CF832028
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RL7_CANGA (60S ribosomal protein L7 OS=Candida glabrata GN=RPL7 PE=3 SV=1) HSP 1 Score: 204.142 bits (518), Expect = 6.813e-52 Identity = 93/170 (54.71%), Postives = 128/170 (75.29%), Query Frame = -1 Query: 266 FYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKR--NHYVEGGDAGNREDYINELIRRMN 769 +YV + KL+F++RI+GIN + PK +K+LQLLRL QI +G F+KV KAT +L +EPYV YGYP+ +V++L+YKRG+GK+NKQRIAL+DN I+E LG+ GI+ ++D IHEI+TVGPHFK+ANNFLWPF R H+++GG GNRE +IN+L++ MN Sbjct: 75 YYVEAQPKLVFVVRIKGINKIPPKPRKVLQLLRLTQINSGTFVKVTKATSELLKLIEPYVAYGYPSYSTVRQLVYKRGHGKINKQRIALSDNAIVEANLGKFGILSIDDLIHEIVTVGPHFKQANNFLWPFKLSNPSGGWGVPRKFKHFIQGGAFGNREQFINKLVKAMN 244
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RL7B_SCHPO (60S ribosomal protein L7-B OS=Schizosaccharomyces pombe GN=rpl7b PE=2 SV=1) HSP 1 Score: 203.756 bits (517), Expect = 8.898e-52 Identity = 98/168 (58.33%), Postives = 129/168 (76.79%), Query Frame = -1 Query: 269 FYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNREDYINELIRRM 769 ++V E KL+F++RIRGIN + PK +KI+QLLRL QI NG+F+K NKA ML VEPYVTYG PN K+V+ELIYKRG+GK+NKQRI L+DN IIE ALG++ I+ +ED IHEI TVGP+FK+A NFLWPF ++ H++EGGDAG R+++IN L+++M Sbjct: 82 YFVPHEPKLIFVVRIRGINNIPPKARKIMQLLRLLQINNGIFVKFNKAIKEMLQVVEPYVTYGIPNHKTVRELIYKRGFGKVNKQRIPLSDNAIIEAALGKYSILSVEDLIHEIYTVGPNFKQAANFLWPFKLSSPLGGWRERKFKHFIEGGDAGKRDEHINGLVQKM 249
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RL72_PARTE (60S ribosomal protein L7 2 OS=Paramecium tetraurelia GN=Rpl7-2 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.192e-50 Identity = 94/167 (56.29%), Postives = 123/167 (73.65%), Query Frame = -1 Query: 269 FYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRM 769 FYV EAKL+ ++RIRGIN ++P+ ++ L+LL+LRQ+ N F++VNKAT+ M+ +VEPYVTYGYP+ +K LIYKRGY K+N QRI +T+N +IEQ LG+ GI +ED IHEI TVGPHFKEAN FLW F KR ++ GD GNRED IN+L++RM Sbjct: 81 FYVPAEAKLILVVRIRGINTLNPQVRQTLRLLKLRQLHNAAFVRVNKATIEMIRKVEPYVTYGYPSRAVIKNLIYKRGYAKINGQRIPITNNNVIEQQLGKVGIHSVEDLIHEITTVGPHFKEANRFLWAFKLRGPRGGFIAKRRSFINQGDWGNREDLINDLVKRM 247
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RL71_PARTE (60S ribosomal protein L7 1 OS=Paramecium tetraurelia GN=Rpl7-1 PE=3 SV=1) HSP 1 Score: 199.134 bits (505), Expect = 2.192e-50 Identity = 94/167 (56.29%), Postives = 123/167 (73.65%), Query Frame = -1 Query: 269 FYVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRM 769 FYV EAKL+ ++RIRGIN ++P+ ++ L+LL+LRQ+ N F++VNKAT+ M+ +VEPYVTYGYP+ +K LIYKRGY K+N QRI +T+N +IEQ LG+ GI +ED IHEI TVGPHFKEAN FLW F KR ++ GD GNRED IN+L++RM Sbjct: 81 FYVPAEAKLILVVRIRGINTLNPQVRQTLRLLKLRQLHNAAFVRVNKATIEMIRKVEPYVTYGYPSRAVIKNLIYKRGYAKINGQRIPITNNNVIEQQLGKVGIHSVEDLIHEITTVGPHFKEANRFLWAFKLRGPRGGFIAKRKSFINQGDWGNREDLINDLVKRM 247
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RL7A_SCHPO (60S ribosomal protein L7-A OS=Schizosaccharomyces pombe GN=rpl7a PE=2 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.781e-43 Identity = 90/166 (54.22%), Postives = 115/166 (69.28%), Query Frame = -1 Query: 272 YVNPEAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKR-NHYVEGGDAGNREDYINELIRR 766 +V E KLLF+IRI G+ + PK +K+L+LLRL +I N VF++ NKA ML VEPYV YG PNL SV+ELIYKRG+GK+N QRIAL+DN +IE+ALG++ +I +ED IHEI VG HFKE FLWPF K+ H+ EG AG + INELI++ Sbjct: 82 FVPDETKLLFVIRIAGVKNMPPKIRKVLRLLRLSRINNAVFVRNNKAVAQMLRIVEPYVMYGIPNLHSVRELIYKRGFGKINGQRIALSDNALIEEALGKYDVISIEDIIHEIYNVGSHFKEVTKFLWPFTLTPVKHSLMEKKVKHFNEGRKAGYCGEEINELIKK 247
