CF832146

Overview
NameCF832146
Unique NameCF832146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10427 contig Csv1_Contig10427:1093..1922. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: RENI_CANFA (Renin OS=Canis familiaris GN=REN PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.427e-13
Identity = 35/86 (40.70%), Postives = 53/86 (61.63%), Query Frame = -3
Query:  212 ESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 469
            E  V+C+++ +LP +SF +GG+ + LT   Y+L+   G+   C      LDV PP GP+W+LG  F+  ++T FD  N R+GFA A
Sbjct:  317 EYVVNCNQVPTLPDISFHLGGRAYTLTSKDYVLQDPYGNEDLCTLALHGLDVPPPTGPVWVLGASFIRKFYTEFDRHNNRIGFALA 402          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPA_CANFA (Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 1.427e-13
Identity = 38/88 (43.18%), Postives = 53/88 (60.23%), Query Frame = -3
Query:  209 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 472
            G+  + CS ++SLP + FTI G  + L P  YIL+  +G    C+SGF  +++    G LWILGDVF+  Y  VFD +N +VG A  A
Sbjct:  303 GQMVISCSAINSLPDIVFTINGIQYPLPPSAYILQSQQG----CVSGFQGMNLPTASGELWILGDVFIRQYFAVFDRANNQVGLAPVA 386          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPA_BOVIN (Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2)

HSP 1 Score: 75.8702 bits (185), Expect = 3.179e-13
Identity = 38/88 (43.18%), Postives = 50/88 (56.82%), Query Frame = -3
Query:  209 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 472
            GE  + CS + SLP + FTI G  + + P  YIL+        C SGF  +D++   G LWILGDVF+  Y TVFD  N ++G A  A
Sbjct:  289 GEVVISCSSIDSLPDIVFTINGVQYPVPPSAYILQSN----GICSSGFEGMDISTSSGDLWILGDVFIRQYFTVFDRGNNQIGLAPVA 372          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPA1_RABIT (Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 3.179e-13
Identity = 39/89 (43.82%), Postives = 53/89 (59.55%), Query Frame = -3
Query:  209 MGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 475
            +GE+ + CS + SLP + FTI    + L    YILK  +     C+SGF  +++    G LWILGDVF+  Y TVFD +N +VG A AA
Sbjct:  303 LGENIISCSAIDSLPDIVFTINNVQYPLPASAYILKEDD----DCLSGFDGMNLDTSYGELWILGDVFIRQYFTVFDRANNQVGLAAAA 387          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: RENI2_MOUSE (Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.152e-13
Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = -3
Query:  212 ESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 469
            E  V CS++ +LP +SF +GG+ + L+   Y+L+        C     A+D+ PP GP+W+LG  F+  ++T FD  N R+GFA A
Sbjct:  315 EYVVSCSQVPTLPDISFNLGGRAYTLSSTDYVLQYPNRRDKLCTVALHAMDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALA 400          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: RENI1_MOUSE (Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 4.152e-13
Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = -3
Query:  212 ESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 469
            E  V+CS++ +LP +SF +GG+ + L+   Y+L+        C     A+D+ PP GP+W+LG  F+  ++T FD  N R+GFA A
Sbjct:  316 EYVVNCSQVPTLPDISFDLGGRAYTLSSTDYVLQYPNRRDKLCTLALHAMDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALA 401          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPC_RABIT (Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.423e-13
Identity = 42/89 (47.19%), Postives = 51/89 (57.30%), Query Frame = -3
Query:  209 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRG-PLWILGDVFMGPYHTVFDYSNMRVGFAEAA 472
            GE  VDC    SLP  +F I G  F L+P  YIL        QC+ G  A  ++   G PLWILGDVF+  Y++VFD +N RVGFA  A
