CF832064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_NEIMA (50S ribosomal protein L2 OS=Neisseria meningitidis serogroup A GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 50/125 (40.00%), Postives = 72/125 (57.60%), Query Frame = 3 Query: 18 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 389 G +A + VGN LP+R+IP G + +E G +AR++G AV+++ + +V+L SG + I CRA IG+V ++ K + KAG N + R P VRGV MNPV+HPHGGG Sbjct: 119 GAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLA--KEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIR------PTVRGVVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_DESAD (50S ribosomal protein L2 OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/137 (37.23%), Postives = 74/137 (54.01%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 407 + G+KA + GN L +++IP G +V N+E + G G RA+G YA +I+ + +++PSG + + + C A +GQV L KAG RN W PKVRGVAMNP++HP GGG + G Sbjct: 116 ILAGEKADIKPGNALLLKNIPVGTIVHNIELYPGKGGQFCRAAGTYAQLIA--KEGKYALLRMPSGEVRKVLATCCATVGQVGNIHHENITLGKAG---------RNRWLGRRPKVRGVAMNPIDHPLGGGEGRSSG 241
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_CYAP4 (50S ribosomal protein L2 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 52/131 (39.69%), Postives = 67/131 (51.15%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 + G A + VGN LP+ IP G V NVE G G + RA+G A +++ + D +KLPSG ++ C A IGQ+ + KAG RN W PKVRG MNPV+HPHGGG Sbjct: 116 IAAGPDAAIEVGNALPLSKIPLGTGVHNVEITPGRGGQMVRAAGAMAQVVA--KEGDMVTLKLPSGEVRLFRKECYATIGQIGNVDVNNISIGKAG---------RNRWKGRRPKVRGSVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_CAUSK (50S ribosomal protein L2 OS=Caulobacter sp. (strain K31) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 50/144 (34.72%), Postives = 74/144 (51.39%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPP 440 V K + GN P+R++P G ++ NVE G +AR++G YA ++ D +++L SG +++ C A +G V+ + + L KAG H R P VRGVAMNPV+HPHGGG + G + V P Sbjct: 116 VVTADKVDVKPGNTSPLRTMPIGTIIHNVELKPAKGGQIARSAGAYAQLVGR--DAGYAQIRLNSGELRMVLDTCLATVGAVSNPDHSNQNLGKAGRVRHMGRR-----PHVRGVAMNPVDHPHGGGEGRTSGGRNPVTPAGKP 252
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACHK (50S ribosomal protein L2 OS=Bacillus thuringiensis subsp. konkukian GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 + G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 IMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACHD (50S ribosomal protein L2 OS=Bacillus halodurans GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = 3 Query: 18 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 G +A + VGN LP+++IP G V+ N+E G G L R++G A ++ + D V+L SG + I + CRA IGQV G E L+ G A R+ W P VRG AMNP +HPHGGG Sbjct: 119 GPEADIKVGNALPLKNIPVGTVIHNIELKPGKGGQLVRSAGAEAQLL--GKEGDYVLVRLNSGETRYILATCRATIGQV---GNLEHELVNIGKA------GRSRWLGKRPTVRGSAMNPNDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACCZ (50S ribosomal protein L2 OS=Bacillus cereus (strain ZK / E33L) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 + G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 IMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACCQ (50S ribosomal protein L2 OS=Bacillus cereus (strain Q1) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 + G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 IMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRAAVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACC7 (50S ribosomal protein L2 OS=Bacillus cereus (strain AH187) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 + G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 IMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACC3 (50S ribosomal protein L2 OS=Bacillus cereus (strain 03BB102) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 + G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 IMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of CF832064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832064 ID=CF832064; Name=CF832064; organism=Citrus sinensis; type=EST; length=749bpback to top |