CF832021

Overview
NameCF832021
Unique NameCF832021
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length716
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6288 contig Csv1_Contig6288:132..847. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832021 vs. ExPASy Swiss-Prot
Match: PDIA1_MACFU (Protein disulfide-isomerase OS=Macaca fuscata fuscata GN=P4HB PE=2 SV=1)

HSP 1 Score: 79.7221 bits (195), Expect = 1.692e-14
Identity = 64/240 (26.67%), Postives = 114/240 (47.50%), Query Frame = 3
Query:    3 EADRIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVRLLKPFDELFVDFK-DFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQGI-SFLLGDLEASQGAFQYFGLQESQVPLI-VIQTNDGQKYLKPNLD---ADQIAPWVKEYKEGKVPP 704
            EAD IV +LKK++GPA+  +     A S +   +V +IG F +   +  + +   AE +  D  FG T N+ +  + +    G V  L K FDE   +F+ +   + L  F++ + +P+V  F       P +  F        +LF+  S    +   S ++  AE +KG+ +  F+  D   +Q   ++FGL++ + P + +I   +     KP  D   A++I  +   + EGK+ P
Sbjct:  123 EADDIVNWLKKRTGPAATTLPDGAAAESLVESSEVAVIGFFKDVESDSAKQFLQAAEAI-DDIPFGITSNSDVFSKYQLDKDGVV--LFKKFDEGRNNFEGEVTKENLLDFIKYNQLPLVIEFTE--QTAPKI--FGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESDELTAERITEFCHRFLEGKIKP 355          
BLAST of CF832021 vs. ExPASy Swiss-Prot
Match: PDIA1_PONAB (Protein disulfide-isomerase OS=Pongo abelii GN=P4HB PE=2 SV=1)

HSP 1 Score: 78.9518 bits (193), Expect = 2.887e-14
Identity = 63/240 (26.25%), Postives = 114/240 (47.50%), Query Frame = 3
Query:    3 EADRIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVRLLKPFDELFVDFK-DFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQGI-SFLLGDLEASQGAFQYFGLQESQVPLI-VIQTNDGQKYLKP---NLDADQIAPWVKEYKEGKVPP 704
            EAD IV +LKK++GPA+  +     A S +   +V ++G F +   +  + +   AE +  D  FG T N+ +  + +    G V  L K FDE   +F+ +   + L  F++ + +P+V  F       P +  F        +LF+  S    +   S ++  AE +KG+ +  F+  D   +Q   ++FGL++ + P + +I   +     KP    L A++I  +   + EGK+ P
Sbjct:  121 EADDIVNWLKKRTGPAATILPDGAAAESLVESSEVAVVGFFKDVESDSAKQFLQAAEAI-DDIPFGITSNSDVFSKYQLDKDGVV--LFKKFDEGRNNFEGEVTKENLLDFIKHNQLPLVIEFTE--QTAPKI--FGGEIKTHILLFLPKSVSDYDGKLSNFKTAAESFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESEELTAERITEFCHRFLEGKIKP 353          
BLAST of CF832021 vs. ExPASy Swiss-Prot
Match: PDIA3_MOUSE (Protein disulfide-isomerase A3 OS=Mus musculus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 60/254 (23.62%), Postives = 122/254 (48.03%), Query Frame = 3
