CF832146

Overview
NameCF832146
Unique NameCF832146
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length834
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10427 contig Csv1_Contig10427:1093..1922. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPA_CALJA (Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 1.208e-12
Identity = 39/88 (44.32%), Postives = 50/88 (56.82%), Query Frame = -3
Query:  209 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 472
            GE  V CS +SSLP + FTI G  + +    YIL+    D   C SGF  +++    G LWILGDVF+  Y  VFD +N +VG A  A
Sbjct:  304 GEMVVSCSAISSLPDIVFTINGIQYPVPASAYILQ----DEGGCTSGFQGMNIPTAYGELWILGDVFIRQYFAVFDRANNQVGLAPVA 387          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEP2B_GADMO (Pepsin-2B OS=Gadus morhua PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.061e-12
Identity = 39/88 (44.32%), Postives = 51/88 (57.95%), Query Frame = -3
Query:  209 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEAA 472
            GE   +C+ + SLP ++FTI G    L P  YI    EGD A C SG  +  V      LWI GDVF+  Y+T++D +N +VGFA AA
Sbjct:  241 GEMMGNCASVQSLPDITFTINGVKQPLPPSAYI----EGDQAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: RENI_SHEEP (Renin OS=Ovis aries GN=REN PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.691e-12
Identity = 33/86 (38.37%), Postives = 53/86 (61.63%), Query Frame = -3
Query:  212 ESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 469
            E  V+C+++ +LP +SF +GGK + LT   Y+L+    + + C      +D+ PP GP+W+LG  F+  ++T FD  N R+GFA A
Sbjct:  315 EYVVNCNQMPTLPDISFHLGGKAYTLTSADYVLQDPYNNIS-CTLALHGMDIPPPTGPVWVLGATFIRKFYTEFDRRNNRIGFALA 399          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPA4_RABIT (Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.691e-12
Identity = 38/88 (43.18%), Postives = 51/88 (57.95%), Query Frame = -3
Query:  212 MGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 475
            +GE+ + CS + SLP + FTI G  + L    YILK  +     C SG   ++V    G LWILGDVF+  Y TVFD +N ++G A A
Sbjct:  303 LGENVISCSAIDSLPDIVFTINGIQYPLPASAYILKEDD----DCTSGLEGMNVDTYTGELWILGDVFIRQYFTVFDRANNQLGLAAA 386          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPA2_RABIT (Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.691e-12
Identity = 38/88 (43.18%), Postives = 51/88 (57.95%), Query Frame = -3
Query:  212 MGESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 475
            +GE+ + CS + SLP + FTI G  + L    YILK  +     C SG   ++V    G LWILGDVF+  Y TVFD +N ++G A A
Sbjct:  303 LGENVISCSAIDSLPDIVFTINGIQYPLPASAYILKEDD----DCTSGLEGMNVDTYTGELWILGDVFIRQYFTVFDRANNQLGLAAA 386          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: CATE_CAVPO (Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1)

HSP 1 Score: 72.7886 bits (177), Expect = 2.691e-12
Identity = 36/84 (42.86%), Postives = 48/84 (57.14%), Query Frame = -3
Query:  212 AVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 463
            +V C+ L+ +  V+F I G  + L P  Y L         C +GF  L++ PP GPLWILGDVF+  ++ VFD  N RVG A A
Sbjct:  306 SVQCANLNMMLDVTFIINGVPYTLNPTAYTLLDFVDGMQVCSTGFEGLEIQPPAGPLWILGDVFIRQFYAVFDRGNNRVGLAPA 389          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: RENI_RAT (Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2)

HSP 1 Score: 72.4034 bits (176), Expect = 3.515e-12
Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = -3
Query:  212 VDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 460
            V+CS++ +LP +SF +GG+ + L+   Y+ K    +   CI     LD+ PP GP+W+LG  F+  ++T FD  N R+GFA A
Sbjct:  319 VNCSQVPTLPDISFYLGGRTYTLSNMDYVQKNPFRNDDLCILALQGLDIPPPTGPVWVLGATFIRKFYTEFDRHNNRIGFALA 401          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPC_SORUN (Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 7.830e-12
Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = -3
Query:  209 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRG-PLWILGDVFMGPYHTVFDYSNMRVGFAEAA 472
            G+  V+C+ + +LP ++F I G  F L P  Y+L     +   C  G     +  P G PLWILGDVF+  Y++V+D  N RVGFA AA
Sbjct:  305 GQMVVNCNNIQNLPTLTFVINGVQFPLLPSAYVLN----NNGYCTLGVEPTYLPSPTGQPLWILGDVFLRSYYSVYDMGNNRVGFATAA 389          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: PEPC_SUNMU (Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 1.023e-11
Identity = 38/89 (42.70%), Postives = 50/89 (56.18%), Query Frame = -3
Query:  209 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRG-PLWILGDVFMGPYHTVFDYSNMRVGFAEAA 472
            G+ AV+C+ + SLP ++F I G  F L P  Y+L         C  G     +    G PLWILGDVF+  Y++V+D  N RVGFA AA
Sbjct:  305 GQLAVNCNSIQSLPTLTFIINGVQFPLPPSAYVLNTN----GYCFLGVEPTYLPSQNGQPLWILGDVFLRSYYSVYDMGNNRVGFATAA 389          
BLAST of CF832146 vs. ExPASy Swiss-Prot
Match: CARP_NEUCR (Vacuolar protease A OS=Neurospora crassa GN=pep-4 PE=3 SV=2)

