CF832149
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_EMENI (40S ribosomal protein S19 OS=Emericella nidulans GN=rps19 PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 3.078e-34 Identity = 70/131 (53.44%), Postives = 90/131 (68.70%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELD-SKGGRRITSSGQRDLDQVA 410 V+DV +F+ AYAA LKR GK+ +P W D VKT EL P D DWYY+RAA++AR IYLR +GVG R+++G K GSRP H +SG+V R +L L+ ++E D KGGRRIT SGQRDLD++A Sbjct: 6 VRDVDAQKFIVAYAAFLKRQGKLPIPGWVDTVKTSASNELPPQDADWYYVRAAAVARHIYLRKTVGVGRLRKVHGSTKNRGSRPAHHVDASGAVDRKVLQSLEKIGVLEQDEEKGGRRITQSGQRDLDRIA 136
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19S_ASCSU (40S ribosomal protein S19S OS=Ascaris suum GN=RPS19S PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 4.020e-34 Identity = 67/135 (49.63%), Postives = 94/135 (69.63%), Query Frame = 3 Query: 18 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG-GRRITSSGQRDLDQVAGRI 419 +VKDV HE V+ A LK+SGK+++P W+D+VK G KELAP D DWYY+R AS+AR++Y+R GVG+ RR+YGG KR G P HF+++SGSV R L L+ +E G GR +T G++DLD++A ++ Sbjct: 6 SVKDVDQHEIVRYIAGFLKKSGKVKVPEWSDLVKLGITKELAPVDSDWYYVRTASVARRLYIRSPTGVGALRRVYGGNKRRGVTPNHFARASGSVIRKALQTLEAIKWVEKHPDGNGRILTKQGRKDLDRIASQM 140
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19A_DROME (40S ribosomal protein S19a OS=Drosophila melanogaster GN=RpS19a PE=2 SV=3) HSP 1 Score: 142.895 bits (359), Expect = 1.170e-33 Identity = 66/133 (49.62%), Postives = 89/133 (66.92%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRI 419 VKD+ H KA A LK++GK+++P DIVKT KELAPYDPDW+Y+R AS+ R +Y R GVGS +IYGG KRNG P HF +++ AR L L+ ++E GGR+++S GQRDLD++A +I Sbjct: 6 VKDIDQHAVTKAVAVFLKKTGKLKVPDQMDIVKTAKFKELAPYDPDWFYVRCASILRHLYHRSPAGVGSITKIYGGRKRNGVHPSHFCRAADGAARKALQALEHARLVEKHPDGGRKLSSIGQRDLDRIANQI 138
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_ENTHI (40S ribosomal protein S19 OS=Entamoeba histolytica GN=RPS19 PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 4.915e-32 Identity = 67/138 (48.55%), Postives = 91/138 (65.94%), Query Frame = 3 Query: 3 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGR 416 M N+KDV +F+KAYA HLK+SGK+E+P W D VKTG KELAP +PDW YIRAA++ARK+YL G+GV + RR YG P H + SG V R+IL QL+ I+ + GR +T G++D+D++A + Sbjct: 1 MHHFSNIKDVVAIDFIKAYAEHLKKSGKLEIPEWVDTVKTGMCKELAPLNPDWIYIRAAAIARKVYLNNGIGVMALRRAYGDQYNKHYYPSHRTLGSGKVNRYILQQLEKMGIVG-KIQSGRSLTKEGRKDMDKIASK 137
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19G_ASCSU (40S ribosomal protein S19G OS=Ascaris suum GN=RPS19G PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.868e-31 Identity = 65/140 (46.43%), Postives = 93/140 (66.43%), Query Frame = 3 Query: 3 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG-GRRITSSGQRDLDQVAGRI 419 M A +VKDV HE V+ A LK+SGK+++P W+D+ K G KELAP + DWYY+R AS+AR++Y+R GV + R +YGG KR G P HF+K+SGSV R L L+ ++ G GR +T G++DLD++A ++ Sbjct: 1 MVKATSVKDVDQHEIVQHIAKFLKKSGKVKVPEWSDVTKMGISKELAPLNSDWYYVRTASIARRLYVRSPTGVDALRLVYGGSKRRGVVPNHFAKASGSVIRKALQTLEAIKWVQKHPDGNGRVLTKQGRKDLDRIASQM 140
