CF832022

Overview
NameCF832022
Unique NameCF832022
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length837
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig6288 contig Csv1_Contig6288:764..1600. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: BS2_TRYBB (Bloodstream-specific protein 2 OS=Trypanosoma brucei brucei GN=BS2 PE=3 SV=1)

HSP 1 Score: 95.9005 bits (237), Expect = 3.005e-19
Identity = 48/158 (30.38%), Postives = 82/158 (51.90%), Query Frame = -1
Query:  355 DQIAPWVKEYKEGKVPPFRKFXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENN----RDKAAPKETVKEESGKDE 816
            + +  ++ E+  G+V P  K               +          SGK++L+ F+APWCGHCK  AP  D++A  + +  D+++A+ DATAN +   TF V  +PTVFF    GK V +EG+R+ E++ +F+  +    +    P    +E+  ++E
Sbjct:  319 ESLEKFILEFAAGRVEPTIKSLPVPEVETVDGKTTIVAKTMQKHLTSGKDMLILFFAPWCGHCKNFAPTFDKIAKEF-DATDLIVAELDATANYVNSSTFTVTAFPTVFFVPNGGKPVVFEGERSFENVYEFVRKHVTTFKVSEKPANVTEEKKSEEE 475          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDIA1_RAT (Protein disulfide-isomerase OS=Rattus norvegicus GN=P4hb PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 6.695e-19
Identity = 51/147 (34.69%), Postives = 85/147 (57.82%), Query Frame = -1
Query:  394 LNADQIAPWVKEYKEGKVPP-FRKFXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 825
            L A++I  +   + EGK+ P                   V  + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAEKITQFCHHFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDIA1_MACFU (Protein disulfide-isomerase OS=Macaca fuscata fuscata GN=P4HB PE=2 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.695e-19
Identity = 51/147 (34.69%), Postives = 84/147 (57.14%), Query Frame = -1
Query:  394 LNADQIAPWVKEYKEGKVPP-FRKFXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 825
            L A++I  +   + EGK+ P                   V  + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF ++  +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAERITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDENKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAIKVHSFPTLKFFPASVDRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDIA1_BOVIN (Protein disulfide-isomerase OS=Bos taurus GN=P4HB PE=1 SV=1)

HSP 1 Score: 94.7449 bits (234), Expect = 6.695e-19
Identity = 51/147 (34.69%), Postives = 85/147 (57.82%), Query Frame = -1
Query:  394 LNADQIAPWVKEYKEGKVPP-FRKFXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 825
            L A++I  +   + EGK+ P                   V  + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  ++VIAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAEKITEFCHRFLEGKIKPHLMSQELPDDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIVIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: GSBP_CHICK (Dolichyl-diphosphooligosaccharide--protein glycotransferase OS=Gallus gallus PE=2 SV=2)

HSP 1 Score: 94.3597 bits (233), Expect = 8.744e-19
Identity = 52/168 (30.95%), Postives = 91/168 (54.17%), Query Frame = -1
Query:  355 LNADQIAPWVKEYKEGKVPP--FRKFXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGK--TVPYEGDRTKEDIVDFIEN-------NRDKAAPKETVKEESGKDE 825
            L A+++  +   + EGK+ P                    V  + +++ F+  KNV +EFYAPWCGHCK+LAP+ D +  +Y++D ++VIAK ++TAN++  +  +V  +PT+ F  AS +   + Y G+RT +    F+E+       N D    +E ++ +  +DE
Sbjct:  334 LTAEKLTQFCHHFLEGKIKPHLMSNEPLPEDWDKQPVKVLVGKNYEEVAFDEKKNVFIEFYAPWCGHCKQLAPMWDRLGEAYKDDENIVIAKMESTANEV--EAIKVHSFPTLKFFPASAERTVIDYNGERTLDGYKKFLESGGQDGYGNNDDDDLEEALESDMEEDE 499          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDIA1_MOUSE (Protein disulfide-isomerase OS=Mus musculus GN=P4hb PE=1 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18
Identity = 50/147 (34.01%), Postives = 85/147 (57.82%), Query Frame = -1
Query:  394 LNADQIAPWVKEYKEGKVPP-FRKFXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 825
            L A++I  +   + EGK+ P                   V  + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  +++IAK D+TAN++  +  +V  +PT+ FF +++ +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAEKITEFCHRFLEGKIKPHLMSQEVPEDWDKQPVKVLVGANFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEV--EAVKVHSFPTLKFFPASADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDIA1_CRIGR (Protein disulfide-isomerase OS=Cricetulus griseus GN=P4HB PE=2 SV=1)

