CF832034

Overview
NameCF832034
Unique NameCF832034
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length772
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig5473 contig Csv1_Contig5473:325..1096. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832034 vs. ExPASy Swiss-Prot
Match: 1433S_SHEEP (14-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.541e-63
Identity = 118/204 (57.84%), Postives = 153/204 (75.00%), Query Frame = -1
Query:  161 AYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPES 772
            AYKNV+G +RA+WR++SSIEQK     +E+    +++YR K+ETEL  +CD +L LLD+ LI  A   +S+VFYLKMKGDY+RYLAE  TG ++K   +S  +AY+ A DI+  E+ PT+PIRLGLALNFSVF+YEI NSP+ A +LAK  FDEA+A+L TL E+SYKDSTLIMQLLRDNLTLWT+D   +   E  E  +P+S
Sbjct:   47 AYKNVVGGQRAAWRVLSSIEQKSNEESSEEKGPEVQEYREKVETELRGVCDTVLGLLDTHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGEAPE--EPQS 248          
BLAST of CF832034 vs. ExPASy Swiss-Prot
Match: 1433S_BOVIN (14-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=1)

HSP 1 Score: 240.736 bits (613), Expect = 6.541e-63
Identity = 118/204 (57.84%), Postives = 153/204 (75.00%), Query Frame = -1
Query:  161 AYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPES 772
            AYKNV+G +RA+WR++SSIEQK     +E+    +++YR K+ETEL  +CD +L LLD+ LI  A   +S+VFYLKMKGDY+RYLAE  TG ++K   +S  +AY+ A DI+  E+ PT+PIRLGLALNFSVF+YEI NSP+ A +LAK  FDEA+A+L TL E+SYKDSTLIMQLLRDNLTLWT+D   +   E  E  +P+S
Sbjct:   47 AYKNVVGGQRAAWRVLSSIEQKSNEESSEEKGPEVQEYREKVETELRGVCDTVLGLLDTHLIKEAGDAESRVFYLKMKGDYYRYLAEVATGDDKKRIIDSARSAYQEAMDISKKEMPPTNPIRLGLALNFSVFHYEIANSPEEAISLAKTTFDEAMADLHTLSEDSYKDSTLIMQLLRDNLTLWTADNAGEEGGEAPE--EPQS 248          
BLAST of CF832034 vs. ExPASy Swiss-Prot
Match: 1433_NEOCA (14-3-3 protein homolog OS=Neospora caninum PE=2 SV=1)

HSP 1 Score: 236.113 bits (601), Expect = 1.611e-61
Identity = 117/206 (56.80%), Postives = 151/206 (73.30%), Query Frame = -1
Query:  155 AYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDGADEIKEAAKPESEQ 772
            AYKN +GARRASWRIISS+EQKE S+ +  + +   +YR K+E EL+ IC  IL+LL  +LIP  S  +SKVFY KMKGDY+RY++EF     +K+AA+    +Y+ A + A      THPIRLGLALN+SVF+YEILN P +AC +AK+AFD+AI E D + E+SYKDSTLIMQLLRDNLTLWTSD+Q D   + +E  +  +EQ
Sbjct:   60 AYKNAVGARRASWRIISSVEQKELSKQHMQNKALAAEYRQKVEEELNKICHDILQLLTDKLIPKTSDSESKVFYYKMKGDYYRYISEFSGEEGKKQAADQAQESYQKATETAEGHSPATHPIRLGLALNYSVFFYEILNLPQQACEMAKRAFDDAITEFDNVSEDSYKDSTLIMQLLRDNLTLWTSDLQAD--QQQQEGGEKPAEQ 263          
BLAST of CF832034 vs. ExPASy Swiss-Prot
Match: 14332_ECHGR (14-3-3 protein homolog 2 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.461e-54
Identity = 106/191 (55.50%), Postives = 138/191 (72.25%), Query Frame = -1
Query:  200 AYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 772
            AYKNV+GARR+SWRI+SSI +K+      D       Y  K+E EL+ IC+ +L LL   LI      ++K+FY KM GDY+RYLAE + G +  ++ E+   AY+ A  +A AEL+ THPIRLGLALNFSVFYYEI N P++AC+LAK AFD AI E+D++ +E+YKDSTLIMQLLRDNLTLW+S+ + D
Sbjct:   60 AYKNVVGARRSSWRIMSSIAKKQAGTPLADQTDI---YLKKVEEELTKICNDVLALLSKNLITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQNDKSTEAAEEAYQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDNLTLWSSECETD 247          
BLAST of CF832034 vs. ExPASy Swiss-Prot
Match: 14332_ECHMU (14-3-3 protein homolog 2 OS=Echinococcus multilocularis PE=2 SV=1)

