CF832018
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832018 vs. ExPASy Swiss-Prot
Match: RS17_SPOFR (40S ribosomal protein S17 OS=Spodoptera frugiperda GN=RpS17 PE=2 SV=3) HSP 1 Score: 155.992 bits (393), Expect = 1.791e-37 Identity = 76/122 (62.30%), Postives = 102/122 (83.61%), Query Frame = -3 Query: 266 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEP 631 MGRVRTKTVKK+++ +IE+YY+R+TLDF TNK+I EE+AIIP+K LRNKIAGF+THLM+R++ VRGIS+KLQEEERERR ++VP+ SA++ D I+VD +T DML L ++I+GL +P Sbjct: 1 MGRVRTKTVKKAAKIIIEKYYTRLTLDFDTNKRICEEIAIIPTKPLRNKIAGFATHLMRRLRHSQVRGISIKLQEEERERRDNYVPEVSALEHDIIEVDPDTKDMLKMLDFNNINGLQLTQP 122
BLAST of CF832018 vs. ExPASy Swiss-Prot
Match: RS17_ANOGA (40S ribosomal protein S17 OS=Anopheles gambiae GN=RpS17 PE=2 SV=3) HSP 1 Score: 152.91 bits (385), Expect = 1.516e-36 Identity = 75/114 (65.79%), Postives = 97/114 (85.09%), Query Frame = -3 Query: 290 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDI 631 MGRVRTKT+KK+S+ +IE+YY+R+T+DF TNK+I+EEVAIIP+K LRNKIAGF THLMKR++ VRGIS+KLQEEERERR ++VPD SA++ D I+VD ET +ML L ++I Sbjct: 1 MGRVRTKTIKKASKVIIEKYYTRLTMDFDTNKRIVEEVAIIPTKPLRNKIAGFVTHLMKRLRHSQVRGISIKLQEEERERRDNYVPDVSALEQDIIEVDPETKEMLKHLDFNNI 114
BLAST of CF832018 vs. ExPASy Swiss-Prot
Match: RS17_DROME (40S ribosomal protein S17 OS=Drosophila melanogaster GN=RpS17 PE=2 SV=2) HSP 1 Score: 152.525 bits (384), Expect = 1.980e-36 Identity = 76/124 (61.29%), Postives = 99/124 (79.84%), Query Frame = -3 Query: 260 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALGMSDISGLVEVEPQS 631 MGRVRTKTVKK+++ +IE+YY+R+TLDFHTNK+I EEVAIIP+K LRNKIAG+ THLM R++ VRGIS+KLQEEERERR ++VP SA++ D I+VD +T +ML L +I GL +P + Sbjct: 1 MGRVRTKTVKKAAKVIIEKYYTRLTLDFHTNKRICEEVAIIPTKPLRNKIAGYVTHLMGRLRHSQVRGISIKLQEEERERRDNYVPAVSALEQDIIEVDADTKEMLKLLDFHNIRGLQLTQPNT 124
BLAST of CF832018 vs. ExPASy Swiss-Prot
Match: RS17_NEUCR (40S ribosomal protein S17 OS=Neurospora crassa GN=rps-17 PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.586e-36 Identity = 80/134 (59.70%), Postives = 101/134 (75.37%), Query Frame = -3 Query: 248 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAI------KTDEIKVDKETLDMLAALGMSDISGLVEVEPQSMITP 631 MGRVRTKTVKKS++ +IERYY ++TLDF TNK+I +E+AII SKRLRNKIAG++THLMKRIQ+GPVRGIS KLQEEERER+ +VP+ SA+ ++ ++ VD ET D+L LG I V V P + P Sbjct: 1 MGRVRTKTVKKSAKVIIERYYPKLTLDFETNKRICDEIAIIASKRLRNKIAGYTTHLMKRIQRGPVRGISFKLQEEERERKDQYVPEVSALDFTQNSESGQLDVDTETKDLLKHLGFDSIP--VNVIPVTQAQP 132
BLAST of CF832018 vs. ExPASy Swiss-Prot
Match: RS17B_YEAST (40S ribosomal protein S17-B OS=Saccharomyces cerevisiae GN=RPS17B PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35 Identity = 73/127 (57.48%), Postives = 97/127 (76.38%), Query Frame = -3 Query: 263 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDE----IKVDKETLDMLAALGMSDISGLVEVEPQ 631 MGRVRTKTVK++S+ +IERYY ++TLDF TNK++ +E+A I SKRLRNKIAG++THLMKRIQKGPVRGIS KLQEEERER+ +VP+ SA+ + VD +T D++ +LG+ ++ V Q Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAGYTTHLMKRIQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGLKLPLSVINVSAQ 127
