CF832066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_NEIG1 (50S ribosomal protein L2 OS=Neisseria gonorrhoeae (strain ATCC 700825 / FA 1090) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 50/125 (40.00%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 390 G +A + VGN LP+R+IP G + +E G +AR++G AV+++ + +V+L SG + I CRA IG+V ++ K + KAG N + R P VRGV MNPV+HPHGGG Sbjct: 119 GAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLA--KEGAYAQVRLRSGEVRKINVDCRATIGEVGNEEQSLKKIGKAGANRWRGIR------PTVRGVVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_CYAP4 (50S ribosomal protein L2 OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 52/128 (40.62%), Postives = 66/128 (51.56%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G A + VGN LP+ IP G V NVE G G + RA+G A +++ + D +KLPSG ++ C A IGQ+ + KAG RN W PKVRG MNPV+HPHGGG Sbjct: 119 GPDAAIEVGNALPLSKIPLGTGVHNVEITPGRGGQMVRAAGAMAQVVA--KEGDMVTLKLPSGEVRLFRKECYATIGQIGNVDVNNISIGKAG---------RNRWKGRRPKVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_CELJU (50S ribosomal protein L2 OS=Cellvibrio japonicus (strain Ueda107) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 54/132 (40.91%), Postives = 73/132 (55.30%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKR--NCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G A + VGN LPVR+IP G+V+ VE G LAR++G A +++ D ++L SG + + S CRA +G+V+ + L KAG KR P VRGVAMNPV+HPHGGG + G Sbjct: 119 GNAAAIKVGNTLPVRNIPLGSVIHCVELKPGKGAQLARSAGASAQLVA--KDGAYVTLRLRSGEMRKVLSDCRATLGEVSNTEHNLRSLGKAG-------AKRWLGIRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_CAUSK (50S ribosomal protein L2 OS=Caulobacter sp. (strain K31) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 49/139 (35.25%), Postives = 73/139 (52.52%), Query Frame = 1 Query: 25 KATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPP 441 K + GN P+R++P G ++ NVE G +AR++G YA ++ D +++L SG +++ C A +G V+ + + L KAG H R P VRGVAMNPV+HPHGGG + G + V P Sbjct: 121 KVDVKPGNTSPLRTMPIGTIIHNVELKPAKGGQIARSAGAYAQLVGR--DAGYAQIRLNSGELRMVLDTCLATVGAVSNPDHSNQNLGKAGRVRHMGRR-----PHVRGVAMNPVDHPHGGGEGRTSGGRNPVTPAGKP 252
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BEUC1 (50S ribosomal protein L2 OS=Beutenbergia cavernae (strain ATCC BAA-8 / DSM 12333 / NBRC 16432) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 54/146 (36.99%), Postives = 80/146 (54.79%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVG 456 G A + GN LP+R+IP G V+ VE G +AR++G +++ D ++++PSG + + + CRA IG+V ++ KAG +++ KR P VRGVAMNPV+HPHGGG + G V +P GQ G Sbjct: 120 GPAADIKPGNNLPLRNIPTGTVIHAVELRPGGGAKIARSAGSSVQLVAK--DGPYAQLRMPSGEIRNVDARCRATIGEVGNAEQSNINWGKAGRM--RWKGKR---PSVRGVAMNPVDHPHGGGEGKTSGGRHPV---SPWGQPEG 255
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACWK (50S ribosomal protein L2 OS=Bacillus weihenstephanensis (strain KBAB4) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 51/128 (39.84%), Postives = 71/128 (55.47%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G ++ + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA IGQV G + L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 119 GPESDIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRASIGQV---GNEQHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACHK (50S ribosomal protein L2 OS=Bacillus thuringiensis subsp. konkukian GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 119 GAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACCZ (50S ribosomal protein L2 OS=Bacillus cereus (strain ZK / E33L) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 119 GAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACCQ (50S ribosomal protein L2 OS=Bacillus cereus (strain Q1) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 119 GAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRAAVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACC7 (50S ribosomal protein L2 OS=Bacillus cereus (strain AH187) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 119 GAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of CF832066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832066 ID=CF832066; Name=CF832066; organism=Citrus sinensis; type=EST; length=781bpback to top |