CF832011

Overview
NameCF832011
Unique NameCF832011
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL1_PETCR (Phenylalanine ammonia-lyase 1 OS=Petroselinum crispum GN=PAL1 PE=1 SV=1)

HSP 1 Score: 361.688 bits (927), Expect = 2.901e-99
Identity = 173/222 (77.93%), Postives = 201/222 (90.54%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKT+EAV+ILKLMS+TFLV LCQAIDLRHLEENLK TVKNTVS VAK+VLT+G +GELHPSRFCEKDLL+  DRE++FAYIDDPCSATYPLMQKLRQ LVEHAL NG+NE+  ++SIFQKIA FE+ELK +LPKEVE+AR  +E+G+P IPNRI+ECRSYPLY+ VR+ELG+ +LTGEKVTSPGEEF+KVF AM +G+IIDP+LECL  WNGA
Sbjct:  490 VNSLGLISSRKTSEAVEILKLMSTTFLVGLCQAIDLRHLEENLKSTVKNTVSSVAKRVLTMGVNGELHPSRFCEKDLLRVVDREYIFAYIDDPCSATYPLMQKLRQTLVEHALKNGDNERNLSTSIFQKIATFEDELKALLPKEVESARAALESGNPAIPNRIEECRSYPLYKFVRKELGTEYLTGEKVTSPGEEFEKVFIAMSKGEIIDPLLECLESWNGA 711
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL2_TOBAC (Phenylalanine ammonia-lyase OS=Nicotiana tabacum GN=PALA PE=2 SV=2)

HSP 1 Score: 360.918 bits (925), Expect = 4.948e-99
Identity = 178/222 (80.18%), Postives = 197/222 (88.74%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSL LIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENL++ VKNTVSQVAK+ LT+G +GELHPSRFCEKDLL+  DRE+VFAY DD CSA YPLMQKLRQVLV+HAL NGENEK ANSSIFQKI AFE+ELK VLPKEVE+AR  +E+G+P I NRIKECRSYPLYR VR ELG+  LTGEKV SPGEE DKVFTAMC G+IID +LECL+EWNGA
Sbjct:  486 VNSLDLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLRNAVKNTVSQVAKRTLTMGTNGELHPSRFCEKDLLRVVDREYVFAYADDACSANYPLMQKLRQVLVDHALQNGENEKNANSSIFQKILAFEDELKAVLPKEVESARAALESGNPAIANRIKECRSYPLYRFVRGELGAELLTGEKVRSPGEECDKVFTAMCNGQIIDSLLECLKEWNGA 707
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL2_PEA (Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 360.918 bits (925), Expect = 4.948e-99
Identity = 175/222 (78.83%), Postives = 200/222 (90.09%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKT EA++IL+LMSSTFL+ALCQAIDLRHLEENLK++VKN VS VAK+ LT G +GELHPSRFCEKDLL+  DREHVF+YIDDPCSATYPLMQKLRQVLV+HAL NGE+EK  N+SIFQKIA FE+ELKT+LPKEVE+AR   ENG+ TI N+IKECRSYPLY+ VREELG++ LTGEKV SPGEE DK+FTA+CQGKIIDP+LECL +WNGA
Sbjct:  498 VNSLGLISSRKTYEAIEILQLMSSTFLIALCQAIDLRHLEENLKNSVKNMVSHVAKRTLTTGINGELHPSRFCEKDLLRVVDREHVFSYIDDPCSATYPLMQKLRQVLVDHALVNGESEKNLNTSIFQKIATFEDELKTLLPKEVESARGAYENGNTTISNKIKECRSYPLYKFVREELGTSLLTGEKVISPGEECDKLFTAICQGKIIDPLLECLGDWNGA 719
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL1_PEA (Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=PAL1 PE=2 SV=1)