Query:    6 ADRIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLL----PRGESSVTGPVVRLLKPFDELFVDFKDFKVDA--LEKFVEESSI---PIVTVFNSD-ANNHPFVIKFFNSPNAKAMLFMNFSSEGTEPIQSKYREVAEQY--KGQGISFLLGDLEASQGAFQYFGLQES--QVPLIVIQTNDGQKYLKP---NLDADQIAPWVKEYKEGKVPPFRKS 716
            AD IV +LKKQ+GPAS  +++ E+   FI +K   ++G F +   +    +   A  LR +Y F HT    L+      GE       + L   F++  V + + K+ +  ++KF+++S     P +T  N D       +  +++    K       +++G+   +++   VA+++   G  ++F +   +        FGL+ +  +VP++ I+T  G+K++     + D   +  +++EY +G +  + KS
Sbjct:  121 ADGIVSHLKKQAGPASVPLRTEEEFKKFISDKDASVVGFFRDLFSDGHSEFLKAASNLRDNYRFAHTNIESLVKEYDDNGEGITIFRPLHLANKFEDKTVAYTEKKMTSGKIKKFIQDSIFGLCPHMTEDNKDLIQGKDLLTAYYDVDYEK-------NAKGSNYWRNRVMMVAKKFLDAGHKLNFAVASRKTFSHELSDFGLESTTGEVPVVAIRTAKGEKFVMQEEFSRDGKALEQFLQEYFDGNLKRYLKS 367          
BLAST of CF832021 vs. ExPASy Swiss-Prot
Match: PDIA1_RABIT (Protein disulfide-isomerase OS=Oryctolagus cuniculus GN=P4HB PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 64/240 (26.67%), Postives = 117/240 (48.75%), Query Frame = 3
Query:    3 EADRIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVRLLKPFDELFVDFK-DFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQGI-SFLLGDLEASQGAFQYFGLQESQVPLI-VIQTNDGQKYLKPNLD---ADQIAPWVKEYKEGKVPP 704
            EAD IV +LKK++GPA+  +  +  A S +   +V +IG F +   +  + +  LA +   D  FG T ++ +  R +    G V  L K FDE   +F+ +   + L  F++ + +P+V  F       P +  F        +LF+  S+   +   S +++ AE +KG+ +  F+  D   +Q   ++FGL++ + P + +I   +     KP  D   A+ I  + + + EGK+ P
Sbjct:  122 EADDIVNWLKKRTGPAATTLADSAAAESLVESSEVAVIGFFKDVESDAAKQF-LLAAEATDDIPFGLTASSDVFSRYQVHQDGVV--LFKKFDEGRNNFEGEVTKEKLLDFIKHNQLPLVIEFTE--QTAPKI--FGGEIKTHILLFLPRSAADHDGKLSGFKQAAEGFKGKILFIFIDSDHADNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESDELTAEGITEFCQRFLEGKIKP 354          
BLAST of CF832021 vs. ExPASy Swiss-Prot
Match: PDIA1_CRIGR (Protein disulfide-isomerase OS=Cricetulus griseus GN=P4HB PE=2 SV=1)

HSP 1 Score: 78.5666 bits (192), Expect = 3.770e-14
Identity = 63/240 (26.25%), Postives = 114/240 (47.50%), Query Frame = 3
Query:    3 EADRIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVRLLKPFDELFVDFK-DFKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQGI-SFLLGDLEASQGAFQYFGLQESQVPLI-VIQTNDGQKYLKPNLD---ADQIAPWVKEYKEGKVPP 704
            EAD IV +LKK++GPA+  +     A + I   +V +IG F +   +  + +   AE +  D  FG T N+ +  + +    G V  L K FDE   +F+ +   + L  F++ + +P+V  F       P +  F        +LF+  S    +     +++ AE +KG+ +  F+  D   +Q   ++FGL++ + P + +I   +     KP  D   A++I  +   + EGK+ P
