CF832066
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_SHEPA (50S ribosomal protein L2 OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15 Identity = 51/130 (39.23%), Postives = 70/130 (53.85%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G A + GN LP+R+IP G+VV VE +AR++G Y +I+ D ++L SG + +P CRA +G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 119 GIDAEIKSGNALPLRNIPVGSVVHAVEMKPAKGAQIARSAGAYVQVIAR--DGAYATLRLRSGEMRKVPVDCRATLGEVGNAEHMLRQLGKAGA-----KRWRGVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_SHEFN (50S ribosomal protein L2 OS=Shewanella frigidimarina (strain NCIMB 400) GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15 Identity = 50/130 (38.46%), Postives = 69/130 (53.08%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 G A + GN P+R+IP G+VV VE G +AR++G Y +++ D ++L SG + +P CRA G+V + L KAG + R P VRGVAMNPV+HPHGGG + G Sbjct: 119 GLDAEIKTGNARPLRNIPVGSVVHAVEMKPGKGAQIARSAGAYVQVVAR--DGAYATLRLRSGEMRKVPVDCRATFGEVGNAEHMLRQLGKAGA-----KRWRGVRPTVRGVAMNPVDHPHGGGEGRTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_RHOPB (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisB18) GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15 Identity = 47/122 (38.52%), Postives = 69/122 (56.56%), Query Frame = 1 Query: 43 GNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIG 408 GNV+P+ ++P G +V NVE +G G +AR++G YA ++ D+D V+L SG ++++ C A IG V+ + KAG + R N RGV MNPV+HPHGGG + G Sbjct: 127 GNVMPLGNMPIGTIVHNVELKIGKGGQIARSAGTYAQLVGR--DHDYVIVRLNSGEQRLVHGRCTATIGAVSNPDHMNISIGKAGRSRWLGRKPHN-----RGVTMNPVDHPHGGGEGRTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_RHOP5 (50S ribosomal protein L2 OS=Rhodopseudomonas palustris (strain BisA53) GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15 Identity = 48/123 (39.02%), Postives = 70/123 (56.91%), Query Frame = 1 Query: 43 GNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW-PKVRGVAMNPVEHPHGGGNHQHIG 408 GNV+P+ ++P G +V NVE +G G +AR++G YA ++ D+D V+L SG +++I C A IG V+ + KAG R + W P RGV MNP++HPHGGG + G Sbjct: 127 GNVMPLGNMPIGTIVHNVEMKIGKGGQIARSAGTYAQLVGR--DHDYVIVRLNSGEQRLIHGRCTATIGAVSNPDHMNISIGKAG------RTRWLGWRPHNRGVVMNPIDHPHGGGEGRTSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_RHOFD (50S ribosomal protein L2 OS=Rhodoferax ferrireducens (strain DSM 15236 / ATCC BAA-621 / T118) GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15 Identity = 49/129 (37.98%), Postives = 73/129 (56.59%), Query Frame = 1 Query: 4 SSCTVGKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 390 +S G +A + VGN LP+R+IP G++V +E +G + R++G A +++ + +V++ SG + I CRA +GQVA + + L KAG K P VRGV MNPV+HPHGGG Sbjct: 114 ASIMSGAEAPIRVGNTLPIRNIPVGSIVHCIELQIGKGAQIVRSAGTSATLLAR--EGIYAQVRMRSGEVRKIHIECRATLGQVANEEHSLRRLGKAGAKRWK-----GIRPTVRGVVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_NEIM0 (50S ribosomal protein L2 OS=Neisseria meningitidis serogroup C (strain 053442) GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15 Identity = 50/125 (40.00%), Postives = 72/125 (57.60%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAG-NAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG 390 G +A + VGN LP+R+IP G + +E G +AR++G AV+++ + +V+L SG + I CRA IG+V ++ K + KAG N + R P VRGV MNPV+HPHGGG Sbjct: 119 GAEAAIKVGNTLPIRNIPVGTTIHCIEMKPGKGAQIARSAGASAVLLA--KEAAYAQVRLRSGEVRKINVNCRATIGEVGNEEQSLKKIGKAGANRWRGIR------PTVRGVVMNPVDHPHGGG 235
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_MYCPU (50S ribosomal protein L2 OS=Mycoplasma pulmonis GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15 Identity = 52/145 (35.86%), Postives = 75/145 (51.72%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGG-NHQHIGHASTVRRDAPPGQK 450 G+ ++VGN L + +IPEG + N+E G+LAR++G YA I+ ++L SG + + + CRA IG V + + KAG HK P VRG MNP++HPHGGG Q IG + + P G+K Sbjct: 120 GENVDIIVGNSLELANIPEGTNIHNIELQPKGGGILARSAGSYAQILGKEESGKYVLIRLKSGEVRKVFAKCRATIGIVGNEEHSLVNIGKAGRNRHK-----GIRPTVRGSVMNPIDHPHGGGEGKQPIGRKAPL---TPWGKK 256
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_DESAD (50S ribosomal protein L2 OS=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15 Identity = 51/134 (38.06%), Postives = 73/134 (54.48%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 408 G+KA + GN L +++IP G +V N+E + G G RA+G YA +I+ + +++PSG + + + C A +GQV L KAG RN W PKVRGVAMNP++HP GGG + G Sbjct: 119 GEKADIKPGNALLLKNIPVGTIVHNIELYPGKGGQFCRAAGTYAQLIA--KEGKYALLRMPSGEVRKVLATCCATVGQVGNIHHENITLGKAG---------RNRWLGRRPKVRGVAMNPIDHPLGGGEGRSSG 241
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_CLOTH (50S ribosomal protein L2 OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15 Identity = 51/140 (36.43%), Postives = 75/140 (53.57%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQH-IGHASTV 423 G+ A + GN LP+ +IP G + N+E G G L R++G+ A +++ + + +++LPSG +++ C+A IGQV + KAG R W P VRGV MNPV+HPHGGG + IG S V Sbjct: 119 GENADIKPGNALPLENIPVGTEIHNIELKPGKGGQLVRSAGNVAQLMAK--EGNYAQIRLPSGEVRMVSLKCKATIGQVGNIDHENVSIGKAG---------RKRWMGIRPTVRGVVMNPVDHPHGGGEGKSPIGRPSPV 247
BLAST of CF832066 vs. ExPASy Swiss-Prot
Match: RL2_AZOC5 (50S ribosomal protein L2 OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571) GN=rplB PE=3 SV=1) HSP 1 Score: 83.1889 bits (204), Expect = 1.782e-15 Identity = 49/134 (36.57%), Postives = 70/134 (52.24%), Query Frame = 1 Query: 19 GKKATLMVGNVLPVRSIPEGAVVCNVEHHVGDRGVLARASGDYAVIISHNPDNDTTRVKLPSGAKKIIPSGCRAMIGQVAGGGRTEKPLLKAGNAYHKFRVKRNCW----PKVRGVAMNPVEHPHGGGNHQHIG 408 G++ + GN P+ ++P G +V NVE +G G +AR++G YA I+ D V+L SG +++I C A +G V+ L KAG R+ W P RGV MNPV+HPHGGG + G Sbjct: 119 GEQVDVKPGNAAPLSNLPVGTIVHNVEMKIGKGGQIARSAGSYAQIVGR--DQGYVIVRLNSGEQRLIHGACYATVGAVSNPDHMNTSLGKAG---------RSRWLGVKPHNRGVTMNPVDHPHGGGEGRTSG 241 The following BLAST results are available for this feature:
BLAST of CF832066 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >CF832066 ID=CF832066; Name=CF832066; organism=Citrus sinensis; type=EST; length=781bpback to top |