HSP 1 Score: 212.616 bits (540), Expect = 1.908e-54
Identity = 106/191 (55.50%), Postives = 137/191 (71.73%), Query Frame = -1
Query:  200 AYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 772
            AYKNV+GARR+SWRI+SSI +K+      D       Y  K+E EL+ IC+ +L LL   LI      ++K+FY KM GDY+RYLAE + G +  ++ E+   AY+ A  +A AEL+ THPIRLGLALNFSVFYYEI N P++AC+LAK AFD AI E+D++ +E+YKDSTLIMQLLRDNLTLW S+ + D
Sbjct:   60 AYKNVVGARRSSWRIMSSIAKKQAGTPLADQTDI---YLKKVEEELTKICNDVLALLSKNLITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQNDKSTEAAEEAYQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDNLTLWNSECETD 247          
BLAST of CF832034 vs. ExPASy Swiss-Prot
Match: 14331_SCHMA (14-3-3 protein homolog 1 OS=Schistosoma mansoni PE=2 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 9.467e-54
Identity = 110/192 (57.29%), Postives = 136/192 (70.83%), Query Frame = -1
Query:  197 AYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDDG 772
            AYKNV+GARR++WR+I   E K  +   +  ++   +YR K+E EL++IC+ +L LL+  L+P AS  DSKVF+LKM+GDY+RYLAE  T   R E  + +L AY  A   A   L  THPIRLGLALNFSVF+YEI N   +AC LAK AFD AIAELD L ++SYKDSTLIMQLLRDNLTLW SD   +G
Sbjct:   58 AYKNVVGARRSAWRVIHGSEMKAVNDRTKKQIA--EEYRIKMEKELNTICNQVLALLEDYLLPNASPDDSKVFFLKMQGDYYRYLAEVATDDARTEVVQKSLDAYTKATTAAE-NLPTTHPIRLGLALNFSVFFYEIQNDAAKACELAKSAFDSAIAELDQLQDDSYKDSTLIMQLLRDNLTLWASDQTAEG 246          
BLAST of CF832034 vs. ExPASy Swiss-Prot
Match: 14331_ECHMU (14-3-3 protein homolog 1 OS=Echinococcus multilocularis PE=2 SV=3)

HSP 1 Score: 197.978 bits (502), Expect = 4.862e-50
Identity = 103/193 (53.37%), Postives = 135/193 (69.95%), Query Frame = -1
Query:  200 AYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASS--GDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 772
            AYKNV+GARR+SWRI+SSI +K+      D       Y  K+E EL  IC+ +L L    ++P       ++K+FY KM GDY+RYLAE + G +  ++ E+   A + A  +A AEL+ THPIRLGLALNFSVFYYEI N P++AC+LAK AFD AI E+D++ +E+YKDSTLIMQLLRDNLTLW S+ + D
Sbjct:   57 AYKNVLGARRSSWRIMSSIAKKQAGTPLADQTDI---YLKKVEEELIPICNDVLAL---PVLPITEKIGAEAKIFYYKMMGDYYRYLAEVQEGEQNDKSTEAAEEANQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDNLTLWNSECETD 243          
BLAST of CF832034 vs. ExPASy Swiss-Prot
Match: 14331_ECHGR (14-3-3 protein homolog 1 OS=Echinococcus granulosus PE=2 SV=1)

HSP 1 Score: 193.356 bits (490), Expect = 1.198e-48
Identity = 103/193 (53.37%), Postives = 135/193 (69.95%), Query Frame = -1
Query:  200 AYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASS--GDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 772
            AYKNV+GARR+SWRI+SSI +K+       H   I  Y  K+E EL  IC+ +L L    ++P       ++K+FY KM GDY+RY AE + G +  ++ E+   A + A  +A AEL+ THPIRLGLALNFSVFYYEI N P++AC+LAK AFD AI E+D++ +E+YKDSTLIMQLLRDNLTLW S+ + D
Sbjct:   57 AYKNVVGARRSSWRIMSSIAKKQAGTPLA-HQHDI--YLKKVEEELIQICNDVLAL---PVLPITEKIGAEAKIFYYKMMGDYYRYSAEVQEGEQNDKSTEAAEEANQKATSLAEAELSVTHPIRLGLALNFSVFYYEIKNMPEKACSLAKAAFDAAITEVDSIKDETYKDSTLIMQLLRDNLTLWNSECETD 243          
BLAST of CF832034 vs. ExPASy Swiss-Prot
Match: 1433_ENCCU (14-3-3 protein homolog OS=Encephalitozoon cuniculi GN=ECU03_1010 PE=1 SV=1)

HSP 1 Score: 183.341 bits (464), Expect = 1.239e-45
Identity = 96/189 (50.79%), Postives = 130/189 (68.78%), Query Frame = -1
Query:  215 AYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDS---KVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTS 772
            AYKN++ +RR+SWR++ S  QK E + +   V  I +    +E EL   CD +L ++ + ++    +  +    +F+LKMKGDY+RY AE  TG E  E ++    +YK A + A   L PT+PI+LGLALN+SVF+YEILN  ++AC++AK AFDEAI ELDTL EE Y+DSTLIMQLLRDNLTLWTS
Sbjct:   54 AYKNLVSSRRSSWRMLCSERQKLEGK-DPSVVHVINEKIKVVEEELLRFCDEVLDIITTYILSLEEAQKNIEYNIFFLKMKGDYYRYKAEVVTGPEHSEVSKHAAESYKEATEKAKT-LPPTNPIKLGLALNYSVFHYEILNDSEKACSIAKGAFDEAIKELDTLSEEHYRDSTLIMQLLRDNLTLWTS 240          
BLAST of CF832034 vs. ExPASy Swiss-Prot
Match: 1433G_SHEEP (14-3-3 protein gamma (Fragments) OS=Ovis aries GN=YWHAG PE=1 SV=1)

