CF832066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_FRATT (50S ribosomal protein L2 OS=Francisella tularensis subsp. tularensis GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 120 GEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_FRATN (50S ribosomal protein L2 OS=Francisella tularensis subsp. novicida (strain U112) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 120 GEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_FRATM (50S ribosomal protein L2 OS=Francisella tularensis subsp. mediasiatica (strain FSC147) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 120 GEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_FRAT1 (50S ribosomal protein L2 OS=Francisella tularensis subsp. tularensis (strain FSC 198) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 50/130 (38.46%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G+K + VGN +P+R+IP G V+ N+E + R++G +A ++ DN ++L SG + + CRA+IG V+ K L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 120 GEKVDVAVGNCMPLRNIPLGTVIHNIEMKPKKGAQMIRSAGTFAQLVGK--DNAYAIIRLRSGEMRRVLLDCRAVIGVVSNSEHNLKSLGKAGA-----KRWRGIRPTVRGVAMNPVDHPHGGGEGRTSG 242
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_DESAA (50S ribosomal protein L2 OS=Desulfatibacillum alkenivorans (strain AK-01) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 51/130 (39.23%), Postives = 72/130 (55.38%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G +A + GN LP+ +IP G + N+E VG G + R +G +A +++ + +V+LPSG +++ C A IGQV G E L G A K + R P VRGVAMNPV+HP GGG + G Sbjct: 119 GPEADIKPGNALPLNNIPLGTQIHNIELKVGKGGQVVRGAGTFAQLVA--KEGKYAQVRLPSGEVRLVLLKCMATIGQV---GNVEHENLALGKAGRKRWLGRR--PSVRGVAMNPVDHPMGGGEGRSSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_CLOPH (50S ribosomal protein L2 OS=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 49/124 (39.52%), Postives = 67/124 (54.03%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 390 G A + VGN LP+ +IP G+ + N+E + G G L R++G+ A +++ T R LPSG +++P CRA +GQV L KAG H P VRG MNP +HPHGGG Sbjct: 119 GATAEIKVGNCLPLANIPVGSQIHNIELYPGKGGQLVRSAGNSAQLMAREGKYATLR--LPSGEMRMVPISCRATLGQVGNIDHELVTLGKAGRVRH-----MGIRPTVRGSVMNPNDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_CLOBK (50S ribosomal protein L2 OS=Clostridium botulinum (strain Okra / Type B1) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 52/134 (38.81%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHAS 417 G ++ + VGN LP+R+IP G V+ N+E G L R++G+ A +++ + D ++V+LPSG + I CRA IG V+ + KAG H P VRG MNP +HPHGGG IGH S Sbjct: 119 GPESDIKVGNCLPIRNIPVGTVIHNIELAPGKGAQLVRSAGNSAQLMA--KEGDYSQVRLPSGEVRYIRVECRATIGVVSNQTNEIVNIGKAGRKRH-----MGVRPTVRGSVMNPNDHPHGGGEGRSPIGHPS 245
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_CHLSY (50S ribosomal protein L2 OS=Chloroflexus aurantiacus (strain ATCC 29364 / DSM 637 / Y-400-fl) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 50/124 (40.32%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 390 G A + VGN LP+ +IP G + N+E +G GVL R++G A +++ + D V++PSG ++I C A IGQV L KAG + ++ +R P+VRG AMNP +HPHGGG Sbjct: 119 GPDAEIRVGNALPLSAIPLGTQIHNIELEIGRGGVLVRSAGTAAQLMA--KEGDYAIVRMPSGEMRMIHLRCMATIGQVGNVDHQNIRLGKAGRS--RWLGRR---PRVRGAAMNPRDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_CHLAA (50S ribosomal protein L2 OS=Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 50/124 (40.32%), Postives = 72/124 (58.06%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 390 G A + VGN LP+ +IP G + N+E +G GVL R++G A +++ + D V++PSG ++I C A IGQV L KAG + ++ +R P+VRG AMNP +HPHGGG Sbjct: 119 GPDAEIRVGNALPLSAIPLGTQIHNIELEIGRGGVLVRSAGTAAQLMA--KEGDYAIVRMPSGEMRMIHLRCMATIGQVGNVDHQNIRLGKAGRS--RWLGRR---PRVRGAAMNPRDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BART1 (50S ribosomal protein L2 OS=Bartonella tribocorum (strain CIP 105476 / IBS 506) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 49/134 (36.57%), Postives = 75/134 (55.97%), Query Frame = 1 Query: 7 SCTVGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 S G + GN +P+ ++P G ++ NVE G G +AR++G YA ++ D+ ++L SG ++++ S C A +G V+ KAG + ++R KR P VRGVAMNPV+HPHGGG + G Sbjct: 115 SVVAGSNVDVKPGNAMPLGNMPVGTIIHNVEMKPGKGGQIARSAGAYAQLVGR--DHGMAILRLNSGEQRLVSSSCFATVGAVSNPDHGNINDGKAGRS--RWRGKR---PHVRGVAMNPVDHPHGGGEGRTSG 241 The following BLAST results are available for this feature:
BLAST of CF832066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832066 ID=CF832066; Name=CF832066; organism=Citrus sinensis; type=EST; length=781bpback to top |