FAYIDDPCSATYPLMQKLR+ LVEHALNNG+ E+  ++SIFQKIAAFE+ELK +LPKEVE AR  +E+G+P IPNRIKECRSYPLY+ VREELG+ +LTGEKV SPGEEF+KVFTAM +G+IIDP+LECL  WNGA
Sbjct:  492 VNSLGLISSRKTSEAVEILKLMSTTFLVGLCQAIDLRHLEENLKSTVKNTVSQVAKRVLTMGVNGELHPSRFCEKDLLRVVDREYIFAYIDDPCSATYPLMQKLRETLVEHALNNGDKERNLSTSIFQKIAAFEDELKALLPKEVETARAALESGNPAIPNRIKECRSYPLYKFVREELGTEYLTGEKVRSPGEEFEKVFTAMSKGEIIDPLLECLESWNGA 713
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL1_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=TPA1 PE=2 SV=1)

HSP 1 Score: 366.311 bits (939), Expect = 1.178e-100
Identity = 177/222 (79.73%), Postives = 200/222 (90.09%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENLK+ VKNTVSQVAK+ LT+GA+GELHP+RFCEK+LL+  DRE++FAY DDPCS  YPLMQKLRQVLV+HA+NNGE+EK  NSSIFQKI AFE+ELK VLPKEVE+AR  +E+G+P IPNRI ECRSYPLYR VR+ELG+  LTGEKV SPGEE DKVFTAMC G+IIDPMLECL+ WNGA
Sbjct:  489 VNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLKNAVKNTVSQVAKRTLTMGANGELHPARFCEKELLRIVDREYLFAYADDPCSCNYPLMQKLRQVLVDHAMNNGESEKNVNSSIFQKIGAFEDELKAVLPKEVESARAALESGNPAIPNRITECRSYPLYRFVRKELGTELLTGEKVRSPGEECDKVFTAMCNGQIIDPMLECLKSWNGA 710
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PALY_TRISU (Phenylalanine ammonia-lyase OS=Trifolium subterraneum GN=PAL1 PE=3 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.538e-100
Identity = 178/222 (80.18%), Postives = 201/222 (90.54%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKT EA++IL+LMSSTFL+ALCQAIDLRHLEENLK++VKNTVSQVAKK LT+G SGELHPSRFCEKDLLK  DREHVF+YIDDPCSATYPL QKLRQVLV+HAL NGE+EK +N+SIFQKIA FEEELKT+LPKEVE+AR   ENG+ TI N+I  CRSYPLY+ VREELG++ LTGE+V SPGEE DK+FTAMCQGKIIDP+L+CL EWNGA
Sbjct:  499 VNSLGLISSRKTKEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVAKKTLTIGVSGELHPSRFCEKDLLKVVDREHVFSYIDDPCSATYPLAQKLRQVLVDHALVNGESEKNSNTSIFQKIATFEEELKTLLPKEVESARTAYENGNSTIANKINGCRSYPLYKFVREELGTSLLTGERVISPGEECDKLFTAMCQGKIIDPLLKCLGEWNGA 720
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PALY_MALDO (Phenylalanine ammonia-lyase (Fragment) OS=Malus domestica GN=PAL PE=2 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.538e-100
Identity = 178/222 (80.18%), Postives = 198/222 (89.19%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKTAEAVDILKLMSSTFLVALCQ+IDLRHLEENL++TVKNTVSQVAK+ LT G +GELHPSRFCEKDLLK  DRE+VFAYIDDPCSATYPLMQKLR+VL+EHAL NGE+EK A++SIFQKI AFEEELK +LPKEVE+AR  +E G+  +PNRI ECRSYPLY+ VREELG  +LTGEKV SPGEE DKVF A+CQGKIIDP+L CL  WNGA
Sbjct:    9 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQSIDLRHLEENLRNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKVVDREYVFAYIDDPCSATYPLMQKLREVLIEHALTNGESEKNASTSIFQKIGAFEEELKALLPKEVESARSAIEGGNAAVPNRIAECRSYPLYKFVREELGGEYLTGEKVRSPGEECDKVFQAICQGKIIDPILGCLEGWNGA 230
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL3_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 365.925 bits (938), Expect = 1.538e-100
Identity = 181/222 (81.53%), Postives = 199/222 (89.64%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENL++ VKNTVSQVAK+ LT+GA+GELHPSRFCEKDLL+  DRE+VF Y DD CSA YPLMQKLRQVLV+HAL NGENEK ANSSIFQKI AFE ELK VLPKEVE+AR ++ENG+P I NRIKECRSYPLYR VREELG+  LTGEKV SPGEE DKVFTAMC G+IID +LECL+EWNGA
