CF832036

Overview
NameCF832036
Unique NameCF832036
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length742
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig610 contig Csv1_Contig610:4..745. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832036 vs. ExPASy Swiss-Prot
Match: SUT2_ORYSI (Sucrose transport protein 2 OS=Oryza sativa subsp. indica GN=SUT2M PE=2 SV=2)

HSP 1 Score: 229.565 bits (584), Expect = 1.408e-59
Identity = 111/207 (53.62%), Postives = 145/207 (70.05%), Query Frame = 3
Query:  132 KIVMVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWSSLIWLCGPISGMIVQPIVGFHSDT---CKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHAAGDSVTD-SVKTRAIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNRRTRTANSFFSFFMAVGNVLGYAAGSYTHLYHMLPFTKSKACDVYCANLKTCFFLSIALL 740
            K++  AS+A GVQFGWALQLSLLTPYVQ LGIPH ++SL+WLCGP+SG++VQP+VG  SD      S  GRRRP                 ++AD+G   GDS+T  S +  AII++++GFW+LDV NN  QGPCRA LADL+ +  RRTR AN++FS FMA+GN+LGYA G+Y+  Y + PFT + +C + CANLK+ F L I +L
Sbjct:   26 KLLRAASVACGVQFGWALQLSLLTPYVQELGIPHAFASLVWLCGPLSGLLVQPLVGHLSDRIAPAASPLGRRRPFIAAGAASIAAAVLTVGFSADLGRIFGDSITPGSTRLGAIIVYLVGFWLLDVGNNATQGPCRAFLADLTENDPRRTRIANAYFSLFMALGNILGYATGAYSGWYKIFPFTVTPSCSISCANLKSAFLLDIIIL 232          
BLAST of CF832036 vs. ExPASy Swiss-Prot
Match: SUC3_ARATH (Sucrose transport protein SUC3 OS=Arabidopsis thaliana GN=SUC3 PE=1 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.230e-56
Identity = 106/207 (51.21%), Postives = 137/207 (66.18%), Query Frame = 3
Query:  135 IVMVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWSSLIWLCGPISGMIVQPIVGFHSDTCKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHAAGD-----SVTDSVKTRAIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNRRTRTANSFFSFFMAVGNVLGYAAGSYTHLYHMLPFTKSKACDVYCANLKTCFFLSIALL 740
            +V+  ++AAGVQFGWALQLSLLTPY+Q LGI H +SS IWLCGPI+G++VQP VG  SD C S++GRRRP                 ++ADIG+  GD     S     +TRA ++F+IGFW+LD+ANNT+QGP RALLADLSG   R   TAN+ F  +MA+GN+LG++AG+        PF  S+AC   C NLK  F L++  L
Sbjct:   63 LVLSCTVAAGVQFGWALQLSLLTPYIQTLGISHAFSSFIWLCGPITGLVVQPFVGIWSDKCTSKYGRRRPFILVGSFMISIAVIIIGFSADIGYLLGDSKEHCSTFKGTRTRAAVVFIIGFWLLDLANNTVQGPARALLADLSGPDQR--NTANAVFCLWMAIGNILGFSAGASGKWQEWFPFLTSRACCAACGNLKAAFLLAVVFL 267          
BLAST of CF832036 vs. ExPASy Swiss-Prot
Match: SUT1_SCHPO (General alpha-glucoside permease OS=Schizosaccharomyces pombe GN=sut1 PE=2 SV=1)

