CF832016

Overview
NameCF832016
Unique NameCF832016
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length681
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig9630 contig Csv1_Contig9630:825..1505. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: OMT1_ORYSJ (Quercetin 3-O-methyltransferase 1 OS=Oryza sativa subsp. japonica GN=ROMT-9 PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 4.693e-19
Identity = 41/93 (44.09%), Postives = 58/93 (62.37%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D+HC +LLKN Y ++P+ GKV+VVE +LPE  + +   +   H+D++M+  +PGGKER   EF  LA  AGF G        N W +EF K
Sbjct:  276 WSDEHCARLLKNCYDALPEHGKVVVVECVLPESSDATAREQGVFHVDMIMLAHNPGGKERYEREFRELARAAGFTGFKATYIYANAWAIEFTK 368          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_MAIZE (Caffeic acid 3-O-methyltransferase OS=Zea mays PE=3 SV=1)

HSP 1 Score: 93.2041 bits (230), Expect = 1.366e-18
Identity = 42/93 (45.16%), Postives = 58/93 (62.37%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D HC  LLKN Y ++P++GKVIVVE +LP     + +++   H+D++M+  +PGGKER   EF  LA GAGF G        N W +EF K
Sbjct:  272 WSDAHCATLLKNCYDALPENGKVIVVECVLPVNTEATPKAQGVFHVDMIMLAHNPGGKERYEREFRELAKGAGFSGFKATYIYANAWAIEFIK 364          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_SACOF (Caffeic acid 3-O-methyltransferase OS=Saccharum officinarum GN=COMT PE=2 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.156e-17
Identity = 40/93 (43.01%), Postives = 57/93 (61.29%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D HC  LLKN Y ++P++GKVI+VE +LP       +++   H+D++M+  +PGG+ER   EF  LA GAGF G        N W +EF K
Sbjct:  270 WSDAHCATLLKNCYDALPENGKVIIVECVLPVNTEAVPKAQGVFHVDMIMLAHNPGGRERYEREFHDLAKGAGFSGFKATYIYANAWAIEFIK 362          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: IMT1_MESCR (Inositol 4-methyltransferase OS=Mesembryanthemum crystallinum GN=IMT1 PE=1 SV=1)

HSP 1 Score: 85.1149 bits (209), Expect = 3.719e-16
Identity = 36/93 (38.71%), Postives = 59/93 (63.44%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+D+HC+K+L   Y+S+ + GK+I+VES++P +P  ++ES     LD   ++ + GGKER++ +F  LA+  GF  +       + WVME YK
Sbjct:  272 WSDEHCVKILNKCYESLAKGGKIILVESLIPVIPEDNLESHMVFSLDCHTLVHNQGGKERSKEDFEALASKTGFSTVDVICCAYDTWVMELYK 364          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: SMT_COPJA ((S)-scoulerine 9-O-methyltransferase OS=Coptis japonica GN=SMT PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.013e-15
Identity = 43/93 (46.24%), Postives = 59/93 (63.44%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFGGISCELAIGNLWVMEFYK 279
            W+DD  +K+LKN +K++P++G VIV+E +LP+V   + ES +    D+LMM  +PGGKERT  EF  LA  AGF           L VMEF+K
Sbjct:  286 WDDDRSIKILKNCWKALPENGTVIVIEFVLPQVLGNNAESFNALTPDLLMMALNPGGKERTTIEFDGLAKAAGFAETKFFPISQGLHVMEFHK 378          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: CHOMT_MEDSA (Isoliquiritigenin 2'-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 7.013e-15
Identity = 45/95 (47.37%), Postives = 64/95 (67.37%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERTRHEFMTLATGAGFG--GISCELAIGNLWVMEFYK 279
            W+D+ C++ L N +K++  +GKVI+VE +LPE PNTS ESK  S LD LM I + GG+ERT  ++  L+  +GF    ++C  A  +L VMEFYK
Sbjct:  280 WSDEKCIEFLSNCHKALSPNGKVIIVEFILPEEPNTSEESKLVSTLDNLMFI-TVGGRERTEKQYEKLSKLSGFSKFQVACR-AFNSLGVMEFYK 372          
BLAST of CF832016 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.557e-12
Identity = 30/61 (49.18%), Postives = 43/61 (70.49%), Query Frame = 1
Query:    1 WNDDHCLKLLKNSYKSIPQDGKVIVVESMLPEVPNTSIESKSNSHLDVLMMIQSPGGKERT 183
            W+D+HC KLLKN Y ++P +G+VIV E +LP  P+ S+ +K   H+D +M+    GGKERT
Sbjct:  253 WSDEHCAKLLKNCYDALPVNGRVIVAEYILPAYPDQSLSTKGVIHMDCIMLTHFSGGKERT 313          
The following BLAST results are available for this feature:
BLAST of CF832016 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 27
Match NameE-valueIdentityDescription
OMT1_ORYSJ4.693e-1944.09Quercetin 3-O-methyltransferase 1 OS=Oryza sativa ... [more]
COMT1_MAIZE1.366e-1845.16Caffeic acid 3-O-methyltransferase OS=Zea mays PE=... [more]
COMT1_SACOF1.156e-1743.01Caffeic acid 3-O-methyltransferase OS=Saccharum of... [more]
IMT1_MESCR3.719e-1638.71Inositol 4-methyltransferase OS=Mesembryanthemum c... [more]
SMT_COPJA7.013e-1546.24(S)-scoulerine 9-O-methyltransferase OS=Coptis jap... [more]
CHOMT_MEDSA7.013e-1547.37Isoliquiritigenin 2'-O-methyltransferase OS=Medica... [more]
COMT1_EUCGL5.557e-1249.18Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C20_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832016 ID=CF832016; Name=CF832016; organism=Citrus sinensis; type=EST; length=681bp
TGGAATGATGACCATTGCTTGAAGTTGTTGAAGAATAGCTACAAAAGCAT
CCCCCAAGATGGAAAGGTAATCGTTGTGGAGTCAATGCTTCCAGAAGTTC
CTAATACAAGCATTGAATCAAAATCAAATTCCCATTTGGACGTGCTTATG
ATGATTCAAAGTCCCGGTGGAAAGGAGAGAACAAGGCATGAATTCATGAC
CCTGGCTACTGGCGCTGGTTTTGGTGGGATCAGTTGTGAACTTGCTATTG
GTAATCTCTGGGTTATGGAGTTCTATAAGTAGAGTGCATGCCCATGCATC
CTAGAAATAAAGCAAATCTTGTGTTGATTGTCTTGCGTGTATCTCTTTCC
AAGCATGCTGATATGTCTCCCAAAGACGAGCAAGAACCCATGCATTTGAC
AAACTTCCCAGGTACCTGATAGCCATGCTTGAGAGGAGGAGTCTAGGACT
TAATAATAAGTGCTTTGAAATAAATGGGTGCTTGACACGTGGTCTATCAA
CTATTTGTGCAATATTGTTACCCATATTTCCTATTATTTCTAGTATTTCA
TGTGTTACTGTCTAGGGTGTCTTTTGTTGTTCCAAGGGCAGTTACTAGCG
TAGATTGCGTGTTTCCAATTGGCTCTTATAAAAAGCCTAAAGCTGTCTGA
ATAAAGGATGCAGAAAAATTATTTCATAAAG
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