HSP 1 Score: 171.014 bits (432), Expect = 6.365e-42
Identity = 98/191 (51.31%), Postives = 110/191 (57.59%), Query Frame = -1
Query:  200 AYKNVIGARRASWRIISSIEQKEESRGNEDHVSTIRDYRSKIETELSSICDGILKLLDSRLIPCASSGDSKVFYLKMKGDYHRYLAEFKTGAERKEAAESTLTAYKAAQDIANAELAPTHPIRLGLALNFSVFYYEILNSPDRACNLAKQAFDEAIAELDTLGEESYKDSTLIMQLLRDNLTLWTSDMQDD 772
            AYKNV+GARR+SWR+ISSIEQK                                                  FYLKMKGDY+RYLAE  TG +R    ES+  AY  A +I+   + PTHPIRLGLALN+SVFYYEI             AFD+AIAELDTL E+SYKDSTLIMQLLRDNLTLWTSD QDD
Sbjct:   25 AYKNVVGARRSSWRVISSIEQKTS------------------------------------------------FYLKMKGDYYRYLAEVATGEKRATVVESSEKAYSEAHEISKEHMQPTHPIRLGLALNYSVFYYEI------------TAFDDAIAELDTLNEDSYKDSTLIMQLLRDNLTLWTSDQQDD 155          
The following BLAST results are available for this feature:
BLAST of CF832034 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 143
Match NameE-valueIdentityDescription
1433S_SHEEP6.541e-6357.8414-3-3 protein sigma OS=Ovis aries GN=SFN PE=2 SV=... [more]
1433S_BOVIN6.541e-6357.8414-3-3 protein sigma OS=Bos taurus GN=SFN PE=2 SV=... [more]
1433_NEOCA1.611e-6156.8014-3-3 protein homolog OS=Neospora caninum PE=2 SV... [more]
14332_ECHGR1.461e-5455.5014-3-3 protein homolog 2 OS=Echinococcus granulosu... [more]
14332_ECHMU1.908e-5455.5014-3-3 protein homolog 2 OS=Echinococcus multilocu... [more]
14331_SCHMA9.467e-5457.2914-3-3 protein homolog 1 OS=Schistosoma mansoni PE... [more]
14331_ECHMU4.862e-5053.3714-3-3 protein homolog 1 OS=Echinococcus multilocu... [more]
14331_ECHGR1.198e-4853.3714-3-3 protein homolog 1 OS=Echinococcus granulosu... [more]
1433_ENCCU1.239e-4550.7914-3-3 protein homolog OS=Encephalitozoon cuniculi... [more]
1433G_SHEEP6.365e-4251.3114-3-3 protein gamma (Fragments) OS=Ovis aries GN=... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionUCRCS02_01D07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01D07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832034 ID=CF832034; Name=CF832034; organism=Citrus sinensis; type=EST; length=772bp
TTTTTTTTTTTTTTTAAAAAGAAAACTTAGTACATTCATAATTCCCTTAC
CAAGAGAAGAATGCCTAAATATTCAAAAGCAGGAACACTAGCAACAAACA
TCTTCTCCCTTTAAAAACAGTGGAGAAAGTTCAATCCCATCTGAATTCTC
ACTGTTGTTCGCTTTCAGGCTTGGCCGCTTCTTTAATCTCGTCTGCTCCA
TCATCCTGCATGTCGGAGGTCCACAGAGTGAGGTTGTCACGAAGAAGTTG
CATGATCAAAGTGCTATCCTTGTAGGACTCCTCACCCAGGGTATCCAACT
CAGCAATTGCCTCGTCAAAAGCCTGCTTGGCCAAATTGCAAGCACGATCA
GGAGAGTTCAGGATCTCATAGTAAAACACAGAGAAGTTCAGAGCCAGTCC
TAAACGGATGGGATGAGTCGGAGCCAATTCTGCATTTGCAATATCCTGAG
CGGCTTTATAAGCAGTGAGGGTACTCTCGGCGGCTTCCTTACGCTCGGCT
CCGGTCTTGAACTCAGCCAAGTACCTGTGATAATCTCCCTTCATCTTCAA
ATAGAAAACCTTGGAGTCACCAGAAGAAGCGCAAGGAATGAGGCGGGAGT
CAAGAAGCTTCAAGATGCCGTCGCAGATCGAGGAAAGCTCGGTCTCGATC
TTGGAGCGGTAATCTCGGATCGTGGAGACGTGGTCCTCGTTGCCGCGGCT
CTCCTCTTTCTGTTCGATGGAGGAAATAATGCGCCAGCTGGCACGGCGGG
CGCCGATGACGTTCTTGTAAGC
back to top