CF832066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACC2 (50S ribosomal protein L2 OS=Bacillus cereus (strain G9842) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 52/128 (40.62%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA IGQV G + L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 119 GPEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRASIGQV---GNEQHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_ALCBS (50S ribosomal protein L2 OS=Alcanivorax borkumensis (strain SK2 / ATCC 700651 / DSM 11573) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 48/130 (36.92%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G+ A + +GN LP+R+IP G+ + NVE G G +AR++G +++ D ++L SG + + + C+A IG+V+ + + L KAG + R P VRG AMNPV+HPHGGG + G Sbjct: 119 GEDAPIKLGNALPLRNIPLGSTIHNVEMKPGKGGQIARSAGTSVQLLA--KDGQYVTLRLRSGEMRKVHADCKATIGEVSNSEHSLRSLGKAG-----AKRWRGVRPTVRGAAMNPVDHPHGGGEGRSSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_AERS4 (50S ribosomal protein L2 OS=Aeromonas salmonicida (strain A449) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 56/145 (38.62%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 450 G A + VGN LP+R+IP G+ V VE G LAR++G + I++ + T R++ SG + + + CRA IG+V + L KAG N + R P VRG+AMNPV+HPHGGG ++ G ++ +P GQK Sbjct: 119 GADAAIKVGNTLPMRNIPVGSTVHAVEMKPGKGAQLARSAGTFIQILAREGNYVTLRLR--SGEVRKVLAECRATIGEVGNSEHMLRQLGKAGANRWRGIR------PTVRGMAMNPVDHPHGGGEGRNKG----MQPVSPWGQK 251
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_AERHH (50S ribosomal protein L2 OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / NCIB 9240) GN=rplB PE=3 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 6.126e-16 Identity = 56/145 (38.62%), Postives = 81/145 (55.86%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 450 G A + VGN LP+R+IP G+ V VE G LAR++G + I++ + T R++ SG + + + CRA IG+V + L KAG N + R P VRG+AMNPV+HPHGGG ++ G ++ +P GQK Sbjct: 119 GADAAIKVGNTLPMRNIPVGSTVHAVEMKPGKGAQLARSAGTFIQILAREGNYVTLRLR--SGEVRKVLAECRATIGEVGNSEHMLRQLGKAGANRWRGIR------PTVRGMAMNPVDHPHGGGEGRNKG----MQPVSPWGQK 251
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RM02_RECAM (60S ribosomal protein L2, mitochondrial OS=Reclinomonas americana GN=RPL2 PE=3 SV=2) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 50/135 (37.04%), Postives = 78/135 (57.78%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTV 423 G + +GN LP+R+IP G ++ N+E + G G + R++G A +IS + +N +KLPSG ++ P+ A IG ++ + KAG + ++ +R P VRGVAMNPV+HPHGGG + G +V Sbjct: 119 GNDIDIRIGNTLPLRNIPIGTMIHNIELNPGKGGKIVRSAGSSAQLISKD-ENGFCMLKLPSGEYRLFPNNSLATIGILSNIDNKNIKIGKAGRS--RWMGRR---PIVRGVAMNPVDHPHGGGEGKTSGGRPSV 247
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_SYNJB (50S ribosomal protein L2 OS=Synechococcus sp. GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 51/129 (39.53%), Postives = 72/129 (55.81%), Query Frame = 1 Query: 4 SSCTVGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 390 S+ G +A +GN +P+ IP G VV NVE + G G + RA+G A +++ + +KLPSG ++I C A IGQ+ L KAG + ++ +R PKVRG MNPV+HPHGGG Sbjct: 120 STIMAGPEAPFEIGNAMPLERIPLGTVVHNVELYPGRGGQMVRAAGAGAQVVAR--EGKYVSLKLPSGEVRMIRGECYATIGQLGNVDHNNISLGKAGRS--RWLGRR---PKVRGSVMNPVDHPHGGG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_POLSJ (50S ribosomal protein L2 OS=Polaromonas sp. (strain JS666 / ATCC BAA-500) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 50/126 (39.68%), Postives = 73/126 (57.94%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKR--NCWPKVRGVAMNPVEHPHGGG 390 G +A + VGN LP+R+IP G+ + +E +G +AR++G A +++ + +V++ SG + I CRA IG+VA + + L KAG VKR P VRGV MNPV+HPHGGG Sbjct: 119 GSEAPIRVGNTLPIRNIPVGSTIHCIEMQIGKGAQIARSAGTSATLLAR--EGTYAQVRMRSGEVRKIHIECRATIGEVANEEHSLRRLGKAG-------VKRWMGIRPTVRGVVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_POLNA (50S ribosomal protein L2 OS=Polaromonas naphthalenivorans (strain CJ2) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 50/126 (39.68%), Postives = 73/126 (57.94%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKR--NCWPKVRGVAMNPVEHPHGGG 390 G +A + VGN LP+R+IP G+ + +E +G +AR++G A +++ + +V++ SG + I CRA IG+VA + + L KAG VKR P VRGV MNPV+HPHGGG Sbjct: 119 GSEAPIRVGNTLPIRNIPVGSTIHCIEMQIGKGAQIARSAGTSATLLAR--EGTYAQVRMRSGEVRKIHIECRATIGEVANEEHSLRRLGKAG-------VKRWMGIRPTVRGVVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_OCEIH (50S ribosomal protein L2 OS=Oceanobacillus iheyensis GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 53/128 (41.41%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G+ A + +GN LP+ SIP G V+ N+E G G +AR++G A I+ + T V+L SG ++I + CRA IGQV G E L++ G A R+ W P VRG MNP +HPHGGG Sbjct: 119 GENADIKLGNALPLGSIPVGTVIHNIELKPGRGGQIARSAGAEAQILGR--EEKYTLVRLSSGEVRLILTTCRATIGQV---GNIEHELVRVGKA------GRSRWKGIRPTVRGSVMNPNDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_FRATW (50S ribosomal protein L2 OS=Francisella tularensis subsp. tularensis (strain WY96-3418) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 120 GEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242 The following BLAST results are available for this feature:
BLAST of CF832066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832066 ID=CF832066; Name=CF832066; organism=Citrus sinensis; type=EST; length=781bpback to top |