CF832016

Overview
NameCF832016
Unique NameCF832016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9630 contig Csv1_Contig9630:825..1505. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 102.064 bits (253), Expect = 2.940e-21
Identity = 47/93 (50.54%), Postives = 61/93 (65.59%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D+HCLK LKN Y ++P+ GKVIV E +LP  P+ S+ +K   H+D +M+  +PGGKERT  EF  LA GAGF G        N +VMEF K
Sbjct:  276 WSDEHCLKFLKNCYAALPEHGKVIVAECILPLSPDPSLATKGVIHIDAIMLAHNPGGKERTEKEFEALAIGAGFKGFKVACCAFNTYVMEFLK 368          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21
Identity = 47/93 (50.54%), Postives = 64/93 (68.82%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D+HCL+LLKN Y ++P++GKVI+VE +LP  P+TS+ +K   H+D +M+  +PGGKERT  EF  LA GAGF G        N  V+EF K
Sbjct:  270 WSDEHCLRLLKNCYDALPENGKVILVECILPVAPDTSLATKGVMHVDAIMLAHNPGGKERTDKEFEGLARGAGFKGFEVMCCAFNTHVIEFRK 362          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 101.679 bits (252), Expect = 3.839e-21
Identity = 48/93 (51.61%), Postives = 63/93 (67.74%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D HCLK LKN Y ++P++GKVI+VE +LP  P+TS+ +K   H+DV+M+  +PGGKERT  EF  LA GAGF G        N  V+EF K
Sbjct:  271 WSDAHCLKFLKNCYDALPENGKVILVECILPVAPDTSLATKGVVHVDVIMLAHNPGGKERTEKEFEGLAKGAGFQGFEVMCCAFNTHVIEFRK 363          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D+HCLKLLKN Y ++P +GKVI+ E +LPEVP++S+ +K   H+DV+ +  +PGGKERT  EF  LA  AGF G        N +++EF K
Sbjct:  247 WSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21
Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D+HCLKLLKN Y ++P +GKVI+ E +LPEVP++S+ +K   H+DV+ +  +PGGKERT  EF  LA  AGF G        N +++EF K
Sbjct:  247 WSDEHCLKLLKNCYDALPNNGKVILAECILPEVPDSSLATKGVVHIDVITVAHNPGGKERTEKEFEALAKAAGFQGFQVFCNAFNTYIIEFSK 339          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21
Identity = 48/93 (51.61%), Postives = 61/93 (65.59%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+DDHC K LKN Y ++P  GKVIV E +LP  P+TS+ +K+  H+D +M+  +PGGKERT+ EF TLA GAGF G           VMEF K
Sbjct:  272 WSDDHCAKFLKNCYDALPNIGKVIVAECVLPVYPDTSLATKNVIHIDCIMLAHNPGGKERTQKEFETLAKGAGFQGFQVMCCAFGTHVMEFLK 364          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 101.293 bits (251), Expect = 5.014e-21
Identity = 46/93 (49.46%), Postives = 62/93 (66.67%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+DDHC+KLLKN Y+++P +GKVI+VE +LPE P+TS  +KS  H D++M+  +PGGKERT  +F  LA    F          + WVMEF K
Sbjct:  267 WSDDHCIKLLKNCYEALPANGKVIIVECILPEAPDTSAATKSKVHGDIIMLAHNPGGKERTEKDFEALANWGWFSRFRKVCCAYHTWVMEFNK 359          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: IEMT_CLABR ((Iso)eugenol O-methyltransferase OS=Clarkia breweri GN=IEMT1 PE=1 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 1.905e-20
Identity = 48/93 (51.61%), Postives = 59/93 (63.44%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D+HCLKLLKN Y ++P  GKVIV E +LP  P+ SI +K   H D LM+  +PGGKERT  EF  LA  +GF G        N +VMEF K
Sbjct:  274 WSDEHCLKLLKNCYAALPDHGKVIVAEYILPPSPDPSIATKVVIHTDALMLAYNPGGKERTEKEFQALAMASGFRGFKVASCAFNTYVMEFLK 366          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT2_OCIBA (Caffeic acid 3-O-methyltransferase 2 OS=Ocimum basilicum GN=COMT2 PE=2 SV=1)

