CF832189
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSJ (Actin-related protein 7 OS=Oryza sativa subsp. japonica GN=ARP7 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.894e-21 Identity = 65/185 (35.14%), Postives = 96/185 (51.89%), Query Frame = 2 Query: 113 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 661 ++ +V D G+ ++KAG A D +P V PS + + +D +GD A + + P+ G V +WD ME + ++ Y+ + +E +L TE PKA RE++ Q+MFE FNV Y + QAVLSLYA GR +G +D G G P+ EG A R D+ G DLT+ Sbjct: 1 MEAVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTN 171
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ARP7_ORYSI (Actin-related protein 7 OS=Oryza sativa subsp. indica GN=ARP7 PE=2 SV=2) HSP 1 Score: 100.908 bits (250), Expect = 7.894e-21 Identity = 65/185 (35.14%), Postives = 96/185 (51.89%), Query Frame = 2 Query: 113 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR-VAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTD 661 ++ +V D G+ ++KAG A D +P V PS + + +D +GD A + + P+ G V +WD ME + ++ Y+ + +E +L TE PKA RE++ Q+MFE FNV Y + QAVLSLYA GR +G +D G G P+ EG A R D+ G DLT+ Sbjct: 1 MEAVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVEEVV----QPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQLMFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEGAVQHIASKRFDIGGTDLTN 171
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ARP7_ARATH (Actin-related protein 7 OS=Arabidopsis thaliana GN=ARP7 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 1.031e-20 Identity = 70/184 (38.04%), Postives = 95/184 (51.63%), Query Frame = 2 Query: 113 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP-EEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 658 ++ LV D G+ +KAG A D +P + PS + R MV G A D + +TL PIE G++ +WD ME + + Y L E +L T+ PKA RE++ Q+MFETFNV Y + QAVLSLYA GR +G +D G G P+ EG A R +L G +LT Sbjct: 1 MEALVVDAGSKFLKAGAAIPDQSPAMIIPSQMKR------MVDDGSSSA---DNPTTVFEDVTLD-PIERGLIRDWDAMEDLLRYVVYTGLGWEEGNEGNILFTDPLCTPKAIREQLVQLMFETFNVSGFYASEQAVLSLYAVGRISGCTVDIGHGKIDIAPVLEGAVQHIASKRFELGGTELT 174
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ARP42_SCHPO (SWI/SNF and RSC complexes subunit arp42 OS=Schizosaccharomyces pombe GN=arp42 PE=1 SV=1) HSP 1 Score: 97.8265 bits (242), Expect = 6.683e-20 Identity = 53/182 (29.12%), Postives = 97/182 (53.30%), Query Frame = 2 Query: 107 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI--LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 646 E+I LV D G+ + G+AG+++P + PS + GV + ++ YV DE Q I + +K +GI+ +W+ W +L+V P E+ +++TE NP++ R+++ + FE +VPA Y+ QAV +A+ ++T +++D G + P+ +G + I + LAG Sbjct: 8 EEIPSLVIDPGSCWTRFGYAGEESPMTILPS------YYGVRSDVTGRNKYVVDELQIHAPIPGMEVKNGKSNGIIQDWESTLYTWERGLKEKLQVNPTEYAMMITEPSWNPQSVRQQIMEAAFEQLHVPAFYLTKQAVCVAFANSKSTALIVDIGSDNASVTPVVDGLIIRKGIFKQSLAG 183
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ARP4A_ARATH (Actin-related protein 4A OS=Arabidopsis thaliana GN=ARP4A PE=2 SV=1) HSP 1 Score: 93.9745 bits (232), Expect = 9.650e-19 Identity = 49/136 (36.03%), Postives = 76/136 (55.88%), Query Frame = 2 Query: 95 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVG---------------MGQKDAYVGDEAQS-KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 454 M +++ +V D G+ KAG+AG+DAP+AVFPS+VG G+ + G++ Y G +A + +R + + P + GIV++WD ++ +W H F N L + P EHP+LL E PLN + REK Sbjct: 1 MYGGDEVSAIVVDLGSHTCKAGYAGEDAPKAVFPSVVGAIDGNGMDIDDAANTTEDAKESDKEKGKRKLYTGSQALNFRRDQMEILSPTKDGIVTDWDMVDNVWDHAFRNCLMIDPTEHPMLLAEPPLNSQQQREK 136
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ARP6_NEUCR (Actin-like protein arp-6 OS=Neurospora crassa GN=arp-6 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.260e-18 Identity = 72/234 (30.77%), Postives = 111/234 (47.44%), Query Frame = 2 Query: 122 LVCDNGTGMVKAGFAGDDA----PRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGI--LTLKYPIEHGIVSNWDDMEKIWHHTFYNEL---RVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYAS----GRTTGIVLDS--------GDGVSHTV--PIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAY 754 LV DNG +KAGF DD PR + P+ + R RH + YVG E + + L + P+E G + NW+ ++IW F+++ + P + ++LTE P + + + QI+FE + + Y + V + Y RT +DS G SHT PI +G L AI RLD+ G+ +T+ L ++L+ R F E IV +MKE + Y Sbjct: 22 LVLDNGADTIKAGFVSDDKSDGKPR-IIPNCLARDRHRKI---------YVGSELEKCKDFSELAFRRPVEKGFIVNWEAQKEIWDREFFDDKAAQKCDPSDTRLILTEQPNSLPSLQTHCDQIVFEEYGFASYYRGLGPVFNAYRDIQSIFRTPQSTIDSPAQVILLIDSGYSHTTVTPILQGRPLHPAIRRLDVGGKLMTNYLTRLLSVR--HFDMRNEPYIVNEMKEAVCY 243
