CF832064
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_METBF (50S ribosomal protein L2P OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=rpl2p PE=3 SV=1) HSP 1 Score: 154.451 bits (389), Expect = 5.886e-37 Identity = 72/151 (47.68%), Postives = 102/151 (67.55%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 461 + CG A + GN++P+ +PEG +CN+E D G R+SG YA +++H +++ T V +PSG K + CRA++G VAGGGR ++P LKAG YHK + + +P+V GVAMNPV+HP GGG +H G +TV R+APPG+KVGLI Sbjct: 81 IECGDDADVRPGNIVPIGKVPEGFFICNIESKPNDGGRFVRSSGVYATVVTH--ESNRTAVAMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSGVAMNPVDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLI 229
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_METKA (50S ribosomal protein L2P OS=Methanopyrus kandleri GN=rpl2p PE=3 SV=1) HSP 1 Score: 153.68 bits (387), Expect = 1.004e-36 Identity = 78/151 (51.66%), Postives = 95/151 (62.91%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 461 + CG A + GN LP+ IPEG + N+E GD G ARA G YA II+H D T V+LPSG + CRA IG ++GGG+ EKP +KAG Y+ R K WPKVRGVAMN V+HP GGGNHQ G +T+ R PPG+KVG I Sbjct: 84 IECGVSAEIKPGNTLPLAEIPEGVPIFNIEGQPGDGGKFARAPGCYATIIAH--DVGRTYVQLPSGKVRTFDPRCRATIGVMSGGGKREKPFVKAGKKYYHMRSKGGKWPKVRGVAMNAVDHPFGGGNHQSPGKPTTIARGDPPGRKVGHI 232
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_CALMQ (50S ribosomal protein L2P OS=Caldivirga maquilingensis (strain DSMZ 13496 / IC-167) GN=rpl2p PE=3 SV=1) HSP 1 Score: 152.91 bits (385), Expect = 1.713e-36 Identity = 79/146 (54.11%), Postives = 99/146 (67.81%), Query Frame = 3 Query: 18 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 455 G A + GNV+P+ IPEG +VCN+E VGD G AR+SG Y V++ H + TT V+LPSG + S RA IG VAGGGR EKP +KAGN YH+ R K +PKVRG AM+ HPHGGG+HQ G + V+++APPGQKVG Sbjct: 87 GPDAKVEPGNVMPIGKIPEGTMVCNIEKRVGDGGKYARSSGTYGVVMIHR--DSTTLVQLPSGRMIEVDSRARATIGIVAGGGRIEKPFVKAGNKYHRARTKAWKYPKVRGKAMSAYAHPHGGGSHQQGG--TPVKKNAPPGQKVG 228
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_PYRKO (50S ribosomal protein L2P OS=Pyrococcus kodakaraensis GN=rpl2p PE=3 SV=1) HSP 1 Score: 152.525 bits (384), Expect = 2.237e-36 Identity = 79/153 (51.63%), Postives = 97/153 (63.40%), Query Frame = 3 Query: 3 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 461 Q +Y G +A + +GN LP+ IPEG V ++E GD G RA G YA+++S + D V+LPSG K CRA IG VAGGGR EKP++KAG AY+ + + WPK RGV MN V HPHGG H HIG STV R APPG+KVG I Sbjct: 81 QEIYIGPEAPIAIGNTLPLAKIPEGTYVYDIEGVPGDGGKYVRAGGTYALVVSR--EKDKVIVQLPSGELKAFNPMCRATIGVVAGGGRLEKPIVKAGKAYYIAKARNRFWPKPRGVKMNAVNHPHGGKEH-HIGRPSTVSRRAPPGRKVGHI 230
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_SULAC (50S ribosomal protein L2P OS=Sulfolobus acidocaldarius GN=rpl2p PE=3 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 2.921e-36 Identity = 80/153 (52.29%), Postives = 97/153 (63.40%), Query Frame = 3 Query: 3 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 461 Q + GK AT+ GN++ V +PEG V+CNVE GD G ARA+G YAVI + +KL S + RA +G +AGGG EKPLLKAGN Y K+RV+ WP VRGVAMN V HPHGGG HQ + STV R+APPG+KVG I Sbjct: 77 QEISIGKNATISNGNIVEVGQLPEGTVICNVEKLKGDGGKFARAAGSYAVI--SGKAGNKVLIKLSSEKIVEVSQNARATVGIIAGGGFVEKPLLKAGNNYWKYRVRAVKWPVVRGVAMNAVSHPHGGGLHQSVSRPSTVSRNAPPGRKVGHI 227
