CF832066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_ACIC5 (50S ribosomal protein L2 OS=Acidobacterium capsulatum (strain ATCC 51196 / DSM 11244 / JCM 7670) GN=rplB PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 51/134 (38.06%), Postives = 70/134 (52.24%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 408 G +A ++VGN LP+++IP G V NVE G + R++G A +++ + D +KLPSG + + C A IGQV + KAG RN W P RGV MNPV+HPHGGG + G Sbjct: 119 GPEADILVGNALPLKNIPAGTTVHNVELRPGKGAQMVRSAGASAQLVA--KEGDYALLKLPSGETRRVLINCMATIGQVGNTDHENVSIGKAG---------RNRWKGIRPTNRGVTMNPVDHPHGGGEGKTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RK2_PIPCE (50S ribosomal protein L2, chloroplastic OS=Piper cenocladum GN=rpl2-A PE=3 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 8.000e-16 Identity = 49/128 (38.28%), Postives = 69/128 (53.91%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G + + +GN LP+ +P G + N+E + G LARA+G + +I+ + T R LPSG ++I C A +GQV +K L +AG+ CW P VRGV MNPV+HPHGGG Sbjct: 117 GTEVPISMGNALPLTDMPLGTAIHNIEITLEKGGQLARAAGAVSKLIAKEGKSATLR--LPSGEVRLISKNCSATVGQVGNVEVNQKSLGRAGS---------KCWLGKRPVVRGVVMNPVDHPHGGG 233
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_NEIMF (50S ribosomal protein L2 OS=Neisseria meningitidis serogroup C / serotype 2a (strain ATCC 700532 / FAM18) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15 Identity = 50/125 (40.00%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 390 G +A + VGN LP+R+IP G + +E G +AR++G AV+++ + +V+L SG + I CRA IG+V ++ K + KAG N + R P VRGV MNPV+HPHGGG Sbjct: 119 GAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLA--KEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIR------PTVRGVVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_NEIMA (50S ribosomal protein L2 OS=Neisseria meningitidis serogroup A GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15 Identity = 50/125 (40.00%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 390 G +A + VGN LP+R+IP G + +E G +AR++G AV+++ + +V+L SG + I CRA IG+V ++ K + KAG N + R P VRGV MNPV+HPHGGG Sbjct: 119 GAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLA--KEGAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIR------PTVRGVVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_CAUCR (50S ribosomal protein L2 OS=Caulobacter crescentus GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15 Identity = 50/143 (34.97%), Postives = 74/143 (51.75%), Query Frame = 1 Query: 22 KKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 450 +K + GN P+R++P G ++ N+E G +AR++G YA ++ D +++L SG +++ C A +G V+ + L KAG + H R P VRGVAMNPV+HPHGGG G S R P K Sbjct: 120 EKVDVKPGNASPLRTLPIGTIIHNIELKPAKGGQIARSAGAYAQLVGR--DAGYAQIRLNSGELRMVLDTCMATVGAVSNPDHMNQNLGKAGRSRHMGRR-----PHVRGVAMNPVDHPHGGGE----GRTSGGRHPVTPAGK 251
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_CAUCN (50S ribosomal protein L2 OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15 Identity = 50/143 (34.97%), Postives = 74/143 (51.75%), Query Frame = 1 Query: 22 KKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 450 +K + GN P+R++P G ++ N+E G +AR++G YA ++ D +++L SG +++ C A +G V+ + L KAG + H R P VRGVAMNPV+HPHGGG G S R P K Sbjct: 120 EKVDVKPGNASPLRTLPIGTIIHNIELKPAKGGQIARSAGAYAQLVGR--DAGYAQIRLNSGELRMVLDTCMATVGAVSNPDHMNQNLGKAGRSRHMGRR-----PHVRGVAMNPVDHPHGGGE----GRTSGGRHPVTPAGK 251
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BARBK (50S ribosomal protein L2 OS=Bartonella bacilliformis (strain ATCC 35685 / KC583) GN=rplB1 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15 Identity = 50/130 (38.46%), Postives = 74/130 (56.92%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G + GN +P+ ++P GA+V NVE G G +AR++G YA ++ D ++L SG ++++ S C A +G V+ KAG + ++R KR P VRGVAMNPV+HPHGGG + G Sbjct: 119 GLSVDVKPGNAMPLGNMPVGAIVHNVEMKPGKGGQIARSAGAYAQLVGR--DQGMAILRLNSGEQRLVSSNCFATVGAVSNPDHGNINDGKAGRS--RWRGKR---PHVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACHD (50S ribosomal protein L2 OS=Bacillus halodurans GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15 Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G +A + VGN LP+++IP G V+ N+E G G L R++G A ++ + D V+L SG + I + CRA IGQV G E L+ G A R+ W P VRG AMNP +HPHGGG Sbjct: 119 GPEADIKVGNALPLKNIPVGTVIHNIELKPGKGGQLVRSAGAEAQLL--GKEGDYVLVRLNSGETRYILATCRATIGQV---GNLEHELVNIGKA------GRSRWLGKRPTVRGSAMNPNDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_ANAVT (50S ribosomal protein L2 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15 Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G ++ + GN LP+ +IP G V NVE G G + R++G A +++ + + +KLPSG ++I C A IGQV G T+ L AG A RN W PKVRG MNPV+HPHGGG Sbjct: 119 GPESPIEDGNALPLANIPLGTSVHNVELKAGKGGQIVRSAGATAQVVAK--EGNYVTLKLPSGEVRLIRRECYATIGQV---GNTDARNLSAGKA------GRNRWKGRRPKVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_ANASP (50S ribosomal protein L2 OS=Anabaena sp. (strain PCC 7120) GN=rplB PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 1.045e-15 Identity = 53/128 (41.41%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G ++ + GN LP+ +IP G V NVE G G + R++G A +++ + + +KLPSG ++I C A IGQV G T+ L AG A RN W PKVRG MNPV+HPHGGG Sbjct: 119 GPESPIEDGNALPLANIPLGTSVHNVELKAGKGGQIVRSAGATAQVVAK--EGNYVTLKLPSGEVRLIRRECYATIGQV---GNTDARNLSAGKA------GRNRWKGRRPKVRGSVMNPVDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of CF832066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832066 ID=CF832066; Name=CF832066; organism=Citrus sinensis; type=EST; length=781bpback to top |