CF832064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RK2_MARPO (50S ribosomal protein L2, chloroplastic OS=Marchantia polymorpha GN=rpl2 PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.358e-16 Identity = 48/127 (37.80%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 389 + ++A +++GN LP+ ++P G + N+E G G L RA+G A II+ + ++LPSG ++I C A IGQ+ G + L+ G A K + + PKVRGV MNP++HPHGGG Sbjct: 116 IISSEEAPILIGNTLPLTNMPLGTAIHNIEITPGKGGQLVRAAGTVAKIIAK--EGQLVTLRLPSGEIRLISQKCLATIGQI---GNVDVNNLRIGKAGSKRWLGKR--PKVRGVVMNPIDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RM02_RECAM (60S ribosomal protein L2, mitochondrial OS=Reclinomonas americana GN=RPL2 PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 51/138 (36.96%), Postives = 79/138 (57.25%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV 422 V G + +GN LP+R+IP G ++ N+E + G G + R++G A +IS + +N +KLPSG ++ P+ A IG ++ + KAG + ++ +R P VRGVAMNPV+HPHGGG + G +V Sbjct: 116 VITGNDIDIRIGNTLPLRNIPIGTMIHNIELNPGKGGKIVRSAGSSAQLISKD-ENGFCMLKLPSGEYRLFPNNSLATIGILSNIDNKNIKIGKAGRS--RWMGRR---PIVRGVAMNPVDHPHGGGEGKTSGGRPSV 247
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_SHEPW (50S ribosomal protein L2 OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 51/133 (38.35%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 + G A + GN +P+R+IP G+VV VE G +AR++G Y +I+ D ++L SG + +P CRA +G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 116 IQSGIDAEIKSGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVIAR--DGAYATLRLRSGEMRKVPVDCRATLGEVGNAEHMLRQLGKAGA-----KRWRGVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_SHEHH (50S ribosomal protein L2 OS=Shewanella halifaxensis (strain HAW-EB4) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 51/133 (38.35%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 + G A + GN +P+R+IP G+VV VE G +AR++G Y +I+ D ++L SG + +P CRA +G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 116 IQSGIDAEIKSGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVIAR--DGAYATLRLRSGEMRKVPVDCRATLGEVGNAEHMLRQLGKAGA-----KRWRGVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_SHEB9 (50S ribosomal protein L2 OS=Shewanella baltica (strain OS195) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 + G A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 116 IQSGVAAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_SHEB8 (50S ribosomal protein L2 OS=Shewanella baltica (strain OS185) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 + G A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 116 IQSGVAAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_SHEB5 (50S ribosomal protein L2 OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 + G A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 116 IQSGVAAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_SHEB2 (50S ribosomal protein L2 OS=Shewanella baltica (strain OS223) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 50/133 (37.59%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 + G A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 116 IQSGVAAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_PSEHT (50S ribosomal protein L2 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 51/134 (38.06%), Postives = 73/134 (54.48%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 + G A + GN LP+R++P G+ V NVE G +AR++G Y I++ D ++L SG + + + CRA +G+V + L KAG N + R P VRGVAMNPV+HPHGGG + G Sbjct: 116 IQSGVDAPIKPGNALPMRNMPVGSTVHNVELKPGKGAQIARSAGAYVQILAR--DGQYVTLRLRSGEVRKVEADCRATLGEVGNAEHMLRSLGKAGANRWRGIR------PTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_OCEIH (50S ribosomal protein L2 OS=Oceanobacillus iheyensis GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 54/133 (40.60%), Postives = 74/133 (55.64%), Query Frame = 3 Query: 3 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 Q + G+ A + +GN LP+ SIP G V+ N+E G G +AR++G A I+ + T V+L SG ++I + CRA IGQV G E L++ G A R+ W P VRG MNP +HPHGGG Sbjct: 114 QEIESGENADIKLGNALPLGSIPVGTVIHNIELKPGRGGQIARSAGAEAQILGR--EEKYTLVRLSSGEVRLILTTCRATIGQV---GNIEHELVRVGKA------GRSRWKGIRPTVRGSVMNPNDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of CF832064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832064 ID=CF832064; Name=CF832064; organism=Citrus sinensis; type=EST; length=749bpback to top |