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_METMA (50S ribosomal protein L2P OS=Methanosarcina mazei GN=rpl2p PE=3 SV=1) HSP 1 Score: 151.754 bits (382), Expect = 3.815e-36 Identity = 71/151 (47.02%), Postives = 99/151 (65.56%), Query Frame = 3 Query: 9 VYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 461 + CG A + GN++P+ ++PEG +CN+E D G R+SG YA +++H P T V +PSG K + CRA++G VAGGGR ++P LKAG YHK + + +P+V VAMNP +HP GGG +H G +TV R+APPG+KVGLI Sbjct: 81 IECGDDAEVKPGNIVPIGNVPEGFFICNIESKPNDGGKFVRSSGVYATVVTHEPTR--TAVSMPSGNIKWLNPKCRAVVGIVAGGGRVDRPWLKAGKKYHKMKTRAAKYPRVSAVAMNPRDHPFGGGAWKHPGKPTTVSRNAPPGRKVGLI 229
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL8_ENCCU (60S ribosomal protein L8 OS=Encephalitozoon cuniculi GN=RPL8 PE=3 SV=1) HSP 1 Score: 150.984 bits (380), Expect = 6.508e-36 Identity = 69/154 (44.81%), Postives = 105/154 (68.18%), Query Frame = 3 Query: 3 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV-RRDAPPGQKVGLI 461 Q + G A + +GN+ ++++PEG V +VE GD G A +G Y+++++H + + T +K+PSG K + S CR ++G VAGGG +KPLLKA A++K + + + +P+VRGVAMNPVEH HGGGNHQH+G +TV ++D QK+GL+ Sbjct: 72 QKILIGDDAPIDIGNITKIKNVPEGMAVNSVESVYGDGGTFAMVNGSYSLVVNHRKETNETVIKIPSGKKLTVSSECRCIVGVVAGGGIHDKPLLKASVAHYKAKARGHVFPRVRGVAMNPVEHIHGGGNHQHVGKPTTVSKKDISQEQKIGLV 225
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_PYRFU (50S ribosomal protein L2P OS=Pyrococcus furiosus GN=rpl2p PE=3 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 8.499e-36 Identity = 79/153 (51.63%), Postives = 94/153 (61.44%), Query Frame = 3 Query: 3 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 461 Q +Y G A + VGN LP+ IPEG V N+E GD G RA G YA+++S PD V+LPSG K CRA IG VAGGGR EKPL+KAG AY+K++ + WP RGV MN V HP GG H H G +T R APPG+KVG I Sbjct: 81 QEIYIGPDAPIAVGNTLPLAKIPEGTYVYNIEGIPGDGGKYVRAGGTYALVVSREPDK--VIVQLPSGELKAFNPMCRATIGVVAGGGRLEKPLVKAGKAYYKYKARNKFWPTPRGVKMNAVNHPFGGKEH-HPGKPTTTSRRAPPGRKVGHI 230
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_METS5 (50S ribosomal protein L2P OS=Metallosphaera sedula (strain ATCC 51363 / DSM 5348) GN=rpl2p PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.110e-35 Identity = 76/153 (49.67%), Postives = 96/153 (62.75%), Query Frame = 3 Query: 3 QFVYCGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 461 Q + G+ + +GN++P + +PEG V NVE H GD G AR +G YA+++ + R LPSG K I +G VAGGG EKPLLKAGN Y K++VK WP VRGVAMN V HPHGGG HQ + +STV R+ PPG+KVG I Sbjct: 77 QKIEVGEGSPASLGNIVPAKDLPEGVYVSNVELHRGDGGRYARTAGSYAIVVGKSEGKVILR--LPSGKIKEIDENALVTVGTVAGGGVLEKPLLKAGNNYWKYKVKATKWPDVRGVAMNVVSHPHGGGLHQSVSRSSTVARNTPPGRKVGHI 227
BLAST of CF832064 vs. ExPASy Swiss-Prot
Match: RL2_METLZ (50S ribosomal protein L2P OS=Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) GN=rpl2p PE=3 SV=1) HSP 1 Score: 150.214 bits (378), Expect = 1.110e-35 Identity = 74/148 (50.00%), Postives = 93/148 (62.84%), Query Frame = 3 Query: 18 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLI 461 G +AT++ GN LP+ +IP G VCN+E GD G R+SG AVII + V++PSG K C A +G VAGGGR +KP+LKAG YHK + WP+VRGVAMN ++HP GGG HQH G TV R A PG+KVG + Sbjct: 86 GPEATVVNGNSLPLSAIPTGVAVCNIEARPGDGGKFVRSSGVQAVIIGKSAGK--VGVRMPSGKPKWFNEACLATVGLVAGGGRIDKPILKAGKQYHKMKTSATRWPRVRGVAMNVIDHPFGGGGHQHPGKPKTVARGASPGRKVGSV 231 The following BLAST results are available for this feature:
BLAST of CF832064 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832064 ID=CF832064; Name=CF832064; organism=Citrus sinensis; type=EST; length=749bpback to top |