Sbjct:  486 VNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLRNAVKNTVSQVAKRTLTMGANGELHPSRFCEKDLLRVVDREYVFRYADDACSANYPLMQKLRQVLVDHALENGENEKNANSSIFQKILAFEGELKAVLPKEVESARISLENGNPAIANRIKECRSYPLYRFVREELGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGA 707
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PALY_MEDSA (Phenylalanine ammonia-lyase OS=Medicago sativa PE=2 SV=1)

HSP 1 Score: 365.54 bits (937), Expect = 2.009e-100
Identity = 178/222 (80.18%), Postives = 200/222 (90.09%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLIS+RKT EA++IL+LMSSTFL+ALCQAIDLRHLEENLK++VKNTVSQVAKK LT+G +GELHPSRFCEKDLLK  DREHVFAYIDDPCSATYPL QKLRQVLV+HAL NGE+EK  N+SIFQKIA FEEELKT+LPKEVE+AR   E+G+PTIPN+I  CRSYPLY+ VREELG+  LTGE V SPGEE DK+F+AMCQGKIIDP+LECL EWNGA
Sbjct:  499 VNSLGLISARKTNEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVAKKTLTMGVNGELHPSRFCEKDLLKVVDREHVFAYIDDPCSATYPLSQKLRQVLVDHALVNGESEKNFNTSIFQKIATFEEELKTLLPKEVESARTAYESGNPTIPNKINGCRSYPLYKFVREELGTGLLTGENVISPGEECDKLFSAMCQGKIIDPLLECLGEWNGA 720
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PALY_STYHU (Phenylalanine ammonia-lyase OS=Stylosanthes humilis GN=PAL17.1 PE=2 SV=1)

HSP 1 Score: 365.155 bits (936), Expect = 2.624e-100
Identity = 179/222 (80.63%), Postives = 195/222 (87.84%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLIS+RKT EAV+ILKLMS T+L+ALCQAIDLRHLEENLK+TVKNTVSQVAK+ LT G +GELHPSRFCEKDLLK  DRE+ FAYIDDPCSATYPLMQKLRQVLVEHAL N ENEK  N+SIFQKI  FEEELKT+LPKEVE AR   ENG   IPN+IKECRSYPLY+ VREELG+  LTGEKV SPGEE DK+FTAMCQGKIIDP+LEC+ EWNGA
Sbjct:  489 VNSLGLISARKTNEAVEILKLMSPTYLIALCQAIDLRHLEENLKNTVKNTVSQVAKRTLTTGVNGELHPSRFCEKDLLKIVDREYCFAYIDDPCSATYPLMQKLRQVLVEHALANAENEKNVNTSIFQKITTFEEELKTLLPKEVEGARIAYENGQSAIPNKIKECRSYPLYKFVREELGTEMLTGEKVRSPGEECDKLFTAMCQGKIIDPLLECIGEWNGA 710
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL1_SOYBN (Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PAL1 PE=3 SV=1)

HSP 1 Score: 363.614 bits (932), Expect = 7.633e-100
Identity = 176/222 (79.28%), Postives = 198/222 (89.19%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKT EA++ILKLMSSTFL+ALCQAIDLRHLEENLK++VKNTVSQV+K++LT G +GELHPSRFCEKDLLK  DRE++F+YIDDPCSATYPLMQKLRQVLV+HAL N E EK  NSSIFQKIA FEEELK +LPKEVE AR   E+G   IPN+I+ECRSYPLY+ VREELG+  LTGEKV SPGEEFDK+FTAMCQGKIIDP++ECL EWNGA
Sbjct:  487 VNSLGLISSRKTNEAIEILKLMSSTFLIALCQAIDLRHLEENLKNSVKNTVSQVSKRILTTGVNGELHPSRFCEKDLLKVVDREYIFSYIDDPCSATYPLMQKLRQVLVDHALVNAECEKDVNSSIFQKIAIFEEELKNLLPKEVEGARAAYESGKAAIPNKIQECRSYPLYKFVREELGTGLLTGEKVRSPGEEFDKLFTAMCQGKIIDPLMECLGEWNGA 708
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL2_PETCR (Phenylalanine ammonia-lyase 2 OS=Petroselinum crispum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 363.229 bits (931), Expect = 9.969e-100
Identity = 175/222 (78.83%), Postives = 200/222 (90.09%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKT+EAV+ILKLMS+TFLV LCQAIDLRHLEENLK TVKNTVS VAK+VLT+G +GELHPSRFCEKDLL+  DRE++FAYIDDPCSATYPLMQKLRQ LVEHAL NG+NE+  N+SIFQKIA FE+ELK +LPKEVE+AR  +E+G+P IPNRI+ECRSYPLY+ VR+ELG  +LTGEKVTSPGEEFDKVF AM +G+IIDP+LECL  WNGA
