CF832015

Overview
NameCF832015
Unique NameCF832015
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length697
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9630 contig Csv1_Contig9630:826..1522. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 96.6709 bits (239), Expect = 1.278e-19
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +DEHC +LLKNCY ++PE GKV+VVE +LPE  + +   +   H+D++M+  +PGGKER   EF  LA  AGF G        N W +EF K
Sbjct:  277 SDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 94.3597 bits (233), Expect = 6.345e-19
Identity = 43/92 (46.74%), Postives = 58/92 (63.04%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +D HC  LLKNCY ++PE+GKVIVVE +LP     + +++   H+D++M+  +PGGKER   EF  LA GAGF G        N W +EF K
Sbjct:  273 SDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 91.2781 bits (225), Expect = 5.371e-18
Identity = 41/92 (44.57%), Postives = 57/92 (61.96%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +D HC  LLKNCY ++PE+GKVI+VE +LP       +++   H+D++M+  +PGG+ER   EF  LA GAGF G        N W +EF K
Sbjct:  271 SDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 85.8853 bits (211), Expect = 2.257e-16
Identity = 37/92 (40.22%), Postives = 59/92 (64.13%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +DEHC+K+L  CY+S+ + GK+I+VES++P +P  ++ES     LD   ++ + GGKER++ +F  LA+  GF  +       + WVME YK
Sbjct:  273 SDEHCVKILNKCYESLAKGGKIILVESLIPVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 81.6481 bits (200), Expect = 4.256e-15
Identity = 46/94 (48.94%), Postives = 64/94 (68.09%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFG--GISCELAIGNLWVMEFYK 695
            +DE C++ L NC+K++  +GKVI+VE +LPE PNTS ESK  S LD LM I + GG+ERT  ++  L+  +GF    ++C  A  +L VMEFYK
Sbjct:  281 SDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI-TVGGRERTEKQYEKLSKLSGFSKFQVACR-AFNSLGVMEFYK 372          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 80.1073 bits (196), Expect = 1.238e-14
Identity = 43/92 (46.74%), Postives = 59/92 (64.13%), Query Frame = -3
Query:  420 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 695
            +D+  +K+LKNC+K++PE+G VIV+E +LP+V   + ES +    D+LMM  +PGGKERT  EF  LA  AGF           L VMEF+K
Sbjct:  287 DDDRSIKILKNCWKALPENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPISQGLHVMEFHK 378          
BLAST of CF832015 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.372e-12
Identity = 31/60 (51.67%), Postives = 43/60 (71.67%), Query Frame = -3
Query:  516 NDEHCLKLLKNCYKSIPEDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERT 695
            +DEHC KLLKNCY ++P +G+VIV E +LP  P+ S+ +K   H+D +M+    GGKERT
Sbjct:  254 SDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQSLSTKGVIHMDCIMLTHFSGGKERT 313          
The following BLAST results are available for this feature:
BLAST of CF832015 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
OMT1_ORYSJ1.278e-1946.74Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_MAIZE6.345e-1946.74Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_SACOF5.371e-1844.57Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
IMT1_MESCR2.257e-1640.22Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
CHOMT_MEDSA4.256e-1548.94Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
SMT_COPJA1.238e-1446.74(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
COMT1_EUCGL3.372e-1251.67Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C20_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832015 ID=CF832015; Name=CF832015; organism=Citrus sinensis; type=EST; length=697bp
TTTTTTTTTTTTTTTTTGCTTATGAAATAATTTTTCCCCATCCTTTATTC
AGACAGCTTTAGGCTTTTTATAAGAGCCCATTGGAAACACGCAATCTACG
CTAGTAACTGCCCTTGGAACAACAAAAGACACCCTAGACAGTAACACATG
AAATACTAGAAATAATAGGAAATATGGGTAACAATATTGCACAAATAGTT
GATAGACCACGTGTCAAGCACCCATTTATTTCAAAGCACTTATTATTAAG
TCCTAGACTCCTCCTCTCAAGCATGGCTATCAGGTACCTGGGAAGTTTGT
CAAATGCATGGGTTCTTGCTCGTCTTTGGGAGACATATCAGCATGCTTGG
AAAGAGATACACGCAAGACAATCAACACAAGATTTGCTTTATTTCTAGGA
TGCATGGGCATGCACTCTACTTATAGAACTCCATAACCCAGAGATTACCA
ATAGCAAGTTCACAACTGATCCCACCAAAACCAGCGCCAGTAGCCAGGGT
CATGAATTCATGCCTTGTTCTCTCCTTTCCACCGGGACTTTGAATCATCA
TAAGCACGTCCAAATGGGAATTTGATTTTGATTCAATGCTTGTATTAGGA
ACTTCTGGAAGCATTGACTCCACAACGATTACCTTTCCATCTTCTGGGAT
GCTTTTGTAGCAATTCTTCAACAACTTCAAGCAATGTTCATCATTCC
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