BLAST of CF832018 vs. ExPASy Swiss-Prot
Match: RS17A_YEAST (40S ribosomal protein S17-A OS=Saccharomyces cerevisiae GN=RPS17A PE=1 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 8.318e-35 Identity = 73/127 (57.48%), Postives = 97/127 (76.38%), Query Frame = -3 Query: 263 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDE----IKVDKETLDMLAALGMSDISGLVEVEPQ 631 MGRVRTKTVK++S+ +IERYY ++TLDF TNK++ +E+A I SKRLRNKIAG++THLMKRIQKGPVRGIS KLQEEERER+ +VP+ SA+ + VD +T D++ +LG+ ++ V Q Sbjct: 1 MGRVRTKTVKRASKALIERYYPKLTLDFQTNKRLCDEIATIQSKRLRNKIAGYTTHLMKRIQKGPVRGISFKLQEEERERKDQYVPEVSALDLSRSNGVLNVDNQTSDLVKSLGLKLPLSVINVSAQ 127
BLAST of CF832018 vs. ExPASy Swiss-Prot
Match: RS17_DICDI (40S ribosomal protein S17 OS=Dictyostelium discoideum GN=rps17 PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 1.853e-34 Identity = 69/106 (65.09%), Postives = 91/106 (85.85%), Query Frame = -3 Query: 314 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDML 631 MGRVRTKT+K++S+ +IE++Y R+T DF TNK+ +++A IPSKRLRNKIAGF THLM+RI GPVRGIS KLQEEERE+R ++VP ESAIKT+E+K+D++ +ML Sbjct: 1 MGRVRTKTIKRASKLLIEKHYPRLTNDFDTNKRTCDKLAKIPSKRLRNKIAGFCTHLMRRIANGPVRGISYKLQEEEREKRDNYVPQESAIKTNEVKIDRDVEEML 106
BLAST of CF832018 vs. ExPASy Swiss-Prot
Match: RS17_CAEEL (40S ribosomal protein S17 OS=Caenorhabditis elegans GN=rps-17 PE=2 SV=2) HSP 1 Score: 145.206 bits (365), Expect = 3.161e-34 Identity = 73/115 (63.48%), Postives = 93/115 (80.87%), Query Frame = -3 Query: 296 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDE---IKVDKETLDMLAALGMS 631 M RVRTKTVKK+SR +IE+YY+RMT DFH NK++ +EVAII SK LRNKIAG+ THLM+RI++GPVRGIS+KLQEEERERR +++P+ S + + IKVD +T DML A G + Sbjct: 1 MSRVRTKTVKKASRVLIEKYYTRMTNDFHNNKRVCDEVAIIGSKPLRNKIAGYITHLMRRIERGPVRGISIKLQEEERERRDNYMPEISTVDPSQLTSIKVDTDTSDMLKAAGFN 115
BLAST of CF832018 vs. ExPASy Swiss-Prot
Match: RS17_ENCCU (40S ribosomal protein S17 OS=Encephalitozoon cuniculi GN=RPS17 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.899e-19 Identity = 44/110 (40.00%), Postives = 73/110 (66.36%), Query Frame = -3 Query: 302 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQKGPVRGISLKLQEEERERRMDFVPDESAIKTDEIKVDKETLDMLAALG 631 MG VR K VK+++R + E+Y+ R+ F N ++++VA++ SK+L+N+IAG+ T L K+I KG + +K EEERER+ + +P ES + D ++VD T++M+ G Sbjct: 1 MGCVRNKIVKRAARTIAEKYFQRLDSTFDHNLLVVQDVAVVQSKKLKNEIAGYLTSLYKKILKGTYNKVYIKSHEEERERKENVIPKESMLDVDCVEVDDVTMEMIKRYG 110
BLAST of CF832018 vs. ExPASy Swiss-Prot
Match: RS17E_METJA (30S ribosomal protein S17e OS=Methanocaldococcus jannaschii GN=rps17e PE=3 SV=2) HSP 1 Score: 71.2478 bits (173), Expect = 5.801e-12 Identity = 31/62 (50.00%), Postives = 48/62 (77.42%), Query Frame = -3 Query: 446 MGRVRTKTVKKSSRQVIERYYSRMTLDFHTNKKILEEVAIIPSKRLRNKIAGFSTHLMKRIQ 631 MGR+R +K+++ ++I++Y T DF TNK++LEEVA I +KRLRN+IAG+ TH M+++Q Sbjct: 1 MGRIRQTLIKRTAMELIKKYRDLFTTDFETNKRVLEEVAQISTKRLRNRIAGYITHKMRQLQ 62 The following BLAST results are available for this feature:
BLAST of CF832018 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832018 ID=CF832018; Name=CF832018; organism=Citrus sinensis; type=EST; length=699bpback to top |