CF832064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_FRATW (50S ribosomal protein L2 OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 V G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 117 VISGEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_FRATT (50S ribosomal protein L2 OS=Francisella tularensis subsp. tularensis GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 V G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 117 VISGEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_FRATN (50S ribosomal protein L2 OS=Francisella tularensis subsp. novicida (strain U112) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 V G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 117 VISGEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_FRATM (50S ribosomal protein L2 OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 V G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 117 VISGEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_FRAT1 (50S ribosomal protein L2 OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 V G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 117 VISGEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_FRAP2 (50S ribosomal protein L2 OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 51/133 (38.35%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 V G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 117 VVSGEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_COLP3 (50S ribosomal protein L2 OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 50/133 (37.59%), Postives = 73/133 (54.89%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 + G A + GN +P+R+IP G+V+ +E G +ARA+G YA +++ D ++L SG + I S CRA +G++ + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 116 ILSGVGAPIKPGNTMPLRNIPLGSVIHAIELKPGKGAQIARAAGTYAQLVAK--DGAYVTLRLRSGEMRKIESDCRATLGEIGNSEHMLRSLGKAGASRW-----RGVRPTVRGVAMNPVDHPHGGGEGKTSG 241
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_CLOBK (50S ribosomal protein L2 OS=Clostridium botulinum (strain Okra / Type B1) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 53/137 (38.69%), Postives = 74/137 (54.01%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHAS 416 V G ++ + VGN LP+R+IP G V+ N+E G L R++G+ A +++ + D ++V+LPSG + I CRA IG V+ + KAG H P VRG MNP +HPHGGG IGH S Sbjct: 116 VVSGPESDIKVGNCLPIRNIPVGTVIHNIELAPGKGAQLVRSAGNSAQLMA--KEGDYSQVRLPSGEVRYIRVECRATIGVVSNQTNEIVNIGKAGRKRH-----MGVRPTVRGSVMNPNDHPHGGGEGRSPIGHPS 245
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_CHLSY (50S ribosomal protein L2 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 389 V G A + VGN LP+ +IP G + N+E +G GVL R++G A +++ + D V++PSG ++I C A IGQV L KAG + ++ +R P+VRG AMNP +HPHGGG Sbjct: 116 VMSGPDAEIRVGNALPLSAIPLGTQIHNIELEIGRGGVLVRSAGTAAQLMA--KEGDYAIVRMPSGEMRMIHLRCMATIGQVGNVDHQNIRLGKAGRS--RWLGRR---PRVRGAAMNPRDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_CHLAA (50S ribosomal protein L2 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rplB PE=3 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 4.385e-16 Identity = 51/127 (40.16%), Postives = 73/127 (57.48%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 389 V G A + VGN LP+ +IP G + N+E +G GVL R++G A +++ + D V++PSG ++I C A IGQV L KAG + ++ +R P+VRG AMNP +HPHGGG Sbjct: 116 VMSGPDAEIRVGNALPLSAIPLGTQIHNIELEIGRGGVLVRSAGTAAQLMA--KEGDYAIVRMPSGEMRMIHLRCMATIGQVGNVDHQNIRLGKAGRS--RWLGRR---PRVRGAAMNPRDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of CF832064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832064 ID=CF832064; Name=CF832064; organism=Citrus sinensis; type=EST; length=749bpback to top |