Sbjct:  123 EADDIVNWLKKRTGPAATTLSDTAAAETLIDSSEVAVIGFFKDVESDSAKQFLLAAEAV-DDIPFGITSNSGVFSKYQLDKDGVV--LFKKFDEGRNNFEGEVTKEKLLDFIKHNQLPLVIEFTE--QTAPKI--FGGEIKTHILLFLPKSVSDYDGKLGNFKKAAEGFKGKILFIFIDSDHTDNQRILEFFGLKKEECPAVRLITLEEEMTKYKPESDELTAEKITEFCHRFLEGKIKP 355          
BLAST of CF832021 vs. ExPASy Swiss-Prot
Match: PDIA3_RAT (Protein disulfide-isomerase A3 OS=Rattus norvegicus GN=Pdia3 PE=1 SV=2)

HSP 1 Score: 77.7962 bits (190), Expect = 6.431e-14
Identity = 59/254 (23.23%), Postives = 121/254 (47.64%), Query Frame = 3
Query:    6 ADRIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLL----PRGESSVTGPVVRLLKPFDELFVDFKDFKVDA--LEKFVEESSI---PIVTVFNSD-ANNHPFVIKFFNSPNAKAMLFMNFSSEGTEPIQSKYREVAEQY--KGQGISFLLGDLEASQGAFQYFGLQES--QVPLIVIQTNDGQKYLKP---NLDADQIAPWVKEYKEGKVPPFRKS 716
            AD IV +LKKQ+GPAS  +++ ++   FI +K   ++G F +   +    +   A  LR +Y F HT    L+      GE       + L   F++  V + + K+ +  ++KF++ES     P +T  N D       +  +++    K       +++G+   +++   VA+ +   G  ++F +   +        FGL+ +  ++P++ I+T  G+K++     + D   +  +++EY +G +  + KS
Sbjct:  121 ADGIVSHLKKQAGPASVPLRTEDEFKKFISDKDASVVGFFRDLFSDGHSEFLKAASNLRDNYRFAHTNVESLVKEYDDNGEGITIFRPLHLANKFEDKIVAYTEKKMTSGKIKKFIQESIFGLCPHMTEDNKDLIQGKDLLTAYYDVDYEK-------NTKGSNYWRNRVMMVAKTFLDAGHKLNFAVASRKTFSHELSDFGLESTTGEIPVVAIRTAKGEKFVMQEEFSRDGKALERFLQEYFDGNLKRYLKS 367          
BLAST of CF832021 vs. ExPASy Swiss-Prot
Match: PDIA2_PONAB (Protein disulfide-isomerase A2 OS=Pongo abelii GN=PDIA2 PE=2 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 3.192e-13
Identity = 61/217 (28.11%), Postives = 107/217 (49.31%), Query Frame = 3
Query:    3 EADRIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVRLLKPFDELFVDF---KDFKVDA--LEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQGISFLLGDLEA-SQGAFQYFGLQESQVP-LIVIQTNDGQKY 632
            EA+ I E+L+++ GP++  ++    A + I  + +V+IG F +   E+   + ALA+    D  FG T   +L    +  +T   V L K FDE   DF   ++  +D   L +F+   S+ +VT FNS  +   F  +  N      +LF+N +      +   + E A  ++GQ + F++ D+ A ++   QYFGL+    P L ++     +KY
Sbjct:  139 EAEGIAEWLRRRVGPSAMRLEDEAAAQALIDGRDLVVIGFFQDLHDEDVATFLALAQD-ALDMTFGLTDRPQLFQ--QFGLTKDTVVLFKKFDEGRADFPVDEELGLDLGDLSRFLVTHSMRLVTEFNSQTSAKIFAARILN----HLLLFVNQTLAAHRELLVGFGEAAPHFRGQ-VLFVVVDVAADNEHVLQYFGLKAEAAPTLRLVNLETTKKY 347          
BLAST of CF832021 vs. ExPASy Swiss-Prot
Match: PDI2_CAEEL (Protein disulfide-isomerase 2 OS=Caenorhabditis elegans GN=pdi-2 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13