Sbjct:  304 GEFLVDCDSTESLPTFTFVINGVEFPLSPSAYILNTD----GQCMVGVEATYLSSQDGEPLWILGDVFLRAYYSVFDMANNRVGFAALA 388          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPC_CAVPO (Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.423e-13
Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = -3
Query:  209 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRG-PLWILGDVFMGPYHTVFDYSNMRVGFAEAA 472
            GE  V CS +  LP ++F I G  F L+P  YIL  GE     C+ G  +  V+P  G P+WILGDVF+  Y++V+D +N RVGFA AA
Sbjct:  310 GEYFVSCSSIQDLPTLTFVISGVEFPLSPSAYILS-GEN---YCMVGLESTYVSPGGGEPVWILGDVFLRSYYSVYDLANNRVGFATAA 394          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPA3_RABIT (Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 9.250e-13
Identity = 42/88 (47.73%), Postives = 54/88 (61.36%), Query Frame = -3
Query:  209 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 472
            GE  V CS + SLP + FTI G  + +    YIL+  E DA  CISGF  +++    G LWILGDVF+  Y TVFD +N ++G A AA
Sbjct:  304 GEMIVSCSSMYSLPNIVFTINGVQYPVPASAYILE--EDDA--CISGFEGMNLDTYTGELWILGDVFIRQYFTVFDRANNQLGLAAAA 387          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPC_MOUSE (Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.208e-12
Identity = 41/102 (40.20%), Postives = 57/102 (55.88%), Query Frame = -3
Query:  218 YVNELCDRLPSPMGESA---VDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRG-PLWILGDVFMGPYHTVFDYSNMRVGFA 511
            Y+NEL   + +  GE     V C  +SSLP ++F + G  F L+P  YI++    +   C+ G  +L +    G PLWILGDVF+  Y+ VFD  N RVG A
Sbjct:  292 YLNELLQTIGAQEGEYGQYFVSCDSVSSLPTLTFVLNGVQFPLSPSSYIIQ----EEGSCMVGLESLSLNAESGQPLWILGDVFLRSYYAVFDMGNNRVGLA 389          
The following BLAST results are available for this feature:
BLAST of CF832146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
RENI_CANFA1.427e-1340.70Renin OS=Canis familiaris GN=REN PE=2 SV=1[more]
PEPA_CANFA1.427e-1343.18Pepsin A OS=Canis familiaris GN=PGA PE=2 SV=1[more]
PEPA_BOVIN3.179e-1343.18Pepsin A OS=Bos taurus GN=PGA PE=1 SV=2[more]
PEPA1_RABIT3.179e-1343.82Pepsin II-1 OS=Oryctolagus cuniculus PE=2 SV=1[more]
RENI2_MOUSE4.152e-1338.37Renin-2 OS=Mus musculus GN=Ren2 PE=1 SV=1[more]
RENI1_MOUSE4.152e-1338.37Renin-1 OS=Mus musculus GN=Ren1 PE=1 SV=1[more]
PEPC_RABIT5.423e-1347.19Gastricsin OS=Oryctolagus cuniculus GN=PGC PE=2 SV... [more]
PEPC_CAVPO5.423e-1347.19Gastricsin OS=Cavia porcellus GN=PGC PE=2 SV=1[more]
PEPA3_RABIT9.250e-1347.73Pepsin-3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPC_MOUSE1.208e-1240.20Gastricsin OS=Mus musculus GN=Pgc PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01G07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832146 ID=CF832146; Name=CF832146; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTTTTTTTTTTTGCACAAACCCAATAAGAGTCCAGGCACCCATTT
ATAAACAAAGTCCAACGTCTTGGGCTTCTCAACAGCTGTCATACATCAGA
GCATTTACATAGAACAGTTATTTAAGGTTTAGTTTCAACATCTTAAAGAA
ACAACTGAAATTCCACGAGGTACGGTTCACTGAGCATAATTTAAAACAAA
CTTATTTACGCGGCTTCAGCAAATCCCACTCTCATGTTGCTGTAGTCAAA
GACTGTGTGGTAGGGACCCATAAAAACATCCCCCAAGATCCAGAGAGGTC
CACGTGGTGGGGCAACATCTAGAGCTGAGAATCCACTTATACATTGAGCT
GCATCTCCCTCGCCCACTTTGAGGATGTACTGATCAGGAGTAAGGTCAAA
TATCTTTCCACCAATCGTAAAGGAAACAATAGGCAAGGAAGACAATCTGC
TACAGTCAACAGCCGATTCTCCCATAGGACTAGGCAACCGATCACAGAGC
TCATTGACATAGTTAAGAATGCGCTCTTGTGTTTGGTTCTGCTTGAGCTG
GTTCTGCATCCACACAACTGCCATCTCACAAGTAGAGCACATTGCATCAT
GGAAACCACCAGATGCTCTATGATTATTCTCAGGAACGACACTCTCAATG
CCCATACTCACACCTCGAGACCCATCAAATGTGCACAAACCAATCTGTGA
GCAAATTTTTTGAGGTTCATCCTTAGCTAAAAGCATATTGATGATCTCCT
CTCCATATTGTGAAACTACAGCCTTGCATTCTTGACTGACAATTCCAGTG
GCTCCAATGGCATGGTTGACTTGAGTTATGATGG
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