HSP 1 Score: 93.9745 bits (232), Expect = 1.142e-18
Identity = 50/147 (34.01%), Postives = 84/147 (57.14%), Query Frame = -1
Query:  394 LNADQIAPWVKEYKEGKVPP-FRKFXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTV-PYEGDRTKEDIVDFIENNRDKAA 825
            L A++I  +   + EGK+ P                   V  + +++ F+  KNV +EFYAPWCGHCK+LAPI D++  +Y++  +++IAK D+TAN++  +  +V  +PT+ FF + + +TV  Y G+RT +    F+E+     A
Sbjct:  336 LTAEKITEFCHRFLEGKIKPHLMSQELPEDWDKQPVKVLVGKNFEEVAFDEKKNVFVEFYAPWCGHCKQLAPIWDKLGETYKDHENIIIAKMDSTANEV--EAVKVHSFPTLKFFPATADRTVIDYNGERTLDGFKKFLESGGQDGA 480          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDI1_CAEEL (Protein disulfide-isomerase 1 OS=Caenorhabditis elegans GN=pdi-1 PE=3 SV=1)

HSP 1 Score: 90.1225 bits (222), Expect = 1.649e-17
Identity = 42/114 (36.84%), Postives = 68/114 (59.65%), Query Frame = -1
Query:  370 ADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKEE 708
            A +  ++  +  K V ++FYAPWCGHCK+L P+ DE+A  Y+++ +VVIAK DAT N++     +V  +PT+  + + S   V Y+GDR  E   +F+      A+  ET  ++
Sbjct:  370 ASNFNEIALDETKTVFVKFYAPWCGHCKQLVPVWDELAEKYESNPNVVIAKLDATLNELA--DVKVNSFPTLKLWPAGSSTPVDYDGDRNLEKFEEFVNKYAGSASESETASQD 481          

HSP 2 Score: 83.1889 bits (204), Expect = 2.016e-15
Identity = 45/104 (43.27%), Postives = 60/104 (57.69%), Query Frame = -1
Query:  373 NSGKNVLLEFYAPWCGHCKKLAPILDEVA-VSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVPYEGDRTKEDIVDFIENNRDKAAPKETVKE 681
            N  + VL++FYAPWC HCK LAP  DE A +  +  +D+ +AK DAT N      FEV+GYPT+ +   SGK   Y G R    IVD++   + K+ P  T  E
Sbjct:   38 NGNEFVLVKFYAPWCVHCKSLAPKYDEAADLLKEEGSDIKLAKVDATENQALASKFEVRGYPTILY-FKSGKPTKYTGGRATAQIVDWV---KKKSGPTVTTVE 137          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: ERP60_SCHMA (Probable protein disulfide-isomerase ER-60 OS=Schistosoma mansoni PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 3.674e-17
Identity = 45/135 (33.33%), Postives = 77/135 (57.04%), Query Frame = -1
Query:  418 DQIAPWVKEYKEGKVPPFRKFXXXXXXXXXXXXXXVADSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTVFFRSASGKTVP--YEGDRTKEDIVDFI 816
            D  + ++ ++++G + P  K               VA +  ++V N  K+V++ F+A WCGHCK L P  +E A   +N+ ++V+A  DATAND+P   ++V+G+PT++F     K+ P  YEG R   DI+ ++
Sbjct:  329 DAFSDFLNKFEDGLLTPHVKSEPLPTDDSSAVKKLVALNFDEIVNNEEKDVMVVFHAGWCGHCKNLMPKYEEAASKVKNEPNLVLAAMDATANDVP-SPYQVRGFPTIYFVPKGKKSSPVSYEGGRDTNDIIKYL 462          
BLAST of CF832022 vs. ExPASy Swiss-Prot
Match: PDIA6_ARATH (Probable protein disulfide-isomerase A6 OS=Arabidopsis thaliana GN=At2g47470 PE=1 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.798e-17
Identity = 42/97 (43.30%), Postives = 61/97 (62.89%), Query Frame = -1
Query:  418 DSLQDMVFNSGKNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 705
            D+  ++V +  K+VL+EFYAPWCGHCK LAP  ++VA  ++ +  VVIA  DA A+   G+ + V G+PT+ FF   +     Y+G R  +D V FI
Sbjct:  149 DNFDEIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYGVSGFPTLKFFPKDNKAGHDYDGGRDLDDFVSFI 245          