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ARP4_ASPFU (Actin-related protein 4 OS=Aspergillus fumigatus GN=arp4 PE=3 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.104e-17 Identity = 60/220 (27.27%), Postives = 100/220 (45.45%), Query Frame = 2 Query: 107 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA-QSKRGILTLKYPI-EHGIVSNWDDMEKIWHHTFYNELR--------------------------VAPEE-----HPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDAL 667 ++I +V D G +AGFAG+D P++V P+ G+ + Q+ GD+ + R L++ P+ G+V +WD EK+W ++F + L V EE P+L+TE NP REK +I E + PA Y+A VL+ +A+G+ + +V+D G P+++G L + L G ++ L Sbjct: 9 DEISAIVLDPGFSTTRAGFAGEDTPKSVIPTYYGKYTYE------AQEKLIFGDDIFVTPRPGLSIHNPMGRDGVVEDWDMAEKVWEYSFTSRLTGPKAGNPFQNGLNDVANGELPSEMEGVETEEKPLADSPLLMTECGWNPTKAREKTVEIAMEKWGTPAFYLARNGVLAAFAAGKASALVVDVGASNISVTPVHDGMILKRGVQHSPLGGDYISSQL 222
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ARP11_HUMAN (Actin-related protein 11 OS=Homo sapiens GN=ARP11 PE=2 SV=1) HSP 1 Score: 88.9669 bits (219), Expect = 3.104e-17 Identity = 45/105 (42.86%), Postives = 65/105 (61.90%), Query Frame = 2 Query: 467 MFETFNVPAMYVAIQAVLSLYASGRT--------TGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYV 757 MFE+FNVP +Y+A+QAVL+L AS + TGIV+DSGDGV+H +P+ EGY + I + +AGRD+T + ++L ER E + +KEK Y+ Sbjct: 1 MFESFNVPGLYIAVQAVLALAASWTSRQVGERTLTGIVIDSGDGVTHVIPVAEGYVIGSCIKHIPIAGRDITYFIQQLLREREVGIPPEQSLETAKAIKEKYCYI 105
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ARP6_CRYNE (Actin-like protein ARP6 OS=Cryptococcus neoformans GN=ARP6 PE=3 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.916e-17 Identity = 66/223 (29.60%), Postives = 104/223 (46.64%), Query Frame = 2 Query: 122 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRGILTLKY--PIEHGIVSNWDDMEKIWHHTFY-NELRVAPEEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVL----SLYASGR----TTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYMFTTTAEREIVRDMKEKLAYV 757 L+ DNG +KAG +G D V P+ + R R +K YVGDE + + + + Y P E G++ NWD IW F + L + P E +L+TE N E Q++FE F + + A L LY S + IV+D G +H VPI +G + + R+D+ G+ LT+ L +++ R + + +V ++E YV Sbjct: 7 LIIDNGAYEIKAGISGVDWEPRVLPNSIARSRT--------EKRVYVGDEIDNCKDLSGIVYRRPFEKGMLVNWDAERIIWDRLFSPSVLNINPTETSLLVTEPYFNLPNIAETYDQMIFEEFEFQSYFRCAPAALIPYGGLYESDQGIPPQCTIVIDMGYSYTHVVPIRDGQIVWEHVKRIDVGGKLLTNHLKHLISFR--QWNMIDQTHVVNSVREACGYV 219
BLAST of CF832189 vs. ExPASy Swiss-Prot
Match: ARP4_EMENI (Actin-related protein 4 OS=Emericella nidulans GN=arp4 PE=3 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 2.012e-16 Identity = 55/213 (25.82%), Postives = 96/213 (45.07%), Query Frame = 2 Query: 107 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA-QSKRGILTLKYPI-EHGIVSNWDDMEKIWHHTFYNELRVAP-------------------------------EEHPVLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAG 646 +++ +V D G +AGFAG+D P+++ P+ G+ GQ+ GD+ + R L++ P+ G+V +WD EK+W ++F + L A + P+L++E NP REK +I E + PA Y+A VL+ +A+G+ + +V+D G P+++G L + L G Sbjct: 15 DEVSAIVLDPGFSTTRAGFAGEDTPKSLVPTYYGKYSFE------GQEKLIFGDDVFVTPRPSLSVGNPMGRDGVVEDWDMAEKLWEYSFTSRLTGAKPSNPLHNGLNDLVEGELPTEMEGVETNEKPLADSPLLMSECSWNPTKAREKTIEIAMEKWGTPAFYLARNGVLASFAAGKASALVVDIGASNISVTPVHDGMVLKRGVQHSPLGG 221 The following BLAST results are available for this feature:
BLAST of CF832189 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 477
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Sequences
The
following sequences are available for this feature:
EST sequence >CF832189 ID=CF832189; Name=CF832189; organism=Citrus sinensis; type=EST; length=759bpback to top |