CF832066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_NITWN (50S ribosomal protein L2 OS=Nitrobacter winogradskyi (strain Nb-255 / ATCC 25391) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 48/130 (36.92%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G + GNV+P+ ++P G +V NVE +G G LAR++G YA I+ D D ++L SG ++++ CR IG V+ + KAG R N RGV MNP++HPHGGG + G Sbjct: 119 GNYVDVKPGNVMPLGNMPVGTIVHNVEMKIGKGGQLARSAGTYAQIVGR--DQDYVILRLNSGEQRLVHGRCRGAIGAVSNPDHMNTSVGKAGRTRWMGRRPHN-----RGVVMNPIDHPHGGGEGRTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_MYCH7 (50S ribosomal protein L2 OS=Mycoplasma hyopneumoniae (strain 7448) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 57/145 (39.31%), Postives = 74/145 (51.03%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHASTVRRDAPPGQK 450 G K+ ++VGN LP+ IPEG V N+E G L R++G +A I + D +KL SG + I + CRA IG V + + KAG HK P VRG MNP +HPHGGG Q IG S + P G+K Sbjct: 120 GPKSDILVGNALPLAKIPEGTFVHNIELKPGAGAKLIRSAGTWAQIQGRDEDGKYVILKLKSGEYRRILATCRATIGVVGNEENSLVNIGKAGRNRHK-----GIRPTVRGSVMNPNDHPHGGGEGKQPIGRKSPL---TPWGKK 256
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_MYCH2 (50S ribosomal protein L2 OS=Mycoplasma hyopneumoniae (strain 232) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 57/145 (39.31%), Postives = 74/145 (51.03%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHASTVRRDAPPGQK 450 G K+ ++VGN LP+ IPEG V N+E G L R++G +A I + D +KL SG + I + CRA IG V + + KAG HK P VRG MNP +HPHGGG Q IG S + P G+K Sbjct: 120 GPKSDILVGNALPLAKIPEGTFVHNIELKPGAGAKLIRSAGTWAQIQGRDEDGKYVILKLKSGEYRRILATCRATIGVVGNEENSLVNIGKAGRNRHK-----GIRPTVRGSVMNPNDHPHGGGEGKQPIGRKSPL---TPWGKK 256
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_METS4 (50S ribosomal protein L2 OS=Methylobacterium sp. (strain 4-46) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 48/134 (35.82%), Postives = 72/134 (53.73%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 408 G++ + GN +P+ ++P G +V NVE +G G LAR++G+YA I+ D ++L SG ++++ C A +G V+ L KAG R W P RGVAMNP++HPHGGG + G Sbjct: 120 GEQVDIKPGNAMPIGNMPVGTIVHNVELKIGKGGALARSAGNYAQIVGR--DQGYVTLRLNSGEQRLVHGQCYATVGAVSNPDHMNISLGKAG---------RKRWLGRRPHNRGVAMNPIDHPHGGGEGRTSG 242
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_METPB (50S ribosomal protein L2 OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 51/139 (36.69%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIGHASTV 423 G+ + GN P+ S+P G +V NVE +G G +AR++G+YA I+ D ++L SG ++++ C A +G V+ L KAG RN W P RGVAMNPV+HPHGGG + G + V Sbjct: 120 GESVDVKPGNAGPIGSMPVGTIVHNVELKIGKGGAIARSAGNYAQIVGR--DQGYVTLRLNSGEQRLVHGQCFASVGAVSNPDHMNISLGKAG---------RNRWLGKRPHNRGVAMNPVDHPHGGGEGRTSGGRNPV 247
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_METI4 (50S ribosomal protein L2 OS=Methylacidiphilum infernorum (isolate V4) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 55/144 (38.19%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW-PKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQ 447 G A VGN LP+++IP G + N+E G G L R++G A ++ D + VKLPSG + + + C A +GQV+ K L KAG R + W P+VRGVAMNPV+HP+GGG + G + ++P G+ Sbjct: 119 GPDAPPEVGNSLPLKNIPSGLPIYNIELVPGKGGQLVRSAGSSARMMGL--DKEYAIVKLPSGEIRKVCAECYATVGQVSNPDHFNKSLGKAG------RTRWLGWRPRVRGVAMNPVDHPNGGGQGKSKGGGGWQQLESPWGK 254
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_FRATO (50S ribosomal protein L2 OS=Francisella tularensis subsp. holarctica (strain OSU18) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 120 GEKVDIAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_FRATH (50S ribosomal protein L2 OS=Francisella tularensis subsp. holarctica (strain LVS) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 120 GEKVDIAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_FRATF (50S ribosomal protein L2 OS=Francisella tularensis subsp. holarctica (strain FTNF002-00 / FTA) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 120 GEKVDIAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_FRAP2 (50S ribosomal protein L2 OS=Francisella philomiragia subsp. philomiragia (strain ATCC 25017) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 51/134 (38.06%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 7 SCTVGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 S G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 116 SVVSGEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242 The following BLAST results are available for this feature:
BLAST of CF832066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832066 ID=CF832066; Name=CF832066; organism=Citrus sinensis; type=EST; length=781bpback to top |