CF832063
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_THETN (50S ribosomal protein L2 OS=Thermoanaerobacter tengcongensis GN=rplB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.080e-18 Identity = 56/139 (40.29%), Postives = 78/139 (56.12%), Query Frame = -2 Query: 381 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQ-HIGH 782 V G+ + VGN LP+R+IP G +V N+E G G L RA+G A +++ + D +++PSG ++I + CRA IGQV+ + KAG R+ W P VRG AMNPV+HPHGGG + IGH Sbjct: 116 VESGENVDIKVGNALPLRNIPVGTIVHNIELIPGKGGQLVRAAGAAAQLMA--KEGDYVHIRMPSGEIRLINANCRATIGQVSNIDHENVKIGKAG---------RSRWLGIRPTVRGSAMNPVDHPHGGGEGKAPIGH 243
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_SODGM (50S ribosomal protein L2 OS=Sodalis glossinidius (strain morsitans) GN=rplB PE=3 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.080e-18 Identity = 54/133 (40.60%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + I S CRA +G+V + L KAG + R P VRG AMNPV+HPHGGG ++ G Sbjct: 116 IQSGVDAAIKAGNALPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGAYVTLRLRSGEMRKIQSECRATLGEVGNAEHMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RK2_PHAAO (50S ribosomal protein L2, chloroplastic OS=Phalaenopsis aphrodite subsp. formosana GN=rpl2-A PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.080e-18 Identity = 52/131 (39.69%), Postives = 72/131 (54.96%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 782 + G + + +GN LP+ +P G + N+E +G G LARA+G A +I+ + T R LPSG ++I C A +GQV G +K L +AG+ CW P VRGV MNPV+HPHGGG Sbjct: 114 IVSGTEVPISMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLR--LPSGEVRLISKNCLATVGQVGNVGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGG 233
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RK2_LEMMI (50S ribosomal protein L2, chloroplastic OS=Lemna minor GN=rpl2 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 5.080e-18 Identity = 52/131 (39.69%), Postives = 72/131 (54.96%), Query Frame = -2 Query: 402 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 782 + G + + +GN LP+ +P G + N+E +G G LARA+G A +I+ + T R LPSG ++I C A +GQV G +K L +AG+ CW P VRGV MNPV+HPHGGG Sbjct: 114 IVSGTEVPISMGNALPLTDMPLGTAIHNIEITLGKGGQLARAAGAVAKLIAKEGKSATLR--LPSGEVRLISKNCLATVGQVGNVGVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGG 233
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RM02_MARPO (60S ribosomal protein L2, mitochondrial OS=Marchantia polymorpha GN=RPL2 PE=3 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 6.635e-18 Identity = 55/129 (42.64%), Postives = 74/129 (57.36%), Query Frame = -2 Query: 369 MVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV 755 MVGN +P+ IP G V N+E + G L RA+G +A II + V+LPSG K+I S CRA IG V+ ++ KAG + ++ +R P VRGVAMNPV+HPHGGG + G +V Sbjct: 358 MVGNCIPLAKIPIGTWVHNIERNPGQGAKLTRAAGTFAQIIQKVENTPQCIVRLPSGVDKLIDSRCRATIGIVSNLNHGKRKFNKAGQS--RWLGRR---PIVRGVAMNPVDHPHGGGEGRTKGGRPSV 481
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_YERPY (50S ribosomal protein L2 OS=Yersinia pseudotuberculosis serotype O:3 (strain YPIII) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.635e-18 Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG + R P VRG AMNPV+HPHGGG ++ G Sbjct: 116 IQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGSYVTLRLRSGEMRKVQADCRATLGEVGNAEHMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_YERPS (50S ribosomal protein L2 OS=Yersinia pseudotuberculosis GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.635e-18 Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG + R P VRG AMNPV+HPHGGG ++ G Sbjct: 116 IQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGSYVTLRLRSGEMRKVQADCRATLGEVGNAEHMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_YERPP (50S ribosomal protein L2 OS=Yersinia pestis (strain Pestoides F) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.635e-18 Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG + R P VRG AMNPV+HPHGGG ++ G Sbjct: 116 IQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGSYVTLRLRSGEMRKVQADCRATLGEVGNAEHMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_YERPN (50S ribosomal protein L2 OS=Yersinia pestis bv. Antiqua (strain Nepal516) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.635e-18 Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG + R P VRG AMNPV+HPHGGG ++ G Sbjct: 116 IQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGSYVTLRLRSGEMRKVQADCRATLGEVGNAEHMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHPHGGGEGRNFG 241
BLAST of CF832063 vs. ExPASy Swiss-Prot
Match: RL2_YERPG (50S ribosomal protein L2 OS=Yersinia pestis bv. Antiqua (strain Angola) GN=rplB PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 6.635e-18 Identity = 52/133 (39.10%), Postives = 73/133 (54.89%), Query Frame = -2 Query: 384 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 782 + G A + GN LP+R+IP G+ V NVE G G LAR++G Y I++ D ++L SG + + + CRA +G+V + L KAG + R P VRG AMNPV+HPHGGG ++ G Sbjct: 116 IQSGVDAAIKAGNTLPMRNIPVGSTVHNVEMKPGKGGQLARSAGAYVQIVAR--DGSYVTLRLRSGEMRKVQADCRATLGEVGNAEHMLRVLGKAGASRW-----RGIRPTVRGTAMNPVDHPHGGGEGRNFG 241 The following BLAST results are available for this feature:
BLAST of CF832063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832063 ID=CF832063; Name=CF832063; organism=Citrus sinensis; type=EST; length=789bpback to top |