HSP 1 Score: 360.533 bits (924), Expect = 6.462e-99
Identity = 172/222 (77.48%), Postives = 199/222 (89.64%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKT EA++IL+LMSSTFL+ALCQA+DLRHLEENLK++VKN VSQVAK+ LT G +GELHPSRFCEKDLL+  DREHVFAYIDDPCSATYPLMQKLRQVLV+HAL NGE+EK  N+SIFQKIA FE+ELKT+LPKEVE+ R   E+G+PT+PN+I  CRSYPLYR VR+ELG+  LTGEKV SPGEE DK+FTA+CQGKIIDP+L+CL +WNGA
Sbjct:  497 VNSLGLISSRKTYEAIEILQLMSSTFLIALCQAVDLRHLEENLKNSVKNIVSQVAKRTLTTGVNGELHPSRFCEKDLLRVVDREHVFAYIDDPCSATYPLMQKLRQVLVDHALVNGESEKNLNTSIFQKIATFEDELKTLLPKEVESTRAAYESGNPTVPNKINGCRSYPLYRFVRQELGTGLLTGEKVISPGEECDKLFTAICQGKIIDPLLQCLGDWNGA 718
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL2_CICAR (Phenylalanine ammonia-lyase 2 OS=Cicer arietinum GN=PAL2 PE=2 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.880e-98
Identity = 173/222 (77.93%), Postives = 197/222 (88.74%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKTAEAV+ILKLMSSTFLVALCQAIDLRH+EENLK  VKNTVSQVAK+VLTVG +GELHPSRFCEKDLL   +RE+VFAYIDDPCSATYPLMQKLR VLV+HAL NG+ E  +++SIFQKI AFE+ELKT+LPKEVE+ R  VENG+P +PNRI ECRSYPLY+ VRE LG++ LTGEK+ SPGEE DKVF A+C G+ IDPML+CL+EWNGA
Sbjct:  492 VNSLGLISSRKTAEAVEILKLMSSTFLVALCQAIDLRHIEENLKSVVKNTVSQVAKRVLTVGVNGELHPSRFCEKDLLNVVEREYVFAYIDDPCSATYPLMQKLRHVLVDHALENGDREGNSSTSIFQKIGAFEQELKTLLPKEVESVRVDVENGNPAVPNRIIECRSYPLYKFVRENLGTSLLTGEKIRSPGEECDKVFAALCDGRFIDPMLDCLKEWNGA 713
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL1_SOLTU (Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum GN=PAL-1 PE=3 SV=1)

HSP 1 Score: 358.992 bits (920), Expect = 1.880e-98
Identity = 173/222 (77.93%), Postives = 198/222 (89.19%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLIS+RKTAEAVDILKLMSST+LVALCQAIDLRHLEENLK  VKNTVSQVAK+ LT+GA GELHP+RFCEK+LL+  DRE++F Y DDPCS+TYPLMQKLRQVLV+HA+ NGE+EK  NSSIFQKI AFE+EL  VLPKEVE+AR  +E+G+P+IPNRI ECRSYPLYRLVR+ELG+  LTGEKV SPGEE +KVFTAMC G+I DP+LECL+ WNGA
Sbjct:  494 VNSLGLISARKTAEAVDILKLMSSTYLVALCQAIDLRHLEENLKSVVKNTVSQVAKRTLTIGAIGELHPARFCEKELLRVVDREYLFTYADDPCSSTYPLMQKLRQVLVDHAMKNGESEKNINSSIFQKIGAFEDELNAVLPKEVESARALLESGNPSIPNRITECRSYPLYRLVRQELGTELLTGEKVRSPGEEIEKVFTAMCNGQINDPLLECLKSWNGA 715
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PALY_BROFI (Phenylalanine ammonia-lyase OS=Bromheadia finlaysoniana GN=PAL PE=2 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 2.456e-98
Identity = 175/222 (78.83%), Postives = 197/222 (88.74%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKTAEAVDILKLMS+TFLV LCQA+DLRHLEENLK+ VKNTVSQVAK+VLT+G +GELHPSRFCEKDL+K  DRE+VFAY DDPCS+TYPLMQKLR V+VEHALNNG  EK +N+SIFQKI++FE ELK  LPKEVE AR   ENGSP I NRIK+CRSYPLY+ V+ E+GS FLTGEKV SPGEEFDKVF A+C+GK IDPML+CL+EWNGA
Sbjct:  478 VNSLGLISSRKTAEAVDILKLMSTTFLVGLCQAVDLRHLEENLKNAVKNTVSQVAKRVLTMGVNGELHPSRFCEKDLIKVIDREYVFAYADDPCSSTYPLMQKLRAVIVEHALNNGVKEKDSNTSIFQKISSFENELKAALPKEVEAARAEFENGSPAIENRIKDCRSYPLYKFVK-EVGSGFLTGEKVVSPGEEFDKVFNAICEGKAIDPMLDCLKEWNGA 698
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL2_PHAVU (Phenylalanine ammonia-lyase class 2 OS=Phaseolus vulgaris PE=3 SV=1)