HSP 1 Score: 69.707 bits (169), Expect = 2.278e-11
Identity = 35/87 (40.23%), Postives = 51/87 (58.62%), Query Frame = -3
Query:  212 GESAVDCSRLSSLPIVSFTIGGKIFDLTPDQYILKVGEGDAAQCISGFSALDVAPPRGPLWILGDVFMGPYHTVFDYSNMRVGFAEA 472
            G+  +DC + SSL  V+FT+ G  F L P+ YIL+     +  C+S F  +D+  P GPL ILGD F+  Y++++D     VG A A
Sbjct:  312 GQFTIDCGKKSSLEDVTFTLAGYNFTLGPEDYILEA----SGSCLSTFMGMDMPAPVGPLAILGDAFLRKYYSIYDLGADTVGIATA 394          
The following BLAST results are available for this feature:
BLAST of CF832146 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 71
Match NameE-valueIdentityDescription
PEPA_CALJA1.208e-1244.32Pepsin A OS=Callithrix jacchus GN=PGA PE=1 SV=1[more]
PEP2B_GADMO2.061e-1244.32Pepsin-2B OS=Gadus morhua PE=1 SV=1[more]
RENI_SHEEP2.691e-1238.37Renin OS=Ovis aries GN=REN PE=2 SV=1[more]
PEPA4_RABIT2.691e-1243.18Pepsin II-4 OS=Oryctolagus cuniculus PE=2 SV=1[more]
PEPA2_RABIT2.691e-1243.18Pepsin II-2/3 OS=Oryctolagus cuniculus PE=2 SV=1[more]
CATE_CAVPO2.691e-1242.86Cathepsin E OS=Cavia porcellus GN=CTSE PE=1 SV=1[more]
RENI_RAT3.515e-1239.76Renin OS=Rattus norvegicus GN=Ren1 PE=2 SV=2[more]
PEPC_SORUN7.830e-1241.57Gastricsin OS=Sorex unguiculatus GN=PGC PE=2 SV=1[more]
PEPC_SUNMU1.023e-1142.70Gastricsin OS=Suncus murinus GN=PGC PE=1 SV=2[more]
CARP_NEUCR2.278e-1140.23Vacuolar protease A OS=Neurospora crassa GN=pep-4 ... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01G07_f Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01G07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832146 ID=CF832146; Name=CF832146; organism=Citrus sinensis; type=EST; length=834bp
TTTTTTTTTTTTTTTTTGCACAAACCCAATAAGAGTCCAGGCACCCATTT
ATAAACAAAGTCCAACGTCTTGGGCTTCTCAACAGCTGTCATACATCAGA
GCATTTACATAGAACAGTTATTTAAGGTTTAGTTTCAACATCTTAAAGAA
ACAACTGAAATTCCACGAGGTACGGTTCACTGAGCATAATTTAAAACAAA
CTTATTTACGCGGCTTCAGCAAATCCCACTCTCATGTTGCTGTAGTCAAA
GACTGTGTGGTAGGGACCCATAAAAACATCCCCCAAGATCCAGAGAGGTC
CACGTGGTGGGGCAACATCTAGAGCTGAGAATCCACTTATACATTGAGCT
GCATCTCCCTCGCCCACTTTGAGGATGTACTGATCAGGAGTAAGGTCAAA
TATCTTTCCACCAATCGTAAAGGAAACAATAGGCAAGGAAGACAATCTGC
TACAGTCAACAGCCGATTCTCCCATAGGACTAGGCAACCGATCACAGAGC
TCATTGACATAGTTAAGAATGCGCTCTTGTGTTTGGTTCTGCTTGAGCTG
GTTCTGCATCCACACAACTGCCATCTCACAAGTAGAGCACATTGCATCAT
GGAAACCACCAGATGCTCTATGATTATTCTCAGGAACGACACTCTCAATG
CCCATACTCACACCTCGAGACCCATCAAATGTGCACAAACCAATCTGTGA
GCAAATTTTTTGAGGTTCATCCTTAGCTAAAAGCATATTGATGATCTCCT
CTCCATATTGTGAAACTACAGCCTTGCATTCTTGACTGACAATTCCAGTG
GCTCCAATGGCATGGTTGACTTGAGTTATGATGG
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