HSP 1 Score: 106.686 bits (265), Expect = 1.376e-22
Identity = 65/204 (31.86%), Postives = 101/204 (49.51%), Query Frame = 3
Query:  126 MWKIVMVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWSSLIWLCGPISGMIVQPIVGFHSDTCKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHAAGDSVTDSVKTRAIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNRRTRTANSFFSFFMAVGNVLGYAAGSYTHLYHMLPFTKSKACDVYCANLKTCFFLSIAL 737
            ++ I +  S+  GVQ  W+++L   TPY+  LG+  +W+S+IW+ GP++G+++QPI G  SD   SR GRRRP                 +A DI      +    +K   I++  I  ++LDVA N +    R+L+ D   S  +    ANS+    + VGNVLGY  G Y  LY +  F       V+C        L++ +
Sbjct:   34 LYLIALTVSLL-GVQLTWSVELGYGTPYLFSLGLRKEWTSIIWIAGPLTGILIQPIAGILSDRVNSRIGRRRPFMLCASLLGTFSLFLMGWAPDICLFIFSNEV-LMKRVTIVLATISIYLLDVAVNVVMASTRSLIVDSVRSDQQ--HEANSWAGRMIGVGNVLGYLLG-YLPLYRIFSFLNFTQLQVFCVLASISLVLTVTI 232          
BLAST of CF832036 vs. ExPASy Swiss-Prot
Match: S45A4_MOUSE (Solute carrier family 45 member 4 OS=Mus musculus GN=Slc45a4 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-16
Identity = 51/166 (30.72%), Postives = 83/166 (50.00%), Query Frame = 3
Query:  138 VMVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWSSLIWLCGPISGMIVQPIVGFHSDTCKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHAAGDSVTDSVKTRAIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNRRTRTANSFFSFFMAVGNVLGYAAG 635
            VM  ++  G +F +A++ +L+TP +  +G+P K+ SL W   P+ G+I  P++G  SD C   +GRRRP                   + IG A GD    S +   I++ V+G  +LD + +  +GP RA L D+  S  +    A +  +F   +G  +GY  G
Sbjct:   54 VMHGAVMFGREFCYAMETALVTPILLQIGLPEKYYSLTWFLSPVLGLIFTPLIGSASDRCTLSWGRRRPFILALCVGVLIGVALFLNGSAIGLALGD--VPSRQPIGIVLTVLGVVVLDFSADATEGPIRAYLLDVVDSEEQ--DMALNIHAFSAGLGGAIGYVLG 215          
BLAST of CF832036 vs. ExPASy Swiss-Prot
Match: S45A1_RAT (Proton-associated sugar transporter A OS=Rattus norvegicus GN=Slc45a1 PE=2 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-16
Identity = 49/169 (28.99%), Postives = 83/169 (49.11%), Query Frame = 3
Query:  129 WKIVMVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWSSLIWLCGPISGMIVQPIVGFHSDTCKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHAAGDSVTDSVKTRAIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNRRTRTANSFFSFFMAVGNVLGYAAG 635
            W+++    I  G++F +A++ + +TP +  +G+P +  SL+W   PI G ++QP++G  SD C SRFGRRRP                    DIG A  D+ T+      I++ V G  ++D + ++   P  A + D+ G  + + R  N   +    +G   GY  G
Sbjct:   85 WELLFNGCILFGIEFSYAMETAYVTPVLLQMGLPDQLYSLVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAIGALLGLSLLLNGRDIGMALADTATN--HKWGILLTVCGVVLMDFSADSADNPSHAYMMDVCGPVD-QDRGLN-IHALMAGLGGGFGYVVG 249          
BLAST of CF832036 vs. ExPASy Swiss-Prot
Match: S45A1_MOUSE (Proton-associated sugar transporter A OS=Mus musculus GN=Slc45a1 PE=2 SV=3)

HSP 1 Score: 87.0409 bits (214), Expect = 1.128e-16
Identity = 49/169 (28.99%), Postives = 83/169 (49.11%), Query Frame = 3
Query:  129 WKIVMVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWSSLIWLCGPISGMIVQPIVGFHSDTCKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHAAGDSVTDSVKTRAIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNRRTRTANSFFSFFMAVGNVLGYAAG 635
            W+++    I  G++F +A++ + +TP +  +G+P +  SL+W   PI G ++QP++G  SD C SRFGRRRP                    DIG A  D+ T+      I++ V G  ++D + ++   P  A + D+ G  + + R  N   +    +G   GY  G
Sbjct:   85 WELLFNGCILFGIEFSYAMETAYVTPVLLQMGLPDQLYSLVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAIGALLGLSLLLNGRDIGMALADTATN--HKWGILLTVCGVVLMDFSADSADNPSHAYMMDVCGPVD-QDRGLN-IHALMAGLGGGFGYVVG 249          
BLAST of CF832036 vs. ExPASy Swiss-Prot
Match: S45A4_HUMAN (Solute carrier family 45 member 4 OS=Homo sapiens GN=SLC45A4 PE=1 SV=2)

