CF832066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACC3 (50S ribosomal protein L2 OS=Bacillus cereus (strain 03BB102) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 119 GAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACC1 (50S ribosomal protein L2 OS=Bacillus cereus (strain ATCC 10987) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 119 GAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACC0 (50S ribosomal protein L2 OS=Bacillus cereus (strain AH820) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 119 GAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACAN (50S ribosomal protein L2 OS=Bacillus anthracis GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 119 GAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACAH (50S ribosomal protein L2 OS=Bacillus thuringiensis (strain Al Hakam) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 119 GAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACAC (50S ribosomal protein L2 OS=Bacillus anthracis (strain CDC 684 / NRRL 3495) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 119 GAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_BACAA (50S ribosomal protein L2 OS=Bacillus anthracis (strain A0248) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 51/128 (39.84%), Postives = 70/128 (54.69%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGG 390 G +A + +GN LP+ +IP G VV N+E G G L R++G A ++ + V+L SG +++ S CRA +GQV G L+K G A R+ W P VRG MNPV+HPHGGG Sbjct: 119 GAEADIKIGNALPLINIPVGTVVHNIELKPGRGGQLVRSAGTSAQVL--GKEGKYVLVRLTSGEVRLVLSACRATVGQV---GNESHELIKIGKA------GRSRWLGKRPTVRGSVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_ACIBL (50S ribosomal protein L2 OS=Acidobacteria bacterium (strain Ellin345) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 52/134 (38.81%), Postives = 71/134 (52.99%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 408 G A ++VGN LP+R+IP G VV N+E G +AR++G A +++ ++D +KLPSG + + C A IGQV + KAG R W P RGV MNPV+HPHGGG + G Sbjct: 119 GPDADILVGNALPLRNIPAGTVVHNIELKPGKGAQMARSAGAQAQLVA--KESDYALLKLPSGETRRVLVDCMATIGQVGNLDYENVAIGKAG---------RTRWMGVRPTNRGVVMNPVDHPHGGGEGKTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_ACIAD (50S ribosomal protein L2 OS=Acinetobacter sp. (strain ADP1) GN=rplB PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 54/144 (37.50%), Postives = 79/144 (54.86%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQK 450 G A + GN LP+R++P G+ + NVE +G LAR++G ++ D V+L SG + I CRA+IG+V+ + L KAG + R P VRG+AMNPV+HPHGGG ++ G ++ +P GQK Sbjct: 119 GNDAPIRPGNCLPLRNMPIGSTLHNVELKIGKGAQLARSAGTSVQLLGR--DGSYAIVRLRSGEMRKIHVECRAVIGEVSNQENNLRSLGKAGASRW-----RGVRPTVRGMAMNPVDHPHGGGEGRNKG----IQPVSPWGQK 251
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RK2_PSEAK (50S ribosomal protein L2, chloroplastic OS=Pseudendoclonium akinetum GN=rpl2 PE=3 SV=1) HSP 1 Score: 83.5741 bits (205), Expect = 1.365e-15 Identity = 49/122 (40.16%), Postives = 72/122 (59.02%), Query Frame = 1 Query: 25 KATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 390 +A +++GN LP+++IP G V NVE + G G L+RA+G A I++ + ++LPSG +++ C A IGQV G + ++ G A + R PKVRGV MNP +HPHGGG Sbjct: 121 EAPILIGNCLPLKAIPLGTEVHNVELYSGMGGQLSRAAGSSAQIVA--KEGRFVTLRLPSGEVRLVSQNCWATIGQV---GNVDANNIRIGKAGRMRWLGRR--PKVRGVVMNPNDHPHGGG 235 The following BLAST results are available for this feature:
BLAST of CF832066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832066 ID=CF832066; Name=CF832066; organism=Citrus sinensis; type=EST; length=781bpback to top |