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19_CAEEL (40S ribosomal protein S19 OS=Caenorhabditis elegans GN=rps-19 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 2.439e-31 Identity = 64/137 (46.72%), Postives = 92/137 (67.15%), Query Frame = 3 Query: 3 METAKNVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKG-GRRITSSGQRDLDQVA 410 M A ++KDV HE K+ A LK+SGK+++P W+D+VK G KELAP DPDW+Y RAAS+AR +Y R G+G+F+++YGG KR G P HF S+G+ R + QL+ +E G GR ++ G++DLD++A Sbjct: 1 MTRATSIKDVDQHEATKSIAHFLKKSGKVKVPEWSDLVKLGVNKELAPVDPDWFYTRAASLARHLYFRPA-GIGAFKKVYGGNKRRGVAPNHFQTSAGNCLRKAVQQLEKIKWVEKHPDGKGRILSKQGRKDLDRIA 136
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19B_YEAST (40S ribosomal protein S19-B OS=Saccharomyces cerevisiae GN=RPS19B PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.065e-30 Identity = 63/134 (47.01%), Postives = 93/134 (69.40%), Query Frame = 3 Query: 18 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPD-WYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGR 416 +V+DV+ +F+ AYA+ L+R GK+E+P + DIVKT + E+ P D + W+Y RAAS+AR IY+R +GVG ++YGG K G RP +SGS+ R +L L+ I+E+ KGGRRI+ +GQRDLD++A + Sbjct: 5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIAAQ 138
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19A_YEAST (40S ribosomal protein S19-A OS=Saccharomyces cerevisiae GN=RPS19A PE=1 SV=2) HSP 1 Score: 132.109 bits (331), Expect = 2.065e-30 Identity = 63/134 (47.01%), Postives = 93/134 (69.40%), Query Frame = 3 Query: 18 NVKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPD-WYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGR 416 +V+DV+ +F+ AYA+ L+R GK+E+P + DIVKT + E+ P D + W+Y RAAS+AR IY+R +GVG ++YGG K G RP +SGS+ R +L L+ I+E+ KGGRRI+ +GQRDLD++A + Sbjct: 5 SVRDVAAQDFINAYASFLQRQGKLEVPGYVDIVKTSSGNEMPPQDAEGWFYKRAASVARHIYMRKQVGVGKLNKLYGGAKSRGVRPYKHIDASGSINRKVLQALEKIGIVEISPKGGRRISENGQRDLDRIAAQ 138
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19B_DROME (40S ribosomal protein S19b OS=Drosophila melanogaster GN=RpS19b PE=1 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 5.623e-28 Identity = 61/133 (45.86%), Postives = 82/133 (61.65%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRI 419 VK++ H K AA LK+SGKI +P +KTG KE AP D DW+Y R AS+ R +YLR GVG+F ++Y G KRNG RP +SS R L L+ N++E GGR++T GQR+LD++A +I Sbjct: 6 VKEIDQHVLTKNMAAFLKKSGKIFVPEQAVYMKTGKFKETAPTDDDWFYTRCASIMRHLYLRSPAGVGAFTKVYSGRKRNGVRPSKHCRSSDGCIRKALQALEAANMVERHPDGGRKLTPQGQRNLDRIANKI 138
BLAST of CF832149 vs. ExPASy Swiss-Prot
Match: RS19E_METTH (30S ribosomal protein S19e OS=Methanobacterium thermoautotrophicum GN=rps19e PE=3 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 8.402e-24 Identity = 54/133 (40.60%), Postives = 80/133 (60.15%), Query Frame = 3 Query: 21 VKDVSPHEFVKAYAAHLKRSGKIELPTWNDIVKTGTLKELAPYDPDWYYIRAASMARKIYLRGGLGVGSFRRIYGGGKRNGSRPPHFSKSSGSVARHILHQLQDTNIIELDSKGGRRITSSGQRDLDQVAGRI 419 V DV + A LK K++ P W + VKTG KE P +PDW+Y+RAA++ R++Y+ G +GV S R YGG K GSRP F + SG++ R L QL+++ +I+ + + GR IT G+ LD+ A + Sbjct: 4 VYDVPADLLINRVAEELKNDSKVKSPEWVNFVKTGVHKERRPENPDWWYVRAAALLRRVYIDGPVGVNSLRTHYGGKKDRGSRPEKFRRGSGAIIRRALQQLEESGLIKRE-ENGRVITPEGRSFLDKAAAEV 135 The following BLAST results are available for this feature:
BLAST of CF832149 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 37
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832149 ID=CF832149; Name=CF832149; organism=Citrus sinensis; type=EST; length=599bpback to top |