CF832058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832058 vs. ExPASy Swiss-Prot
Match: RL32_YEAST (60S ribosomal protein L32 OS=Saccharomyces cerevisiae GN=RPL32 PE=1 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 2.834e-26 Identity = 62/119 (52.10%), Postives = 75/119 (63.03%), Query Frame = 1 Query: 55 KIVXXXXXXXXXPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARL 411 KIV SDR V ENWR+ KGIDS VRR+F+G + P IGYGS+KKT+ P+G K F+V NV +LE L MH +TY AEIAHN+S K R I+ RA L + VTN RL Sbjct: 8 KIVKKHTKKFKRHHSDRYHRVAENWRKQKGIDSVVRRRFRGNISQPKIGYGSNKKTKFLSPSGHKTFLVANVKDLETLTMHTKTYAAEIAHNISAKNRVVILARAKALGIKVTNPKGRL 126
BLAST of CF832058 vs. ExPASy Swiss-Prot
Match: RL32_CANAL (60S ribosomal protein L32 OS=Candida albicans GN=RPL32 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 3.701e-26 Identity = 61/127 (48.03%), Postives = 84/127 (66.14%), Query Frame = 1 Query: 31 MAVPLLTTKIVXXXXXXXXXPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARL 411 MA + KIV SDR V ENWR+ KGIDS VRR+F+G + PNIGYGS+KKT+ P G+K ++V NV +L++L++H ++Y AEIA +VS++KR EIV +A +L V VTN +L Sbjct: 1 MATSVPHPKIVKKYTKKFKRHHSDRYHRVAENWRKQKGIDSCVRRRFRGTIPQPNIGYGSNKKTKFLNPAGYKVYLVKNVKDLDVLLLHTKSYAAEIASSVSSRKRVEIVAKAKKLGVKVTNPKGKL 127
BLAST of CF832058 vs. ExPASy Swiss-Prot
Match: RL32_CANGA (60S ribosomal protein L32 OS=Candida glabrata GN=RPL32 PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 1.837e-25 Identity = 63/127 (49.61%), Postives = 78/127 (61.42%), Query Frame = 1 Query: 31 MAVPLLTTKIVXXXXXXXXXPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARL 411 MA L KIV SDR V ENWR+ KGIDS VRR+F+G + P IGYGS+KKT+ P+G K +V N+ +LE L MH ++Y AEIAHNVS+K R ++ RA L V VTN RL Sbjct: 1 MAASLPHPKIVKKHTKKFKRHHSDRYHRVSENWRKQKGIDSVVRRRFRGNISEPTIGYGSNKKTKFMSPSGHKVVLVSNLKDLETLTMHTKSYAAEIAHNVSSKNRVTLLARAKALGVKVTNAKGRL 127
BLAST of CF832058 vs. ExPASy Swiss-Prot
Match: RL32_ENCCU (60S ribosomal protein L32 OS=Encephalitozoon cuniculi GN=RPL32 PE=3 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 7.223e-22 Identity = 58/130 (44.62%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 40 PLLTTKIVXXXXXXXXXPQSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTNKLARLRSQEEE 429 PL+ K SDR VK +WRRP GIDS+VR++ KG MP+I Y K+ RH LPNG +K + N+N+L L NR YC EIAH V +KR IV RA +L + + N ARL + EE Sbjct: 10 PLVEIKEAYRKNKKFIRHHSDRYKRVKPSWRRPHGIDSKVRKRCKGEREMPSIKYKKPKEIRHLLPNGLRKVRIFNINDLTPLTSLNRFYCGEIAHAVGARKRIAIVNRAKELGICLLNGNARLIPEIEE 139
BLAST of CF832058 vs. ExPASy Swiss-Prot
Match: RL32_PYRFU (50S ribosomal protein L32e OS=Pyrococcus furiosus GN=rpl32e PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.010e-15 Identity = 44/90 (48.89%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 127 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 396 WRRPKGIDS++R K KG P+IG+ S K R P+G+++ +VHNV ELE L + A IAH V KKR EI++RA +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPKLVRGLHPSGYEEVLVHNVKELEAL--DPKRQAARIAHTVGKKKRIEIIKRAEELGIKVLN 127