HSP 1 Score: 358.221 bits (918), Expect = 3.207e-98
Identity = 177/222 (79.73%), Postives = 196/222 (88.29%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKT EA++ILKLMSSTFLVALCQAIDLRHLEENLK+TVKN VSQVAK+ LT G +GELHPSRFCEK LLK  +RE+ FAYIDDPCS TYPLMQKLRQVLV++AL NGENEK  N+SIFQKIA+FEEELKT+LPKEVE AR   EN    IPN+IK+CRSYPLY+ VREELG++ LTGEKV SPGEE DKVF+AMCQGKIIDP+LECL EWNGA
Sbjct:  486 VNSLGLISSRKTNEALEILKLMSSTFLVALCQAIDLRHLEENLKNTVKNVVSQVAKRTLTTGVNGELHPSRFCEKALLKVVEREYTFAYIDDPCSGTYPLMQKLRQVLVDYALANGENEKNLNTSIFQKIASFEEELKTLLPKEVEGARLAYENDQCAIPNKIKDCRSYPLYKFVREELGTSLLTGEKVISPGEECDKVFSAMCQGKIIDPLLECLGEWNGA 707
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL2_POPKI (Phenylalanine ammonia-lyase G2B OS=Populus kitakamiensis GN=PALG2B PE=3 SV=1)

HSP 1 Score: 357.836 bits (917), Expect = 4.188e-98
Identity = 174/222 (78.38%), Postives = 201/222 (90.54%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLISSRKTAEA+DILKLMS+TFLV LC ++DLRH+EENLK+TVK +VSQ+ + VLT+G +GELHPSRFCEKDLLK  DREHVF+YIDDPCSATYPLMQKLRQVLVEHAL NGE  + + +SIFQKI +FEEELKT+LPKEVE+AR  VENG+P IPNRIKECRSYPLY+ VREELG++ LTGEKV SPGEEFDKVFTA+C GK+IDP+LECL+EW+GA
Sbjct:  485 VNSLGLISSRKTAEAIDILKLMSTTFLVGLCHSVDLRHIEENLKNTVKISVSQLPR-VLTMGFNGELHPSRFCEKDLLKVVDREHVFSYIDDPCSATYPLMQKLRQVLVEHALVNGEKVRNSTTSIFQKIGSFEEELKTLLPKEVESARLEVENGNPAIPNRIKECRSYPLYKFVREELGTSLLTGEKVKSPGEEFDKVFTAICAGKLIDPLLECLKEWDGA 705
[Close]
BLAST of CF832011 vs. ExPASy Swiss-Prot
Match: PAL2_IPOBA (Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=2 SV=1)