HSP 1 Score: 84.7297 bits (208), Expect = 5.600e-16
Identity = 50/166 (30.12%), Postives = 83/166 (50.00%), Query Frame = 3
Query:  138 VMVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWSSLIWLCGPISGMIVQPIVGFHSDTCKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHAAGDSVTDSVKTRAIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNRRTRTANSFFSFFMAVGNVLGYAAG 635
            VM  ++  G +F +A++ +L+TP +  +G+P ++ SL W   PI G+I  P++G  SD C   +GRRRP                   + IG A GD    + +   I++ V+G  +LD + +  +GP RA L D+  S  +    A +  +F   +G  +GY  G
Sbjct:   53 VMHGAVMFGREFCYAMETALVTPILLQIGLPEQYYSLTWFLSPILGLIFTPLIGSASDRCTLSWGRRRPFILALCVGVLFGVALFLNGSAIGLALGD--VPNRQPIGIVLTVLGVVVLDFSADATEGPIRAYLLDVVDSEEQ--DMALNIHAFSAGLGGAIGYVLG 214          
BLAST of CF832036 vs. ExPASy Swiss-Prot
Match: S45A1_HUMAN (Proton-associated sugar transporter A OS=Homo sapiens GN=SLC45A1 PE=2 SV=3)

HSP 1 Score: 78.9518 bits (193), Expect = 3.073e-14
Identity = 48/161 (29.81%), Postives = 80/161 (49.69%), Query Frame = 3
Query:  153 IAAGVQFGWALQLSLLTPYVQLLGIPHKWSSLIWLCGPISGMIVQPIVGFHSDTCKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHAAGDSVTDSVKTRAIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNRRTRTANSFFSFFMAVGNVLGYAAG 635
            I  G++F +A++ + +TP +  +G+P +  SL+W   PI G ++QP++G  SD C SRFGRRRP                    DIG A  D VT + K   +++ V G  ++D + ++   P  A + D+   ++ + R  N   +    +G   GY  G
Sbjct:  127 ILFGIEFSYAMETAYVTPVLLQMGLPDQLYSLVWFISPILGFLLQPLLGAWSDRCTSRFGRRRPFILVLAIGALLGLSLLLNGRDIGIALAD-VTGNHKW-GLLLTVCGVVLMDFSADSADNPSHAYMMDVCSPAD-QDRGLN-IHALLAGLGGGFGYVVG 283          
BLAST of CF832036 vs. ExPASy Swiss-Prot
Match: S45A2_MOUSE (Membrane-associated transporter protein OS=Mus musculus GN=Slc45a2 PE=1 SV=1)

