CF832173

Overview
NameCF832173
Unique NameCF832173
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length694
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig10550 contig Csv1_Contig10550:364..1057. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832173 vs. ExPASy Swiss-Prot
Match: PMM_ENCCU (Phosphomannomutase OS=Encephalitozoon cuniculi GN=SEC53 PE=1 SV=1)

HSP 1 Score: 142.51 bits (358), Expect = 2.014e-33
Identity = 67/125 (53.60%), Postives = 89/125 (71.20%), Query Frame = -3 
Query:  324 RGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLNLTFSIGGQISFDVFPQGWDKTYCLRYL--DDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEK 692
            RG FIE+R+ M+NISPIGRNCS+EER +F   DK    R KMV+ +R++F    L FSIGGQIS D FP+GWDKTYCLR++  +    ++FFGD T +GGND+EI+  +   G +V +P+DT  K
Sbjct:  116 RGNFIEYRNSMINISPIGRNCSREERMKFFELDKKEKFREKMVTAMRDRFKDSCLVFSIGGQISIDCFPKGWDKTYCLRHIKKEGVENVYFFGDMTMEGGNDYEIYNHKDVHGISVGNPDDTYRK 240
[Close]
BLAST of CF832173 vs. ExPASy Swiss-Prot
Match: PMM_BABBO (Phosphomannomutase OS=Babesia bovis GN=PMM PE=2 SV=1)

HSP 1 Score: 125.176 bits (313), Expect = 3.328e-28
Identity = 62/133 (46.62%), Postives = 86/133 (64.66%), Query Frame = -3 
Query:  300 RGTFIEFRSGMLNISPIGRNCSQEERDEFERYDKIHNIRPKMVSVLREKFAHLN--LTFSIGGQISFDVFPQGWDKTYCLRYLDDFNEIHFFGDKTYKGGNDHEIFESERTVGHTVTSPEDTMEKCKALFLAK 692
            RGTFIE R  ++NI P GRNCS  +R  F  YD IH++R K++ VL+ +F   +  L+F  GGQIS DV+P+ W K+  L ++   + IHFFGD T +GGND EI+     +GHTVT  +D + + + L LAK
Sbjct:  114 RGTFIEHRKSLINICPPGRNCSMVDRRRFVEYDSIHHVRQKLIQVLKSQFDSDDCPLSFVAGGQISIDVYPKAWSKSIALSHIGKCDVIHFFGDNTREGGNDFEIYNHPDVIGHTVTGYKDLVNQLEEL-LAK 245
The following BLAST results are available for this feature:
BLAST of CF832173 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
PMM_ENCCU2.014e-3353.60Phosphomannomutase OS=Encephalitozoon cuniculi GN=... [more]
PMM_BABBO3.328e-2846.62Phosphomannomutase OS=Babesia bovis GN=PMM PE=2 SV... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01G23_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01G23, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832173 ID=CF832173; Name=CF832173; organism=Citrus sinensis; type=EST; length=694bp
TTTTTTTTTAACGATATTTGTTTATTGGATTATGAAACGATATATTATAG
TGCTCATGTGCAGGTTTTTGCTGCCGCTACCGTGTTTTTAACGGAGATTT
TGCACTCCTACATCCAGCATGCAGGAACTTACCCCGCGATCAAACAACCG
CAACATATCCATACATCAAATACAACGAATCCAATTGGCAAATGCCTTTC
TCAATTGATCAAATAAAATTACATTGAATTGCTCGCATTAGAAATACGAA
TTATTCTCTCGTGTTTGTAGACTTACTATAACTTCTCCCAAATTCACGGT
TTAGCCAGGAAGAGAGCCTTACACTTTTCCATAGTATCCTCAGGGCTGGT
AACTGTGTGACCCACTGTTCGCTCGGATTCAAAAATTTCATGATCATTCC
CTCCCTTGTAAGTTTTGTCCCCAAAAAAGTGAATTTCATTGAAGTCATCA
AGGTATCTCAAGCAGTATGTCTTGTCCCATCCCTGGGGAAACACATCAAA
GCTTATCTGTCCTCCAATTGAAAATGTCAAGTTAAGGTGAGCAAACTTCT
CCCGAAGCACAGATACCATTTTTGGCCGTATATTGTGAATCTTGTCATAC
CTCTCAAACTCGTCCCTTTCTTCTTGGCTGCAGTTTCGCCCAATTGGTGA
AATATTAAGCATCCCACTTCGGAATTCAATGAAAGTTCCCCTTT
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