HSP 1 Score: 357.451 bits (916), Expect = 5.470e-98
Identity = 172/222 (77.48%), Postives = 196/222 (88.29%), Query Frame = -3 
Query:  167 VNSLGLISSRKTAEAVDILKLMSSTFLVALCQAIDLRHLEENLKHTVKNTVSQVAKKVLTVGASGELHPSRFCEKDLLKAADREHVFAYIDDPCSATYPLMQKLRQVLVEHALNNGENEKTANSSIFQKIAAFEEELKTVLPKEVENARQTVENGSPTIPNRIKECRSYPLYRLVREELGSNFLTGEKVTSPGEEFDKVFTAMCQGKIIDPMLECLREWNGA 832
            VNSLGLIS+RKTAEAVD+LKLMSST+LVALCQAIDLRHLEENLK+ V+NTV+QVAK+ LT+G +GELHPSRFCEKDLL+  DRE+VFAY DDPCSA YPL QKLRQVLV+HAL NGE+EK  ++SIFQKIAAFE+ELK VLPKEVE AR  +ENG+P IPNRI ECRSYPLY+ VREELG+  LTGEKV SPGE  DKVFTA+C G IIDP+LECL+ W+GA
Sbjct:  482 VNSLGLISARKTAEAVDVLKLMSSTYLVALCQAIDLRHLEENLKNAVRNTVNQVAKRTLTMGVNGELHPSRFCEKDLLRVVDREYVFAYADDPCSANYPLFQKLRQVLVDHALQNGEHEKNVSTSIFQKIAAFEDELKAVLPKEVEGARSAIENGNPAIPNRITECRSYPLYKFVREELGTEMLTGEKVKSPGEVCDKVFTAVCDGGIIDPLLECLKSWDGA 703
The following BLAST results are available for this feature:
BLAST of CF832011 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 48
Match NameE-valueIdentityDescription
PAL1_PETCR2.901e-9977.93Phenylalanine ammonia-lyase 1 OS=Petroselinum cris... [more]
PAL2_TOBAC4.948e-9980.18Phenylalanine ammonia-lyase OS=Nicotiana tabacum G... [more]
PAL2_PEA4.948e-9978.83Phenylalanine ammonia-lyase 2 OS=Pisum sativum GN=... [more]
PAL1_PEA6.462e-9977.48Phenylalanine ammonia-lyase 1 OS=Pisum sativum GN=... [more]
PAL2_CICAR1.880e-9877.93Phenylalanine ammonia-lyase 2 OS=Cicer arietinum G... [more]
PAL1_SOLTU1.880e-9877.93Phenylalanine ammonia-lyase 1 OS=Solanum tuberosum... [more]
PALY_BROFI2.456e-9878.83Phenylalanine ammonia-lyase OS=Bromheadia finlayso... [more]
PAL2_PHAVU3.207e-9879.73Phenylalanine ammonia-lyase class 2 OS=Phaseolus v... [more]
PAL2_POPKI4.188e-9878.38Phenylalanine ammonia-lyase G2B OS=Populus kitakam... [more]
PAL2_IPOBA5.470e-9877.48Phenylalanine ammonia-lyase OS=Ipomoea batatas PE=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01C18_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C18, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832011 ID=CF832011; Name=CF832011; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTTTTTTTTACCTTATATGAAAAAACCAATAGAAGTGATCGATTT
ATACAGATGAATTTGTACCACTGACTCGCATGGGCCCTTTTAATGAACAC
AAGAACACAAGGGATTGAAGACCGTGTTATTAAACAAAATAAAAACAACT
AACAAATTGGAAGAGGGGCGCCATTCCATTCCCTGAGACATTCCAGCATT
GGATCAATGATCTTGCCCTGGCACATTGCTGTAAACACTTTGTCAAATTC
CTCGCCGGGCGATGTAACTTTTTCCCCTGTTAGAAAATTAGACCCGAGCT
CCTCCCTCACTAACCTGTACAAAGGGTAAGACCTGCATTCTTTGATCCTG
TTGGGAATTGTTGGACTTCCATTCTCAACAGTCTGCCTGGCGTTCTCAAC
TTCTTTGGGCAAAACGGTTTTCAATTCCTCCTCAAAGGCTGCAATCTTCT
GGAAGATTGAAGAGTTGGCAGTCTTCTCGTTCTCTCCATTGTTCAGTGCG
TGCTCAACAAGTACTTGCCTTAGCTTTTGCATCAATGGATAGGTAGCACT
GCAGGGGTCATCAATGTATGCAAAGACGTGTTCGCGATCAGCCGCTTTGA
GCAGATCCTTCTCACAGAATCTTGATGGATGAAGCTCTCCACTAGCACCG
ACGGTTAAGACTTTCTTAGCTACTTGGCTGACAGTATTCTTGACTGTATG
CTTCAAATTCTCCTCCAAATGTCTCAAATCAATAGCCTGGCAAAGCGCTA
CCAAGAATGTGGAAGACATGAGCTTCAGGATGTCGACTGCTTCAGCAGTC
TTCCTGGAAGAGATCAATCCCAAGGAGTTTACAT
back to top