Sbjct:  490 VNSLGLISSRKTSEAVEILKLMSTTFLVGLCQAIDLRHLEENLKSTVKNTVSSVAKRVLTMGVNGELHPSRFCEKDLLRFVDREYIFAYIDDPCSATYPLMQKLRQTLVEHALKNGDNERNMNTSIFQKIATFEDELKALLPKEVESARAALESGNPAIPNRIEECRSYPLYKFVRKELGIEYLTGEKVTSPGEEFDKVFIAMSKGEIIDPLLECLESWNGA 711
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL5_SOLLC (Phenylalanine ammonia-lyase OS=Solanum lycopersicum GN=PAL5 PE=3 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.901e-99
Identity = 174/222 (78.38%), Postives = 199/222 (89.64%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENLK+ VKNTVSQVAKK L +GA+GELHP+RFCEK+LL+  +RE++F Y DDPCS+TYPLMQKLRQVLV+HA+ NGE+EK  NSSIFQKI AFE+ELK VLPKEVE+AR  VE+G+P IPNRI ECRSYPLYRLVR+E+G+  LTGEKV SPGEE DKVFTA C G+IIDP+LECL+ WNGA
Sbjct:  495 VNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLKNAVKNTVSQVAKKTLAMGANGELHPARFCEKELLQVVEREYLFTYADDPCSSTYPLMQKLRQVLVDHAMKNGESEKNLNSSIFQKIVAFEDELKAVLPKEVESARAVVESGNPAIPNRITECRSYPLYRLVRQEVGTELLTGEKVRSPGEEIDKVFTAFCNGQIIDPLLECLKSWNGA 716
The following BLAST results are available for this feature:
BLAST of CF832011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PAL3_PETCR9.017e-10179.28Phenylalanine ammonia-lyase 3 OS=Petroselinum cris... [more]
PAL1_TOBAC1.178e-10079.73Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PALY_TRISU1.538e-10080.18Phenylalanine ammonia-lyase OS=Trifolium subterran... [more]
PALY_MALDO1.538e-10080.18Phenylalanine ammonia-lyase (Fragment) OS=Malus do... [more]
PAL3_TOBAC1.538e-10081.53Phenylalanine ammonia-lyase OS=Nicotiana tabacum P... [more]
PALY_MEDSA2.009e-10080.18Phenylalanine ammonia-lyase OS=Medicago sativa PE=... [more]
PALY_STYHU2.624e-10080.63Phenylalanine ammonia-lyase OS=Stylosanthes humili... [more]
PAL1_SOYBN7.633e-10079.28Phenylalanine ammonia-lyase 1 OS=Glycine max GN=PA... [more]
PAL2_PETCR9.969e-10078.83Phenylalanine ammonia-lyase 2 OS=Petroselinum cris... [more]
PAL5_SOLLC2.901e-9978.38Phenylalanine ammonia-lyase OS=Solanum lycopersicu... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832011 ID=CF832011; Name=CF832011; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTTTTTTTTACCTTATATGAAAAAACCAATAGAAGTGATCGATTT
ATACAGATGAATTTGTACCACTGACTCGCATGGGCCCTTTTAATGAACAC
AAGAACACAAGGGATTGAAGACCGTGTTATTAAACAAAATAAAAACAACT
AACAAATTGGAAGAGGGGCGCCATTCCATTCCCTGAGACATTCCAGCATT
GGATCAATGATCTTGCCCTGGCACATTGCTGTAAACACTTTGTCAAATTC
CTCGCCGGGCGATGTAACTTTTTCCCCTGTTAGAAAATTAGACCCGAGCT
CCTCCCTCACTAACCTGTACAAAGGGTAAGACCTGCATTCTTTGATCCTG
TTGGGAATTGTTGGACTTCCATTCTCAACAGTCTGCCTGGCGTTCTCAAC
TTCTTTGGGCAAAACGGTTTTCAATTCCTCCTCAAAGGCTGCAATCTTCT
GGAAGATTGAAGAGTTGGCAGTCTTCTCGTTCTCTCCATTGTTCAGTGCG
TGCTCAACAAGTACTTGCCTTAGCTTTTGCATCAATGGATAGGTAGCACT
GCAGGGGTCATCAATGTATGCAAAGACGTGTTCGCGATCAGCCGCTTTGA
GCAGATCCTTCTCACAGAATCTTGATGGATGAAGCTCTCCACTAGCACCG
ACGGTTAAGACTTTCTTAGCTACTTGGCTGACAGTATTCTTGACTGTATG
CTTCAAATTCTCCTCCAAATGTCTCAAATCAATAGCCTGGCAAAGCGCTA
CCAAGAATGTGGAAGACATGAGCTTCAGGATGTCGACTGCTTCAGCAGTC
TTCCTGGAAGAGATCAATCCCAAGGAGTTTACAT
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