CF832064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_FRATF (50S ribosomal protein L2 OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.358e-16 Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 V G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 117 VISGEKVDIAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_CLOPH (50S ribosomal protein L2 OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.358e-16 Identity = 51/129 (39.53%), Postives = 69/129 (53.49%), Query Frame = 3 Query: 3 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 389 Q V G A + VGN LP+ +IP G+ + N+E + G G L R++G+ A +++ T R LPSG +++P CRA +GQV L KAG H P VRG MNP +HPHGGG Sbjct: 114 QTVMNGATAEIKVGNCLPLANIPVGSQIHNIELYPGKGGQLVRSAGNSAQLMAREGKYATLR--LPSGEMRMVPISCRATLGQVGNIDHELVTLGKAGRVRH-----MGIRPTVRGSVMNPNDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_CLOBM (50S ribosomal protein L2 OS=Clostridium botulinum (strain Loch Maree / Type A3) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.358e-16 Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHAS 416 V G ++ + VGN LP+R+IP G V+ N+E G L R++G+ A +++ + D ++V+LPSG + I CRA IG V+ + KAG H P VRG MNP +HPHGGG IGH S Sbjct: 116 VVSGPESDIKVGNCLPIRNIPVGTVIHNIELAAGKGAQLVRSAGNSAQLMA--KEGDYSQVRLPSGEVRYIRVECRATIGVVSNQTSEIVNIGKAGRKRH-----MGVRPTVRGSVMNPNDHPHGGGEGRSPIGHPS 245
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_CLOBL (50S ribosomal protein L2 OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.358e-16 Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHAS 416 V G ++ + VGN LP+R+IP G V+ N+E G L R++G+ A +++ + D ++V+LPSG + I CRA IG V+ + KAG H P VRG MNP +HPHGGG IGH S Sbjct: 116 VVSGPESDIKVGNCLPIRNIPVGTVIHNIELAAGKGAQLVRSAGNSAQLMA--KEGDYSQVRLPSGEVRYIRVECRATIGVVSNQTSEIVNIGKAGRKRH-----MGVRPTVRGSVMNPNDHPHGGGEGRSPIGHPS 245
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_CLOBJ (50S ribosomal protein L2 OS=Clostridium botulinum (strain Kyoto / Type A2) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.358e-16 Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHAS 416 V G ++ + VGN LP+R+IP G V+ N+E G L R++G+ A +++ + D ++V+LPSG + I CRA IG V+ + KAG H P VRG MNP +HPHGGG IGH S Sbjct: 116 VVSGPESDIKVGNCLPIRNIPVGTVIHNIELAAGKGAQLVRSAGNSAQLMA--KEGDYSQVRLPSGEVRYIRVECRATIGVVSNQTSEIVNIGKAGRKRH-----MGVRPTVRGSVMNPNDHPHGGGEGRSPIGHPS 245
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_CLOBH (50S ribosomal protein L2 OS=Clostridium botulinum (strain Hall / ATCC 3502 / NCTC 13319 / Type A) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.358e-16 Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHAS 416 V G ++ + VGN LP+R+IP G V+ N+E G L R++G+ A +++ + D ++V+LPSG + I CRA IG V+ + KAG H P VRG MNP +HPHGGG IGH S Sbjct: 116 VVSGPESDIKVGNCLPIRNIPVGTVIHNIELAAGKGAQLVRSAGNSAQLMA--KEGDYSQVRLPSGEVRYIRVECRATIGVVSNQTSEIVNIGKAGRKRH-----MGVRPTVRGSVMNPNDHPHGGGEGRSPIGHPS 245
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_CLOB1 (50S ribosomal protein L2 OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.358e-16 Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHAS 416 V G ++ + VGN LP+R+IP G V+ N+E G L R++G+ A +++ + D ++V+LPSG + I CRA IG V+ + KAG H P VRG MNP +HPHGGG IGH S Sbjct: 116 VVSGPESDIKVGNCLPIRNIPVGTVIHNIELAAGKGAQLVRSAGNSAQLMA--KEGDYSQVRLPSGEVRYIRVECRATIGVVSNQTSEIVNIGKAGRKRH-----MGVRPTVRGSVMNPNDHPHGGGEGRSPIGHPS 245
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACCR (50S ribosomal protein L2 OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.358e-16 Identity = 53/131 (40.46%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 V G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA IGQV G + L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 VMSGPEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRASIGQV---GNEQHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACC4 (50S ribosomal protein L2 OS=Bacillus cereus (strain B4264) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.358e-16 Identity = 53/131 (40.46%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 V G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA IGQV G + L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 VMSGPEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRASIGQV---GNEQHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACC2 (50S ribosomal protein L2 OS=Bacillus cereus (strain G9842) GN=rplB PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.358e-16 Identity = 53/131 (40.46%), Postives = 72/131 (54.96%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 V G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA IGQV G + L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 VMSGPEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRASIGQV---GNEQHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of CF832064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832064 ID=CF832064; Name=CF832064; organism=Citrus sinensis; type=EST; length=749bpback to top |