CF832189

Overview
NameCF832189
Unique NameCF832189
TypeEST
OrganismCitrus sinensis (Sweet orange)
Sequence length759
Libraries
Library NameType
Ruby Orange Ovary at Anthesis cDNA Librarycdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Csv1_Contig7281 contig Csv1_Contig7281:29..787. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ACT8_ARATH (Actin-8 OS=Arabidopsis thaliana GN=ACT8 PE=1 SV=2)

HSP 1 Score: 428.713 bits (1101), Expect = 1.653e-119
Identity = 207/221 (93.67%), Postives = 217/221 (98.19%), Query Frame = 2 
Query:   95 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYV 757
            MADA+DIQP+VCDNGTGMVKAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKDAYVGDEAQSKRGILTLKYPIEHG+VSNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTD LMKILTERGYMFTTTAEREIVRD+KEKL++V
Sbjct:    1 MADADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFV 221
[Close]
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ACT7_ORYSJ (Actin-7 OS=Oryza sativa subsp. japonica GN=ACT7 PE=3 SV=1)

HSP 1 Score: 427.172 bits (1097), Expect = 4.809e-119
Identity = 208/217 (95.85%), Postives = 213/217 (98.16%), Query Frame = 2 
Query:  107 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYV 757
            EDIQP+VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP+NPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG+ LPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKLAYV
Sbjct:    4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFTLPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDIKEKLAYV 220
[Close]
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ACT7_ORYSI (Actin-7 OS=Oryza sativa subsp. indica GN=ACT7 PE=3 SV=1)

HSP 1 Score: 427.172 bits (1097), Expect = 4.809e-119
Identity = 208/217 (95.85%), Postives = 213/217 (98.16%), Query Frame = 2 
Query:  107 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYV 757
            EDIQP+VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAP+NPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG+ LPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKLAYV
Sbjct:    4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKMTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFTLPHAILRLDLAGRDLTDNLMKILTERGYSFTTTAEREIVRDIKEKLAYV 220
[Close]
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ACT2_ARATH (Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1)

HSP 1 Score: 427.172 bits (1097), Expect = 4.809e-119
Identity = 206/221 (93.21%), Postives = 217/221 (98.19%), Query Frame = 2 
Query:   95 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYV 757
            MA+A+DIQP+VCDNGTGMVKAGFAGDDAPRAVFPS+VGRPRH GVMVGM QKDAYVGDEAQSKRGILTLKYPIEHG+VSNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEG++LPHAILRLDLAGRDLTD LMKILTERGYMFTTTAEREIVRD+KEKL++V
Sbjct:    1 MAEADDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSVVGRPRHHGVMVGMNQKDAYVGDEAQSKRGILTLKYPIEHGVVSNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGFSLPHAILRLDLAGRDLTDYLMKILTERGYMFTTTAEREIVRDIKEKLSFV 221
[Close]
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ACT_COLSC (Actin OS=Coleochaete scutata PE=2 SV=1)

HSP 1 Score: 424.861 bits (1091), Expect = 2.387e-118
Identity = 207/221 (93.67%), Postives = 215/221 (97.29%), Query Frame = 2 
Query:   95 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYV 757
            MAD E++  LVCDNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETF+VPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD +MKILTERGY FTTTAEREIVRD+KEKLAYV
Sbjct:    1 MADGEEVSALVCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYAFTTTAEREIVRDIKEKLAYV 221
[Close]
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ACT6_SOLTU (Actin-71 OS=Solanum tuberosum GN=AC71 PE=3 SV=2)

HSP 1 Score: 424.476 bits (1090), Expect = 3.117e-118
Identity = 207/221 (93.67%), Postives = 214/221 (96.83%), Query Frame = 2 
Query:   95 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYV 757
            MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDAYV DEAQSKRGILTLKYP EHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT+ ++KILTERGY FTTTAE+EIVRD+KEKLAY+
Sbjct:    1 MADVEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHAGVMVGMGQKDAYVVDEAQSKRGILTLKYPXEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTEYMVKILTERGYSFTTTAEKEIVRDVKEKLAYL 221
[Close]
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ACT_MESVI (Actin OS=Mesostigma viride PE=3 SV=1)

HSP 1 Score: 423.32 bits (1087), Expect = 6.944e-118
Identity = 207/221 (93.67%), Postives = 214/221 (96.83%), Query Frame = 2 
Query:   95 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYV 757
            MAD  ++  L+CDNG+GMVKAGFAGDDAPRAVFPSIVGRPRH GVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKLAYV
Sbjct:    1 MADEGEVSALMCDNGSGMVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYV 221
[Close]
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ACT22_DICDI (Putative actin-22 OS=Dictyostelium discoideum GN=act22 PE=3 SV=1)