Identity = 54/239 (22.59%), Postives = 120/239 (50.21%), Query Frame = 3
Query:    9 DRIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFG-HTQNAKLLPRGESSVTGPVVRLLKPFDELFVDFKD-FKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQGI-SFLLGDLEASQGAFQYFGLQESQVPLI-VIQTNDGQKYLKPNLD---ADQIAPWVKEYKEGKVPP 704
            D I+ +LKK++GP +  +  A+          VV+IG F + + ++ + +  +A  +  D  FG  T++A    + E  + G  + L K FD+  V F +    D L+ +++ + + +V+ F  +  +    + F     +  +LF++  S     ++ +++  A+Q+KG+ +  ++  D+E +    ++FGL++ ++P I +I   +     KP+ +    + I+ + + Y +G V P
Sbjct:  119 DSIIAWLKKKTGPVAKPLADADAVKELQESADVVVIGYFKDTTSDDAKTFLEVAAGI-DDVPFGISTEDA---VKSEIELKGEGIVLFKKFDDGRVAFDEKLTQDGLKTWIQANRLALVSEFTQETAS----VIFGGEIKSHNLLFVSKESSEFAKLEQEFKNAAKQFKGKVLFVYINTDVEENARIMEFFGLKKDELPAIRLISLEEDMTKFKPDFEEITTENISKFTQNYLDGSVKP 349          
BLAST of CF832021 vs. ExPASy Swiss-Prot
Match: PDIA4_HUMAN (Protein disulfide-isomerase A4 OS=Homo sapiens GN=PDIA4 PE=1 SV=2)

HSP 1 Score: 72.0182 bits (175), Expect = 3.529e-12
Identity = 71/253 (28.06%), Postives = 124/253 (49.01%), Query Frame = 3
Query:   15 IVEYLKKQSGPASAEIKSAEDASSFIGE-KKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVRLLKPFDELF------VDFKDFKVD-ALEKFVEESSIPIV--TVFNSDANNH---PFVIKFFNSPNAKAMLFMNFSSE---GTEPIQSKYREVAEQYKGQGISFLLGDLEASQGAFQYFGLQESQVPL-IVIQTNDGQKY-LKP-NLDADQIAPWVKEYKEGKVPPFRKS 716
            IV+Y+ +QSGP S EI + +    F+ +   V+IIGVF   S   ++ Y   A  LR DY+F HT + ++    + S    VV   + F   +      +D +    D A++ FV + ++P+V     ++DA  +   P V+ +++         ++FS +    T+  +SK  EVA+ +     +F + D E   G  +  GL ES   +   I    G+K+ ++P   D+D +  +V  +K+GK+ P  KS
Sbjct:  275 IVDYMIEQSGPPSKEILTLKQVQEFLKDGDDVIIIGVFKGESDPAYQQYQDAANNLREDYKFHHTFSTEIAKFLKVSQGQLVVMQPEKFQSKYEPRSHMMDVQGSTQDSAIKDFVLKYALPLVGHRKVSNDAKRYTRRPLVVVYYS---------VDFSFDYRAATQFWRSKVLEVAKDF--PEYTFAIADEEDYAGEVKDLGLSESGEDVNAAILDESGKKFAMEPEEFDSDTLREFVTAFKKGKLKPVIKS 516          
BLAST of CF832021 vs. ExPASy Swiss-Prot
Match: PDI_HUMIN (Protein disulfide-isomerase OS=Humicola insolens PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.901e-11
Identity = 64/243 (26.34%), Postives = 110/243 (45.27%), Query Frame = 3
Query:    3 EADRIVEYLKKQSGPASAEIKSAEDASSFIGEKKVVIIGVFPNFSGEEFENYTALAEKLRSDYEFGHTQNAKLLPRGESSVTGPVVRLLKPFDELFVDFKD-FKVDALEKFVEESSIPIVTVFNSDANNHPFVIKFFNSPNAKAMLFMNFSSEGTEPIQSKYREVAEQYKGQGISFLLGDLEASQGAFQYFGLQESQVPLIVIQ-TNDGQKY---LKPNLDADQIAPWVKEYKEGKVPPFRKS 716
