CF832095

Overview
NameCF832095
Unique NameCF832095
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length462
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig1198 contig Csv1_Contig1198:209..670. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832095 vs. ExPASy Swiss-Prot
Match: RL29_SCHPO (60S ribosomal protein L29 OS=Schizosaccharomyces pombe GN=rpl29 PE=2 SV=3)

HSP 1 Score: 70.8626 bits (172), Expect = 3.002e-12
Identity = 31/48 (64.58%), Postives = 39/48 (81.25%), Query Frame = -2 
Query:  276 MAKSKNHTAHNQSYKAHKNGIKKPKKHRHTSTKGMDPKFLRNQRYARK 419
            MAKSKNHT HNQ+ KAH+NGIK+P+KHR+ S K  D KF RNQ++A +
Sbjct:    1 MAKSKNHTNHNQNKKAHRNGIKRPQKHRYDSLKYRDAKFRRNQKFANR 48
The following BLAST results are available for this feature:
BLAST of CF832095 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 11
Match NameE-valueIdentityDescription
RL29_SCHPO3.002e-1264.5860S ribosomal protein L29 OS=Schizosaccharomyces p... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01E22_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01E22, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832095 ID=CF832095; Name=CF832095; organism=Citrus sinensis; type=EST; length=462bp
TTTTTTTTTTTTTTTTTAAGCTTCATAATAAGGAAATAGAATTCACACTT
TAATAATCTTTAGCAATTATCACATCAGTAAACAAACATAGCTTAACGAT
TCAGCAGATACTTGAAATTGAAATGAAACCCACTAGAGTGCCATCAAATC
ACTACAATAACAAAAACAAAACAGATATCCATTCAAGGGGTAAAAAAAAT
CTTAACAACTAAGTAATTAAAACCCCATAACAGCATCTACTCCTCGGCAG
CAGATTCACCTCCTTGCTTGTTATGCTTCCTTGCATACCTCTGGTTCCTA
AGGAACTTTGGGTCCATCCCTTTGGTGGAAGTGTGGCGGTGCTTCTTAGG
TTTCTTGATACCGTTCTTGTGAGCCTTGTAAGACTGGTTATGCGCTGTGT
GATTCTTTGACTTTGCCATCTCGTTTTCAGGAAAAGACCCTGCTCGCGGC
TGTGCTAGAGCC
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