CF832066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RK2_CHLAT (50S ribosomal protein L2, chloroplastic OS=Chlorokybus atmophyticus GN=rpl2 PE=3 SV=2) HSP 1 Score: 85.1149 bits (209), Expect = 4.690e-16 Identity = 51/128 (39.84%), Postives = 67/128 (52.34%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G A L +GN LP+ IP G + N+E G G L RA+G A +++ + V+LPSG +++ C A IGQV + + KAG R W PKVRGV MNPV+HPHGGG Sbjct: 119 GPDAPLQLGNALPLSKIPLGTGIHNIEVSPGQGGKLVRAAGGVAQLVAK--EGSYVTVRLPSGEVRLVLKECSATIGQVGNVDASNVTIGKAG---------RKRWLGQRPKVRGVVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_THENN (50S ribosomal protein L2 OS=Thermotoga neapolitana (strain ATCC 49049 / DSM 4359 / NS-E) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 52/134 (38.81%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHAST 420 G A + GN LP+ IP G +V NVE G G +ARA+G Y I++ + D +++PSG + + C A +G V + KAG ++ +R P VRGVAMNPV+HPHGGG + GH T Sbjct: 120 GSDAEIKPGNALPLEKIPVGTLVHNVEFTPGKGGQIARAAGTYCQIMAK--EGDYALLRMPSGELRKVHIKCYATVGVVGNEDHKNEVHGKAGRV--RWLGRR---PHVRGVAMNPVDHPHGGGEGRGKGHHPT 246
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_SYMTH (50S ribosomal protein L2 OS=Symbiobacterium thermophilum GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 51/125 (40.80%), Postives = 70/125 (56.00%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYH-KFRVKRNCWPKVRGVAMNPVEHPHGGG 390 G A + VGN LP+ +IP G +V N+E + G G L R++G A I++ + ++LPSG ++ + CRA +GQV + KAG H FR P VRGV MNPV+HPHGGG Sbjct: 120 GPDADIKVGNALPLENIPVGTIVHNIELYPGRGGQLVRSAGASAQIMA--KEGRYALLRLPSGEQRKVLLACRATVGQVGNLEHENIVIGKAGRKRHLGFR------PAVRGVVMNPVDHPHGGG 236
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_SHEPW (50S ribosomal protein L2 OS=Shewanella piezotolerans (strain WP3 / JCM 13877) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 51/130 (39.23%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G A + GN +P+R+IP G+VV VE G +AR++G Y +I+ D ++L SG + +P CRA +G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 119 GIDAEIKSGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVIAR--DGAYATLRLRSGEMRKVPVDCRATLGEVGNAEHMLRQLGKAGA-----KRWRGVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_SHEHH (50S ribosomal protein L2 OS=Shewanella halifaxensis (strain HAW-EB4) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 51/130 (39.23%), Postives = 71/130 (54.62%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G A + GN +P+R+IP G+VV VE G +AR++G Y +I+ D ++L SG + +P CRA +G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 119 GIDAEIKSGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVIAR--DGAYATLRLRSGEMRKVPVDCRATLGEVGNAEHMLRQLGKAGA-----KRWRGVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_SHEB9 (50S ribosomal protein L2 OS=Shewanella baltica (strain OS195) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 119 GVAAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_SHEB8 (50S ribosomal protein L2 OS=Shewanella baltica (strain OS185) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 119 GVAAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_SHEB5 (50S ribosomal protein L2 OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 119 GVAAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_SHEB2 (50S ribosomal protein L2 OS=Shewanella baltica (strain OS223) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 50/130 (38.46%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G A + GN +P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 119 GVAAEIKTGNAMPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_PSEHT (50S ribosomal protein L2 OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 51/131 (38.93%), Postives = 72/131 (54.96%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G A + GN LP+R++P G+ V NVE G +AR++G Y I++ D ++L SG + + + CRA +G+V + L KAG N + R P VRGVAMNPV+HPHGGG + G Sbjct: 119 GVDAPIKPGNALPMRNMPVGSTVHNVELKPGKGAQIARSAGAYVQILAR--DGQYVTLRLRSGEVRKVEADCRATLGEVGNAEHMLRSLGKAGANRWRGIR------PTVRGVAMNPVDHPHGGGEGRTSG 241 The following BLAST results are available for this feature:
BLAST of CF832066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832066 ID=CF832066; Name=CF832066; organism=Citrus sinensis; type=EST; length=781bpback to top |