HSP 1 Score: 97.8265 bits (242), Expect = 5.544e-20
Identity = 42/93 (45.16%), Postives = 62/93 (66.67%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D HC+K LK  Y+++P++GKVI+ E +LPE P+T + +K+  H+DV+M+  +PGGKERT  EF  LA  +GF   +      N W+ME  K
Sbjct:  269 WSDAHCVKFLKKCYEALPENGKVILAECVLPEAPDTGLATKNVVHIDVIMLAHNPGGKERTEKEFQVLAKASGFKQFNKVCCAYNSWIMELLK 361          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: OMT1_ARATH (Quercetin 3-O-methyltransferase 1 OS=Arabidopsis thaliana GN=OMT1 PE=1 SV=1)

HSP 1 Score: 97.4413 bits (241), Expect = 7.241e-20
Identity = 41/77 (53.25%), Postives = 58/77 (75.32%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGI 231
            W+D+HC+K LKN Y+S+P+DGKVI+ E +LPE P++S+ +K   H+D +M+  +PGGKERT  EF  LA  +GF GI
Sbjct:  269 WSDEHCVKFLKNCYESLPEDGKVILAECILPETPDSSLSTKQVVHVDCIMLAHNPGGKERTEKEFEALAKASGFKGI 345          
The following BLAST results are available for this feature:
BLAST of CF832016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
COMT1_CLABR2.940e-2150.54Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT3_POPKI3.839e-2150.54Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_POPTM3.839e-2151.61Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
OMT2_CHRAE5.014e-2149.46Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE5.014e-2149.46Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]
COMT1_EUCGU5.014e-2151.61Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_CAPCH5.014e-2149.46Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]
IEMT_CLABR1.905e-2051.61(Iso)eugenol O-methyltransferase OS=Clarkia brewer... [more]
COMT2_OCIBA5.544e-2045.16Caffeic acid 3-O-methyltransferase 2 OS=Ocimum bas... [more]
OMT1_ARATH7.241e-2053.25Quercetin 3-O-methyltransferase 1 OS=Arabidopsis t... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832016 ID=CF832016; Name=CF832016; organism=Citrus sinensis; type=EST; length=681bp
TGGAATGATGACCATTGCTTGAAGTTGTTGAAGAATAGCTACAAAAGCAT
CCCCCAAGATGGAAAGGTAATCGTTGTGGAGTCAATGCTTCCAGAAGTTC
CTAATACAAGCATTGAATCAAAATCAAATTCCCATTTGGACGTGCTTATG
ATGATTCAAAGTCCCGGTGGAAAGGAGAGAACAAGGCATGAATTCATGAC
CCTGGCTACTGGCGCTGGTTTTGGTGGGATCAGTTGTGAACTTGCTATTG
GTAATCTCTGGGTTATGGAGTTCTATAAGTAGAGTGCATGCCCATGCATC
CTAGAAATAAAGCAAATCTTGTGTTGATTGTCTTGCGTGTATCTCTTTCC
AAGCATGCTGATATGTCTCCCAAAGACGAGCAAGAACCCATGCATTTGAC
AAACTTCCCAGGTACCTGATAGCCATGCTTGAGAGGAGGAGTCTAGGACT
TAATAATAAGTGCTTTGAAATAAATGGGTGCTTGACACGTGGTCTATCAA
CTATTTGTGCAATATTGTTACCCATATTTCCTATTATTTCTAGTATTTCA
TGTGTTACTGTCTAGGGTGTCTTTTGTTGTTCCAAGGGCAGTTACTAGCG
TAGATTGCGTGTTTCCAATTGGCTCTTATAAAAAGCCTAAAGCTGTCTGA
ATAAAGGATGCAGAAAAATTATTTCATAAAG
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