BLAST of CF832058 vs. ExPASy Swiss-Prot
Match: RL32_PYRHO (50S ribosomal protein L32e OS=Pyrococcus horikoshii GN=rpl32e PE=3 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 2.939e-15 Identity = 43/90 (47.78%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 127 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 396 WRRPKGIDS++R K KG P+IG+ S + R P+G+++ ++HNV ELE L R A IAH V KKR EI++RA +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELERL--DPRRQAARIAHTVGKKKRIEILKRAEELGIKVLN 127
BLAST of CF832058 vs. ExPASy Swiss-Prot
Match: RL32_PYRAB (50S ribosomal protein L32e OS=Pyrococcus abyssi GN=rpl32e PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15 Identity = 42/90 (46.67%), Postives = 58/90 (64.44%), Query Frame = 1 Query: 127 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 396 WRRPKGIDS++R K KG P+IG+ S + R P+G+++ ++HNV ELE L + A IAH V KKR EI++RA +L + V N Sbjct: 40 WRRPKGIDSKMRLKLKGKPRSPSIGWSSPRLVRGLHPSGYEEVLIHNVKELEKL--DPKRQAARIAHTVGKKKRIEILKRAQELGIKVLN 127
BLAST of CF832058 vs. ExPASy Swiss-Prot
Match: RL32_METKA (50S ribosomal protein L32e OS=Methanopyrus kandleri GN=rpl32 PE=3 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.548e-15 Identity = 42/92 (45.65%), Postives = 59/92 (64.13%), Query Frame = 1 Query: 121 ENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 396 E WRRPKG S++RRK K MPN GYGS KK R P+G+++ +V+N +LE + + A IA V +KR+EI+E+A +L +VV N Sbjct: 41 EKWRRPKGRHSKMRRKLKSKPKMPNPGYGSPKKVRGLHPSGYEEVLVYNPKDLE--KIDPKRQAARIASRVGRRKRQEILEKAEELGIVVLN 130
BLAST of CF832058 vs. ExPASy Swiss-Prot
Match: RL32_TRIHA (60S ribosomal protein L32 OS=Trichoderma harzianum GN=rpl32 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 1.905e-14 Identity = 44/89 (49.44%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 94 QSDRKISVKENWRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELL----MMHNRTYCAEIAHNVSTKKR 348 QSDR V +WR+PKGID RVRR+F+G + MP IGYGS+KKTR P+G F +HN L M AEIA VS++KR Sbjct: 22 QSDRFDRVGSSWRKPKGIDGRVRRRFRGTIRMPKIGYGSNKKTRFLTPSGHNAF-LHNARTLSCAAGCSMQSTDPSAAEIATPVSSRKR 109
BLAST of CF832058 vs. ExPASy Swiss-Prot
Match: RL32_THESM (50S ribosomal protein L32e OS=Thermococcus sibiricus (strain MM 739 / DSM 12597) GN=rpl32e PE=3 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 3.593e-13 Identity = 39/90 (43.33%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 127 WRRPKGIDSRVRRKFKGCVLMPNIGYGSDKKTRHYLPNGFKKFVVHNVNELELLMMHNRTYCAEIAHNVSTKKRKEIVERAAQLDVVVTN 396 WR+PKG DS++R K KG P+IG+ S K R P+G+++ +V+NV +LEL+ ++ A IA V KKR I+ERA +L + V N Sbjct: 38 WRKPKGTDSKMRVKLKGKARSPSIGWSSPKAVRGLHPSGYEEVLVYNVKDLELI--DSKRQAARIAATVGKKKRIMIIERARELGIKVLN 125 The following BLAST results are available for this feature:
BLAST of CF832058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 51
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832058 ID=CF832058; Name=CF832058; organism=Citrus sinensis; type=EST; length=655bpback to top |