HSP 1 Score: 77.411 bits (189), Expect = 8.941e-14
Identity = 50/182 (27.47%), Postives = 88/182 (48.35%), Query Frame = 3
Query:  132 KIVMVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWSSLIWLCGPISGMIVQPIVGFHSDTCKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHAAGDSVTDSVKTR-------AIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNRRTRTANSFFSFFMAVGNVLGYAAGS--YTHL 650
            ++VM +    G +F +A++ + +TP +  +G+P    S++WL  PI G ++QP+VG  SD C++R+GRRRP                       +  GD+V  ++          AI I ++G  + D + + + GP +A L D+   S++       + + F   G  LGY  G+  + HL
Sbjct:   34 RLVMHSMAMFGREFCYAVEAAYVTPVLLSVGLPKSLYSMVWLLSPILGFLLQPVVGSASDHCRARWGRRRPYILTLAIMMLLGMAL--------YLNGDAVVSALVANPRQKLIWAISITMVGVVLFDFSADFIDGPIKAYLFDV--CSHQDKEKGLHYHALFTGFGGALGYILGAIDWVHL 205          
BLAST of CF832036 vs. ExPASy Swiss-Prot
Match: S45A2_HUMAN (Membrane-associated transporter protein OS=Homo sapiens GN=SLC45A2 PE=1 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.525e-13
Identity = 49/175 (28.00%), Postives = 85/175 (48.57%), Query Frame = 3
Query:  132 KIVMVASIAAGVQFGWALQLSLLTPYVQLLGIPHKWSSLIWLCGPISGMIVQPIVGFHSDTCKSRFGRRRPXXXXXXXXXXXXXXXXXYAADIGHAAGDSVTDSVKTRAIIIFVIGFWILDVANNTLQGPCRALLADLSGSSNRRTRTANSFFSFFMAVGNVLGYAAGS--YTHL 650
            +++M +    G +F +A++ + +TP +  +G+P    S++W   PI G ++QP+VG  SD C+SR+GRRRP                   A +  A   +    +   AI + +IG  + D A + + GP +A L D+   S++       + + F   G  LGY  G+  + HL
Sbjct:   34 RLIMHSMAMFGREFCYAVEAAYVTPVLLSVGLPSSLYSIVWFLSPILGFLLQPVVGSASDHCRSRWGRRRPYILTLGVMMLVGMALYLNGATVVAALIANPRRKL-VWAISVTMIGVVLFDFAADFIDGPIKAYLFDV--CSHQDKEKGLHYHALFTGFGGALGYLLGAIDWAHL 205          
The following BLAST results are available for this feature:
BLAST of CF832036 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 20
Match NameE-valueIdentityDescription
SUT2_ORYSI1.408e-5953.62Sucrose transport protein 2 OS=Oryza sativa subsp.... [more]
SUC3_ARATH7.230e-5651.21Sucrose transport protein SUC3 OS=Arabidopsis thal... [more]
SUT1_SCHPO1.376e-2231.86General alpha-glucoside permease OS=Schizosaccharo... [more]
S45A4_MOUSE1.128e-1630.72Solute carrier family 45 member 4 OS=Mus musculus ... [more]
S45A1_RAT1.128e-1628.99Proton-associated sugar transporter A OS=Rattus no... [more]
S45A1_MOUSE1.128e-1628.99Proton-associated sugar transporter A OS=Mus muscu... [more]
S45A4_HUMAN5.600e-1630.12Solute carrier family 45 member 4 OS=Homo sapiens ... [more]
S45A1_HUMAN3.073e-1429.81Proton-associated sugar transporter A OS=Homo sapi... [more]
S45A2_MOUSE8.941e-1427.47Membrane-associated transporter protein OS=Mus mus... [more]
S45A2_HUMAN1.525e-1328.00Membrane-associated transporter protein OS=Homo sa... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01D08_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01D08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832036 ID=CF832036; Name=CF832036; organism=Citrus sinensis; type=EST; length=742bp
TTTTGGTAGCTCTATTTAGTTGGCTGGCCATGGAGAGTACCGAAGCAGGC
GCAGCTGCAGCAGCACCAACAAAGAATCAATCCTCAATTGAGCTACGGCG
GCCACCAACGCCGCCACCGTACCCGATGTGGAAGATCGTAATGGTGGCGT
CCATAGCAGCGGGGGTGCAATTCGGGTGGGCCCTGCAGCTCTCTCTTTTG
ACCCCCTACGTTCAGCTCCTGGGCATCCCTCACAAATGGTCTTCCCTCAT
TTGGCTCTGCGGCCCCATCTCTGGCATGATCGTCCAGCCCATCGTCGGCT
TCCACAGCGACACCTGCAAATCCCGCTTCGGCCGTCGCCGTCCCTTCATT
CTTGCCGGCGCCGTCCTCGTCGCCATCGCTGTGTTTCTCATCGGCTACGC
CGCCGACATAGGCCACGCCGCGGGCGACTCCGTTACCGATTCCGTCAAAA
CCCGCGCCATCATCATCTTCGTCATCGGCTTCTGGATTCTCGACGTCGCG
AATAACACATTACAAGGCCCATGCAGAGCCCTCCTCGCCGATCTCTCCGG
CAGCAGCAACAGGAGAACAAGAACCGCAAACTCGTTTTTCTCATTCTTCA
TGGCCGTCGGTAACGTGCTCGGCTATGCCGCCGGCTCCTACACTCACTTG
TACCACATGCTTCCGTTCACAAAGTCAAAAGCTTGCGACGTTTACTGTGC
AAATTTGAAAACGTGCTTCTTCCTCTCCATAGCTCTGCTAAT
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