HSP 2 Score: 73.9442 bits (180), Expect = 1.223e-12
Identity = 35/86 (40.70%), Postives = 50/86 (58.14%), Query Frame = -1
Query:  418 KNVLLEFYAPWCGHCKKLAPILDEVAVSYQNDADVVIAKFDATANDIPGDTFEVQGYPTV-FFRSASGKTVPYEGDRTKEDIVDFI 672
            K  L+EFYAPWCGHCKKLAP  +++  S++    V+IAK D          + V GYPT+ +F   S +   YEG R  E + +++
Sbjct:   41 KGALVEFYAPWCGHCKKLAPEYEKLGASFKKAKSVLIAKVDCDEQKSVCTKYGVSGYPTIQWFPKGSLEPQKYEGPRNAEALAEYV 126          
The following BLAST results are available for this feature:
BLAST of CF832022 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 70
Match NameE-valueIdentityDescription
BS2_TRYBB3.005e-1930.38Bloodstream-specific protein 2 OS=Trypanosoma bruc... [more]
PDIA1_RAT6.695e-1934.69Protein disulfide-isomerase OS=Rattus norvegicus G... [more]
PDIA1_MACFU6.695e-1934.69Protein disulfide-isomerase OS=Macaca fuscata fusc... [more]
PDIA1_BOVIN6.695e-1934.69Protein disulfide-isomerase OS=Bos taurus GN=P4HB ... [more]
GSBP_CHICK8.744e-1930.95Dolichyl-diphosphooligosaccharide--protein glycotr... [more]
PDIA1_MOUSE1.142e-1834.01Protein disulfide-isomerase OS=Mus musculus GN=P4h... [more]
PDIA1_CRIGR1.142e-1834.01Protein disulfide-isomerase OS=Cricetulus griseus ... [more]
PDI1_CAEEL1.649e-1736.84Protein disulfide-isomerase 1 OS=Caenorhabditis el... [more]
ERP60_SCHMA3.674e-1733.33Probable protein disulfide-isomerase ER-60 OS=Schi... [more]
PDIA6_ARATH4.798e-1743.30Probable protein disulfide-isomerase A6 OS=Arabido... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01C24_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01C24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832022 ID=CF832022; Name=CF832022; organism=Citrus sinensis; type=EST; length=837bp
CGTAATAAGCAAAATCCGAAATAATTACCCTATAAAATTAAAATTATCCA
TTACGGATTTAACACGCAGTTTGTTACTCCTAGGCCGAAAATACTAATAT
CACAACTATGCGAATACCAAAAAGTACTGCAGCTACAAATGCCTCCAATG
CCTCCCCATTTTATTCACGGGAACAGAACAGATCTGTAAAGGGAAATGGC
CTCAGAAAAAGCTATAAGGGGGGATATAGGACAAGGGGGAGGAGAACATC
AGGCATTGTTTTGTCGACACTGATAGTTTTGGTATAACATCCGCCAAACA
CGCGCCAACCGACTATGTGCACGGCTCTCTAAACATACCCATTCCTTCTT
AGAGCTCATCTTTTCCAGATTCCTCTTTTACAGTTTCCTTGGGGGCAGCT
TTGTCCCTGTTATTTTCAATGAAGTCAACAATATCTTCTTTGGTCCTATC
CCCCTCATAGGGCACTGTCTTTCCACTAGCAGATCGGAAGAACACGGTTG
GGTAACCTTGGACTTCAAAGGTGTCACCAGGAATATCATTTGCGGTTGCA
TCAAATTTTGCAATAACAACATCAGCATCATTTTGATATGAGACAGCAAC
TTCATCCAAGATTGGAGCCAACTTTTTGCAGTGTCCACACCAAGGAGCGT
AAAACTCGAGCAAAACATTTTTTCCAGAGTTGAAAACCATGTCCTGAAGG
CTGTCAGCAACAACCACTTTCACAGGCTCGTTGTTCTCTTCAGGGATAGG
CTCAAACTTTCTGAATGGGGGAACCTTGCCTTCCTTGTATTCCTTCACCC
AAGGTGCAATCTGATCGGCATTCAAGTTCGGCTTCAA
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