HSP 1 Score: 421.009 bits (1081), Expect = 3.446e-117
Identity = 205/219 (93.61%), Postives = 212/219 (96.80%), Query Frame = 2 
Query:  101 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYV 757
            D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD +MKILTERGY FTTTAEREIVRD+KEKLAYV
Sbjct:    2 DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYV 220
[Close]
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ACT1_DICDI (Major actin OS=Dictyostelium discoideum GN=act1 PE=1 SV=2)

HSP 1 Score: 421.009 bits (1081), Expect = 3.446e-117
Identity = 205/219 (93.61%), Postives = 212/219 (96.80%), Query Frame = 2 
Query:  101 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYV 757
            D ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD +MKILTERGY FTTTAEREIVRD+KEKLAYV
Sbjct:    2 DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYV 220
[Close]
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ACTA_PHYPO (Actin, plasmodial isoform OS=Physarum polycephalum GN=ARDA PE=1 SV=2)

HSP 1 Score: 420.239 bits (1079), Expect = 5.879e-117
Identity = 205/219 (93.61%), Postives = 212/219 (96.80%), Query Frame = 2 
Query:  101 DAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYV 757
            + ED+Q LV DNG+GM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD LMKILTERGY FTTTAEREIVRD+KEKLAYV
Sbjct:    2 EGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLAYV 220
The following BLAST results are available for this feature:
BLAST of CF832189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 477
Match NameE-valueIdentityDescription
ACT8_ARATH1.653e-11993.67Actin-8 OS=Arabidopsis thaliana GN=ACT8 PE=1 SV=2[more]
ACT7_ORYSJ4.809e-11995.85Actin-7 OS=Oryza sativa subsp. japonica GN=ACT7 PE... [more]
ACT7_ORYSI4.809e-11995.85Actin-7 OS=Oryza sativa subsp. indica GN=ACT7 PE=3... [more]
ACT2_ARATH4.809e-11993.21Actin-2 OS=Arabidopsis thaliana GN=ACT2 PE=1 SV=1[more]
ACT_COLSC2.387e-11893.67Actin OS=Coleochaete scutata PE=2 SV=1[more]
ACT6_SOLTU3.117e-11893.67Actin-71 OS=Solanum tuberosum GN=AC71 PE=3 SV=2[more]
ACT_MESVI6.944e-11893.67Actin OS=Mesostigma viride PE=3 SV=1[more]
ACT22_DICDI3.446e-11793.61Putative actin-22 OS=Dictyostelium discoideum GN=a... [more]
ACT1_DICDI3.446e-11793.61Major actin OS=Dictyostelium discoideum GN=act1 PE... [more]
ACTA_PHYPO5.879e-11793.61Actin, plasmodial isoform OS=Physarum polycephalum... [more]

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Properties
Property NameValue
Genbank descriptionUCRCS02_01H10_r Ruby Orange Ovary at Anthesis cDNA Library Citrus sinensis cDNA clone CS_REa01H10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>CF832189 ID=CF832189; Name=CF832189; organism=Citrus sinensis; type=EST; length=759bp
CAAATACAGAGCGATAGAGAGAATCGACACTCTCAGCTAGACTCCATCTT
CGAATTTTTCTCTCGTCGTCTCTTCAATCTAACTTTTATAAAAAATGGCC
GATGCTGAGGATATTCAACCCCTTGTTTGTGACAATGGAACTGGAATGGT
GAAGGCTGGATTTGCTGGAGATGATGCTCCAAGGGCAGTATTCCCTAGTA
TTGTTGGTAGGCCTCGACACACTGGAGTCATGGTTGGAATGGGGCAGAAG
GATGCCTATGTTGGTGATGAGGCCCAATCGAAAAGAGGTATTCTTACTTT
GAAATACCCAATTGAGCACGGTATTGTAAGCAACTGGGATGATATGGAAA
AGATCTGGCATCATACCTTCTACAACGAGCTTCGTGTTGCTCCTGAAGAG
CACCCAGTGCTTCTCACTGAGGCACCTCTTAACCCCAAGGCCAACAGAGA
GAAGATGACCCAAATTATGTTTGAAACTTTCAATGTGCCAGCCATGTACG
TTGCCATCCAGGCTGTTCTATCTCTTTATGCCAGTGGTCGTACAACTGGT
ATTGTGCTGGATTCTGGTGATGGTGTGTCTCATACTGTACCAATTTATGA
GGGATATGCCCTTCCTCATGCCATTCTTCGTTTGGACTTGGCTGGTCGTG
ATCTCACTGATGCATTGATGAAGATTCTTACTGAGAGAGGTTACATGTTT
ACCACCACAGCCGAACGGGAAATTGTCCGTGACATGAAGGAGAAGCTTGC
TTATGTTGC
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