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RL71_ARATH (60S ribosomal protein L7-1 OS=Arabidopsis thaliana GN=RPL7A PE=2 SV=1) HSP 1 Score: 155.992 bits (393), Expect = 2.128e-37 Identity = 81/164 (49.39%), Postives = 108/164 (65.85%), Query Frame = -1 Query: 266 EAKLLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNH-YVEGGDAGNREDYINELIRRMN 754 ++ L+FIIRI+G N + PKTK+IL L+L+ +F GVF K + L +V+PYVTYGYPN KSVK+LIYK+G + + LTDN IIEQALG+H I+ +ED ++EI VG HF+E FL P ++ + EGGD GNRED IN+LI +MN Sbjct: 84 KSDLVFIIRIQGKNDMHPKTKRILNNLQLKSVFTGVFAKATDSLFQKLLKVQPYVTYGYPNDKSVKDLIYKKGCTIIEGNPVPLTDNNIIEQALGEHKILGIEDLVNEIARVGDHFREVMRFLGPLKLNKPVADVLHRKKQVFSEGGDTGNREDKINDLISKMN 247
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RL7L_MOUSE (60S ribosomal protein L7-like 1 OS=Mus musculus GN=Rpl7l1 PE=2 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.686e-34 Identity = 74/160 (46.25%), Postives = 102/160 (63.75%), Query Frame = -1 Query: 266 LLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 745 L F+IR+ I V K + L L+++F+GVF+KV ++ ML VEPYVT+G+PNLKSV+ELI KRG K+N + + LTDN +IE+ LG+ G+IC+ED IHEI G HF+E ++FL PF + E G G R D IN+LIR++N Sbjct: 87 LAFVIRMERIEGVSLLVKSTIMKLGLKKLFSGVFVKVTPQSVRMLRTVEPYVTWGFPNLKSVRELILKRGQAKINNKTVPLTDNTVIEEHLGRFGVICLEDLIHEIAFPGKHFQEVSSFLCPFLLSVARHATRNRVGFRKEMGSPGYRGDRINQLIRQLN 246
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RL7L_HUMAN (60S ribosomal protein L7-like 1 OS=Homo sapiens GN=RPL7L1 PE=1 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.093e-33 Identity = 75/160 (46.88%), Postives = 102/160 (63.75%), Query Frame = -1 Query: 266 LLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 745 L F++RI I+ V ++ + LRL++IF+GVF+KV L ML VEPYVT+G+PNLKSV+ELI KRG K+ + I LTDN +IE+ LG+ G+IC+ED IHEI G HF+E + FL PF + E G G R + IN+LIR++N Sbjct: 87 LAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLCPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RL7L_PONAB (60S ribosomal protein L7-like 1 OS=Pongo abelii GN=RPL7L1 PE=2 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.427e-33 Identity = 75/160 (46.88%), Postives = 102/160 (63.75%), Query Frame = -1 Query: 266 LLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 745 L F++RI I+ V ++ + LRL++IF+GVF+KV L ML VEPYVT+G+PNLKSV+ELI KRG K+ + I LTDN +IE+ LG+ G+IC+ED IHEI G HF+E + FL PF + E G G R + IN+LIR++N Sbjct: 87 LAFVVRIERIDGVSLLVQRTIARLRLKKIFSGVFVKVTPQNLKMLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKTIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKHFQEISWFLRPFHLSVARHATKNRVGFLKEMGTPGYRGERINQLIRQLN 246
BLAST of CF832028 vs. ExPASy Swiss-Prot
Match: RL7L_PIG (60S ribosomal protein L7-like 1 OS=Sus scrofa GN=RPL7L1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.996e-32 Identity = 71/160 (44.38%), Postives = 101/160 (63.12%), Query Frame = -1 Query: 266 LLFIIRIRGINAVDPKTKKILQLLRLRQIFNGVFLKVNKATLNMLHRVEPYVTYGYPNLKSVKELIYKRGYGKLNKQRIALTDNFIIEQALGQHGIICMEDFIHEILTVGPHFKEANNFLWPFXXXXXXXXXXXKRNHYVEGGDAGNREDYINELIRRMN 745 L F++RI I+ V ++ + LRL++IF+GVF++V T+ L VEPYVT+G+PNLKSV+ELI KRG K+ + I LTDN +IE+ LG+ G+IC+ED IHEI G +F+ + FL PF + E G G R + IN+LIR++N Sbjct: 88 LAFVVRIERISGVSSVVQRTIARLRLKKIFSGVFMQVTPQTIKTLRIVEPYVTWGFPNLKSVRELILKRGQAKVKNKIIPLTDNTVIEEHLGKFGVICLEDLIHEIAFPGKNFQAISGFLRPFQLSVARHATKNRVGFLKEVGSPGYRGERINQLIRQLN 247 The following BLAST results are available for this feature:
BLAST of CF832028 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832028 ID=CF832028; Name=CF832028; organism=Citrus sinensis; type=EST; length=769bpback to top |