            +A  I  Y+ KQS PA +E+ + ++   F    K V++           E +T +AEKLR +Y FG + +A L       V  P + L K FDE    F + F+V+A+EKF +  + P++     +  +      + ++    A +F   + E  E +  K + +AE  +G  I+F   D +A         L+  + P   IQ     QK+    +  +  + I  +V ++  GK+ P  KS
Sbjct:  114 KAAAITSYMIKQSLPAVSEV-TKDNLEEFKKADKAVLVAYVDASDKASSEVFTQVAEKLRDNYPFGSSSDAALAE--AEGVKAPAIVLYKDFDEGKAVFSEKFEVEAIEKFAKTGATPLIGEIGPETYS-----DYMSAGIPLAYIFAETAEERKE-LSDKLKPIAEAQRGV-INFGTIDAKAFGAHAGNLNLKTDKFPAFAIQEVAKNQKFPFDQEKEITFEAIKAFVDDFVAGKIEPSIKS 346          
The following BLAST results are available for this feature:
BLAST of CF832021 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 31
Match NameE-valueIdentityDescription
PDIA1_MACFU1.692e-1426.67Protein disulfide-isomerase OS=Macaca fuscata fusc... [more]
PDIA1_PONAB2.887e-1426.25Protein disulfide-isomerase OS=Pongo abelii GN=P4H... [more]
PDIA3_MOUSE3.770e-1423.62Protein disulfide-isomerase A3 OS=Mus musculus GN=... [more]
PDIA1_RABIT3.770e-1426.67Protein disulfide-isomerase OS=Oryctolagus cunicul... [more]
PDIA1_CRIGR3.770e-1426.25Protein disulfide-isomerase OS=Cricetulus griseus ... [more]
PDIA3_RAT6.431e-1423.23Protein disulfide-isomerase A3 OS=Rattus norvegicu... [more]
PDIA2_PONAB3.192e-1328.11Protein disulfide-isomerase A2 OS=Pongo abelii GN=... [more]
PDI2_CAEEL7.110e-1322.59Protein disulfide-isomerase 2 OS=Caenorhabditis el... [more]
PDIA4_HUMAN3.529e-1228.06Protein disulfide-isomerase A4 OS=Homo sapiens GN=... [more]
PDI_HUMIN3.901e-1126.34Protein disulfide-isomerase OS=Humicola insolens P... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01C23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832021 ID=CF832021; Name=CF832021; organism=Citrus sinensis; type=EST; length=716bp
GCGAGGCCGATCGTATCGTTGAATATTTGAAGAAACAAAGTGGTCCTGCT
TCTGCTGAAATTAAGTCGGCGGAAGATGCTAGTAGTTTCATCGGTGAGAA
GAAAGTGGTCATTATTGGTGTGTTTCCAAATTTCTCTGGAGAGGAGTTTG
AGAACTACACGGCTCTTGCTGAGAAATTGCGTTCTGATTATGAGTTTGGT
CACACTCAAAATGCCAAGCTCCTTCCACGTGGGGAGTCATCAGTGACTGG
GCCAGTAGTTAGATTGCTCAAGCCTTTTGATGAACTCTTTGTTGACTTTA
AGGACTTTAAAGTGGATGCTCTTGAGAAGTTTGTTGAAGAATCAAGCATT
CCTATAGTGACTGTCTTTAACAGTGATGCAAACAATCACCCATTTGTCAT
CAAATTCTTTAACAGTCCCAATGCAAAGGCTATGTTGTTTATGAACTTCA
GCAGCGAAGGAACTGAACCTATTCAATCAAAGTATCGTGAAGTTGCTGAA
CAATACAAAGGACAGGGCATTAGTTTTCTTTTGGGAGACCTTGAGGCTAG
TCAAGGTGCCTTCCAGTACTTTGGGCTACAAGAGAGCCAAGTACCTCTCA
TCGTCATTCAGACTAATGATGGGCAGAAGTATTTGAAGCCGAACTTGGAT
GCCGATCAGATTGCACCTTGGGTGAAGGAATACAAGGAAGGCAAGGTTCC
CCCATTCAGAAAGTCT
back to top