CF832064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACC1 (50S ribosomal protein L2 OS=Bacillus cereus (strain ATCC 10987) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 + G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 IMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACC0 (50S ribosomal protein L2 OS=Bacillus cereus (strain AH820) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 + G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 IMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACAN (50S ribosomal protein L2 OS=Bacillus anthracis GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 + G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 IMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACAH (50S ribosomal protein L2 OS=Bacillus thuringiensis (strain Al Hakam) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 + G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 IMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACAC (50S ribosomal protein L2 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 + G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 IMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_BACAA (50S ribosomal protein L2 OS=Bacillus anthracis (strain A0248) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/131 (38.93%), Postives = 71/131 (54.20%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 389 + G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 116 IMSGAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_ALKMQ (50S ribosomal protein L2 OS=Alkaliphilus metalliredigens (strain QYMF) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 52/141 (36.88%), Postives = 76/141 (53.90%), Query Frame = 3 Query: 3 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHASTV 422 + ++ G ++ + VGN LP+ +IP G ++ N+E G G +AR++G+ A +++ + V+LPSG + I CRA IGQV + KAG + K P VRG AMNP +HPHGGG IG S V Sbjct: 114 EMIFSGPESDIKVGNALPLINIPVGTIIHNIEMKPGKGGQIARSAGNSAQLMA--KEGRYALVRLPSGEVRQILIECRATIGQVGNLDHENVTIGKAGR-----KRKMGIRPTVRGSAMNPNDHPHGGGEGRSPIGRPSPV 247
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_ACIF5 (50S ribosomal protein L2 OS=Acidithiobacillus ferrooxidans (strain ATCC 53993) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/133 (38.35%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 V ++ + GN +P+R IP G+VV NVE G G +AR++G +++ + D +++L SG + I CRA IG+V + L KAG R P VRGVAMNPV+HPHGGG + G Sbjct: 116 VLSAEQTPIKPGNCMPLRGIPVGSVVHNVEMRPGKGGQIARSAGASVQLMAR--EGDYAQLRLRSGEVRRIHVSCRATIGEVGNEEHGSRQLGKAGATRW-----RGVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_ACIF2 (50S ribosomal protein L2 OS=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 51/133 (38.35%), Postives = 72/133 (54.14%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 407 V ++ + GN +P+R IP G+VV NVE G G +AR++G +++ + D +++L SG + I CRA IG+V + L KAG R P VRGVAMNPV+HPHGGG + G Sbjct: 116 VLSAEQTPIKPGNCMPLRGIPVGSVVHNVEMRPGKGGQIARSAGASVQLMAR--EGDYAQLRLRSGEVRRIHVSCRATIGEVGNEEHGSRQLGKAGATRW-----RGVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_ACIBY (50S ribosomal protein L2 OS=Acinetobacter baumannii (strain AYE) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.769e-16 Identity = 53/147 (36.05%), Postives = 80/147 (54.42%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 449 V G A + GN LP+R++P G+ + NVE +G LAR++G ++ D ++L SG + + CRA+IG+V+ + L KAG A R P VRG+AMNP++HPHGGG ++ G ++ +P GQK Sbjct: 116 VQSGNDAPIRPGNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGASVQLLGR--DGSYAIIRLRSGEMRKVHVECRAVIGEVSNQENNLRSLGKAGAARW-----RGVRPTVRGMAMNPIDHPHGGGEGRNKG----IQPVSPWGQK 251 The following BLAST results are available for this feature:
BLAST of CF832064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832064 ID=CF832064; Name=CF832064; organism=Citrus sinensis; type=EST; length=749bpback to top |